Gene: Sopen09g034010

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g034010
  • Transcript Identifier Sopen09g034010.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 82001214-82003759 : positive

Gene Family Information

  • ID HOM05D000404
  • #Genes/#Species 1248/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g034010.1

Descriptions

  • Description Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3. | beta-amylase 1 (BAM1) | FUNCTIONS IN: beta-amylase activity | INVOLVED IN: response to water deprivation, starch catabolic process | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site , Glycoside hydrolase, family 14 , Glycoside hydrolase, catalytic core , Glycoside hydrolase, family 14B, plant , Glycoside hydrolase, subgroup, catalytic core | BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000272
IEA
InterPropolysaccharide catabolic process
GO:0005983
ISO
PLAZA Integrative Orthologystarch catabolic process Solyc09g091030.3
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc09g091030.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016161
IEA
InterProbeta-amylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G23920
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G23920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017853 Glycoside hydrolase superfamily
IPR001371 Glycoside hydrolase, family 14B, plant
IPR001554 Glycoside hydrolase, family 14
Mapman id Description
3.2.3.3.1.2 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase