Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025594 Vanilla planifolia HOM05D000404 ORTHO05D430662 3.1e-78 295.0 146 100.0
HPP92_025579 Vanilla planifolia HOM05D000404 ORTHO05D001765 1.2e-71 273.1 153 90.2
HPP92_025590 Vanilla planifolia HOM05D000404 ORTHO05D001765 2.5e-19 99.4 53 92.5
MELO3C006362.2 Cucumis melo HOM05D000404 ORTHO05D001765 1.6e-18 96.7 157 40.8
CsaV3_3G011520 Cucumis sativus L. HOM05D000404 ORTHO05D001765 2.1e-18 96.3 157 40.8
Lalb_Chr24g0398421 Lupinus albus HOM05D000404 ORTHO05D001765 6.1e-18 94.7 154 37.0
MBI07_g08901_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 6.1e-18 94.7 162 41.4
ClCG05G003840 Citrullus lanatus HOM05D000404 ORTHO05D001765 2.3e-17 92.8 157 40.1
Eucgr.H02879 Eucalyptus grandis HOM05D000404 ORTHO05D001765 3.0e-17 92.4 163 38.7
Peaxi162Scf00125g01022 Petunia axillaris HOM05D000404 ORTHO05D001765 8.8e-17 90.9 157 37.6
TAR365G1221 Trochodendron aralioides HOM05D000404 ORTHO05D001765 1.1e-16 90.5 166 38.6
CiPaw.01G174900 Carya illinoinensis HOM05D000404 ORTHO05D001765 1.5e-16 90.1 160 40.0
FAN22G2386 Fragaria x ananassa HOM05D000404 ORTHO05D001765 1.5e-16 90.1 156 37.2
Sed0014728 Sechium edule HOM05D000404 ORTHO05D001765 1.5e-16 90.1 154 39.6
Sc19g0005720 Simmondsia chinensis HOM05D000404 ORTHO05D001765 2.6e-16 89.4 159 36.5
HPP92_025578 Vanilla planifolia HOM05D000404 ORTHO05D001765 2.6e-16 89.4 64 71.9
FAN17G0810 Fragaria x ananassa HOM05D000404 ORTHO05D001765 4.4e-16 88.6 156 37.8
Nitab4.5_0000451g0050 Nicotiana tabacum HOM05D000404 ORTHO05D001765 4.4e-16 88.6 156 37.8
TAR636G1252 Trochodendron aralioides HOM05D000404 ORTHO05D001765 4.4e-16 88.6 164 39.0
Atru.chr4.1867 Acer truncatum HOM05D000404 ORTHO05D001765 9.7e-16 87.4 166 39.2
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 9.7e-16 87.4 156 37.2
Lsat_1_v5_gn_6_67781 Lactuca sativa HOM05D000404 ORTHO05D001765 1.7e-15 86.7 159 39.0
FvH4_4g05230 Fragaria vesca HOM05D000404 ORTHO05D001765 2.2e-15 86.3 156 37.2
FAN12G4205 Fragaria x ananassa HOM05D000404 ORTHO05D001765 2.2e-15 86.3 156 37.2
THA.LOC104821625 Tarenaya hassleriana HOM05D000404 ORTHO05D001765 2.2e-15 86.3 164 37.2
RcHm_v2.0_Chr4g0396151 Rosa chinensis HOM05D000404 ORTHO05D001765 2.8e-15 85.9 157 38.2
Ciclev10004620m.g Citrus clementina HOM05D000404 ORTHO05D001765 3.7e-15 85.5 167 37.1
Prupe.1G053800 Prunus persica HOM05D000404 ORTHO05D001765 4.8e-15 85.1 153 38.6
MSTRG.4192 Avicennia marina HOM05D000404 ORTHO05D001765 1.1e-14 84.0 162 38.9
Cfa014834 Carpinus fangiana HOM05D000404 ORTHO05D001765 1.1e-14 84.0 156 38.5
Cc00_g17190 Coffea canephora HOM05D000404 ORTHO05D001765 1.1e-14 84.0 164 36.0
Haze_11518 Corylus avellana HOM05D000404 ORTHO05D001765 1.1e-14 84.0 156 38.5
MD13G1226400 Malus domestica HOM05D000404 ORTHO05D001765 1.1e-14 84.0 153 36.6
Sed0027694 Sechium edule HOM05D000404 ORTHO05D001765 1.1e-14 84.0 153 34.6
CiPaw.02G104300 Carya illinoinensis HOM05D000404 ORTHO05D001765 1.4e-14 83.6 159 37.7
TWI53G0819 Tripterygium wilfordii HOM05D000404 ORTHO05D001765 1.4e-14 83.6 163 38.0
AUR62000148 Chenopodium quinoa HOM05D000404 ORTHO05D001765 1.8e-14 83.2 158 35.4
PSO832G3287 Papaver somniferum HOM05D000404 ORTHO05D001765 2.4e-14 82.8 166 39.2
Haze_11512 Corylus avellana HOM05D000404 ORTHO05D001765 3.1e-14 82.4 155 36.1
PGR004G0832 Punica granatum HOM05D000404 ORTHO05D001765 3.1e-14 82.4 153 37.9
SGA_v2.0_scaffold86G26844 Striga asiatica HOM05D000404 ORTHO05D001765 3.1e-14 82.4 160 38.1
MD16G1231500 Malus domestica HOM05D000404 ORTHO05D001765 4.1e-14 82.0 153 38.6
Lj2g0005479 Lotus japonicus HOM05D000404 ORTHO05D001765 7.0e-14 81.3 155 37.4
TWI09G0036 Tripterygium wilfordii HOM05D000404 ORTHO05D001765 7.0e-14 81.3 161 35.4
Lalb_Chr22g0353731 Lupinus albus HOM05D000404 ORTHO05D001765 9.1e-14 80.9 156 35.3
GSVIVG01001863001 Vitis vinifera HOM05D000404 ORTHO05D001765 9.1e-14 80.9 157 35.0
arahy.Tifrunner.gnm1.ann1.4Y2508 Arachis hypogaea HOM05D000404 ORTHO05D001765 1.2e-13 80.5 162 32.1
CSS0003801 Camellia sinensis var. sinensis HOM05D000404 ORTHO05D001765 1.6e-13 80.1 159 36.5
Migut.G00594 Erythranthe guttata HOM05D000404 ORTHO05D001765 2.0e-13 79.7 159 39.0
Solyc09g091030.3 Solanum lycopersicum HOM05D000404 ORTHO05D001765 2.6e-13 79.3 137 39.4
CSS0027311 Camellia sinensis var. sinensis HOM05D000404 ORTHO05D001765 3.5e-13 79.0 157 37.6
Hma1.2p1_0144F.1_g065110 Hydrangea macrophylla HOM05D000404 ORTHO05D001765 3.5e-13 79.0 160 39.4
Oeu023149.1 Olea europaea HOM05D000404 ORTHO05D001765 3.5e-13 79.0 163 35.0
Potri.010G062900 Populus trichocarpa HOM05D000404 ORTHO05D001765 4.5e-13 78.6 168 35.1
Sopen09g034010 Solanum pennellii HOM05D000404 ORTHO05D001765 4.5e-13 78.6 137 39.4
Psat0s398g0040 Pisum sativum HOM05D000404 ORTHO05D001765 5.9e-13 78.2 157 35.7
arahy.Tifrunner.gnm1.ann1.TP5BL7 Arachis hypogaea HOM05D000404 ORTHO05D001765 1.0e-12 77.4 162 30.9
Dinv29782 Davidia involucrata HOM05D000404 ORTHO05D001765 1.0e-12 77.4 169 38.5
Nn1g03038 Nelumbo nucifera HOM05D000404 ORTHO05D001765 1.0e-12 77.4 171 36.3
CSS0047759 Camellia sinensis var. sinensis HOM05D000404 ORTHO05D001765 1.3e-12 77.0 157 36.9
Glyma.16G217900 Glycine max HOM05D000404 ORTHO05D001765 1.3e-12 77.0 158 32.9
Hma1.2p1_0112F.1_g055000 Hydrangea macrophylla HOM05D000404 ORTHO05D001765 1.3e-12 77.0 167 38.9
vmacro00529 Vaccinium macrocarpon HOM05D000404 ORTHO05D001765 1.3e-12 77.0 159 35.8
Ah.15g091290 Amaranthus hybridus HOM05D000404 ORTHO05D001765 2.9e-12 75.9 165 33.9
Cpa.g.sc59.40 Carica papaya HOM05D000404 ORTHO05D001765 2.9e-12 75.9 160 36.2
CAN.G812.36 Capsicum annuum HOM05D000404 ORTHO05D001765 3.8e-12 75.5 163 34.4
Rhsim09G0044200 Rhododendron simsii HOM05D000404 ORTHO05D001765 3.8e-12 75.5 158 36.1
SalBow2G1245 Salvia bowleyana HOM05D000404 ORTHO05D001765 3.8e-12 75.5 159 36.5
Manes.15G047700 Manihot esculenta HOM05D000404 ORTHO05D001765 5.0e-12 75.1 161 36.6
PGSC0003DMG400001549 Solanum tuberosum HOM05D000404 ORTHO05D001765 5.0e-12 75.1 163 35.6
Dinv27136 Davidia involucrata HOM05D000404 ORTHO05D001765 6.5e-12 74.7 162 36.4
Sabra10G0043800 Salix brachista HOM05D000404 ORTHO05D001765 8.5e-12 74.3 166 35.5
Potri.008G174100 Populus trichocarpa HOM05D000404 ORTHO05D001765 1.1e-11 73.9 166 36.7
QL06p022124 Quercus lobata HOM05D000404 ORTHO05D001765 1.1e-11 73.9 158 34.8
ATR0723G058 Amborella trichopoda HOM05D000404 ORTHO05D001765 1.5e-11 73.6 169 36.7
EL10Ac3g06727 Beta vulgaris HOM05D000404 ORTHO05D001765 1.9e-11 73.2 160 32.5
AUR62019329 Chenopodium quinoa HOM05D000404 ORTHO05D001765 1.9e-11 73.2 159 35.8
AUR62035895 Chenopodium quinoa HOM05D000404 ORTHO05D001765 1.9e-11 73.2 155 32.9
HanXRQChr02g0059361 Helianthus annuus HOM05D000404 ORTHO05D001765 2.5e-11 72.8 159 35.8
unitig_736.g22482 Utricularia gibba HOM05D000404 ORTHO05D009097 3.2e-11 72.4 161 34.2
Glyma.09G168300 Glycine max HOM05D000404 ORTHO05D001765 4.2e-11 72.0 157 31.2
Medtr6g477770 Medicago truncatula HOM05D000404 ORTHO05D001765 7.2e-11 71.2 159 34.6
Ah.08g211260 Amaranthus hybridus HOM05D000404 ORTHO05D001765 9.4e-11 70.9 127 36.2
Ca_23681_v3 Cicer arietinum L. HOM05D000404 ORTHO05D001765 9.4e-11 70.9 153 31.4
Ca_30826_v3 Cicer arietinum L. HOM05D000404 ORTHO05D001765 9.4e-11 70.9 153 31.4
Phvul.004G143600 Phaseolus vulgaris HOM05D000404 ORTHO05D001765 9.4e-11 70.9 153 30.7
unitig_899.g14856 Utricularia gibba HOM05D000404 ORTHO05D001765 9.4e-11 70.9 163 33.1
Aqoxy5G00092 Aquilegia oxysepala HOM05D000404 ORTHO05D001765 1.2e-10 70.5 174 32.2
Thecc.04G269700 Theobroma cacao HOM05D000404 ORTHO05D001765 2.1e-10 69.7 172 33.1
Sabra08G0132800 Salix brachista HOM05D000404 ORTHO05D001765 3.6e-10 68.9 163 34.4
Lj6A639T43 Lonicera japonica HOM05D000404 ORTHO05D001765 1.0e-09 67.4 154 33.1
DCAR_024303 Daucus carota HOM05D000404 ORTHO05D001765 1.4e-09 67.0 157 36.3
Manes.03G155800 Manihot esculenta HOM05D000404 ORTHO05D001765 4.0e-09 65.5 164 34.1
BcaB06g26607 Brassica carinata HOM05D000404 ORTHO05D001765 5.2e-09 65.1 154 33.8
BcaC06g35671 Brassica carinata HOM05D000404 ORTHO05D001765 8.8e-09 64.3 153 33.3
C07p12240 Brassica napus HOM05D000404 ORTHO05D001765 8.8e-09 64.3 153 33.3
Nitab4.5_0000745g0030 Nicotiana tabacum HOM05D000404 ORTHO05D001765 8.8e-09 64.3 158 35.4
Actinidia25096 Actinidia chinensis HOM05D000404 ORTHO05D001765 1.2e-08 63.9 156 35.3
Hund24862 Selenicereus undatus HOM05D000404 ORTHO05D001765 1.2e-08 63.9 156 32.1
BolC7t41691H Brassica oleracea HOM05D000404 ORTHO05D001765 1.5e-08 63.5 154 33.1
A07p08090 Brassica napus HOM05D000404 ORTHO05D001765 2.0e-08 63.2 154 33.1
Carub.0003s2460 Capsella rubella HOM05D000404 ORTHO05D001765 2.0e-08 63.2 157 32.5
AT3G23920 Arabidopsis thaliana HOM05D000404 ORTHO05D001765 2.6e-08 62.8 158 31.0
BraA07t28594Z Brassica rapa HOM05D000404 ORTHO05D001765 2.6e-08 62.8 154 33.1
Gohir.D10G161101 Gossypium hirsutum HOM05D000404 ORTHO05D001765 3.3e-08 62.4 171 32.2
Gohir.D10G161200 Gossypium hirsutum HOM05D000404 ORTHO05D001765 3.3e-08 62.4 171 32.2
Thhalv10002460m.g Eutrema salsugineum HOM05D000404 ORTHO05D001765 7.5e-08 61.2 163 32.5
Nn3g19833 Nelumbo nucifera HOM05D000404 ORTHO05D001765 7.5e-08 61.2 165 33.9
Rhsim02G0049200 Rhododendron simsii HOM05D000404 ORTHO05D001765 7.5e-08 61.2 163 35.0
AL3G39630 Arabidopsis lyrata HOM05D000404 ORTHO05D001765 9.7e-08 60.8 156 31.4
Gorai.006G073600 Gossypium raimondii HOM05D000404 ORTHO05D001765 9.7e-08 60.8 173 32.4
Gorai.011G181000 Gossypium raimondii HOM05D000404 ORTHO05D001765 9.7e-08 60.8 171 31.6
Duzib212G0590 Durio zibethinus HOM05D000404 ORTHO05D001765 1.7e-07 60.1 168 33.9
Lj3C636T2 Lonicera japonica HOM05D000404 ORTHO05D001765 1.7e-07 60.1 157 29.9
Gohir.D10G161266 Gossypium hirsutum HOM05D000404 ORTHO05D001765 2.2e-07 59.7 166 31.9
Gohir.D10G161401 Gossypium hirsutum HOM05D000404 ORTHO05D001765 2.2e-07 59.7 166 31.9
Gohir.D10G161700 Gossypium hirsutum HOM05D000404 ORTHO05D001765 2.2e-07 59.7 166 31.9
CARHR100350 Cardamine hirsuta HOM05D000404 ORTHO05D001765 2.8e-07 59.3 155 34.2
CSS0043627 Camellia sinensis var. sinensis HOM05D000404 ORTHO05D001765 3.7e-07 58.9 156 31.4
Gohir.D09G059200 Gossypium hirsutum HOM05D000404 ORTHO05D001765 3.7e-07 58.9 173 31.8
vmacro15493 Vaccinium macrocarpon HOM05D000404 ORTHO05D001765 3.7e-07 58.9 163 34.4
Gohir.D10G161766 Gossypium hirsutum HOM05D000404 ORTHO05D001765 4.8e-07 58.5 161 32.3
Nitab4.5_0001769g0150 Nicotiana tabacum HOM05D000404 ORTHO05D001765 4.8e-07 58.5 157 32.5
CANSAT78G2044 Cannabis sativa HOM05D000404 ORTHO05D001765 8.2e-07 57.8 180 28.9
VMungo0464G1150 Vigna mungo HOM05D000404 ORTHO05D001765 1.4e-06 57.0 156 30.8
Gohir.A09G060000 Gossypium hirsutum HOM05D000404 ORTHO05D001765 1.8e-06 56.6 173 31.2
Gohir.D10G161300 Gossypium hirsutum HOM05D000404 ORTHO05D001765 1.8e-06 56.6 161 32.3
Gohir.D10G161601 Gossypium hirsutum HOM05D000404 ORTHO05D001765 1.8e-06 56.6 161 32.3
CDE02G1349 Ceratophyllum demersum HOM05D000404 ORTHO05D001765 3.1e-06 55.8 183 32.2
Duzib151G0851 Durio zibethinus HOM05D000404 ORTHO05D001765 3.1e-06 55.8 171 30.4
Gorai.011G180900 Gossypium raimondii HOM05D000404 ORTHO05D001765 3.1e-06 55.8 166 31.3
BraA03t13491Z Brassica rapa HOM05D000404 ORTHO05D001765 5.3e-06 55.1 154 29.9


User provided reference genes

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