Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 2.0e-185 652.5 383 100.0
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 1.4e-135 486.9 362 69.1
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 3.2e-135 485.7 362 68.5
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 2.7e-134 482.6 349 71.3
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 3.9e-133 478.8 353 69.1
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 3.9e-133 478.8 353 69.1
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 5.7e-132 474.9 361 67.6
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 2.2e-131 473.0 352 68.8
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 2.2e-131 473.0 353 68.6
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 8.2e-131 471.1 351 70.7
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 8.2e-131 471.1 351 70.7
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 1.8e-130 469.9 352 68.2
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 3.1e-130 469.2 364 68.1
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 3.1e-130 469.2 377 65.3
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 4.1e-130 468.8 351 68.9
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 9.1e-130 467.6 364 67.3
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 2.0e-129 466.5 362 67.7
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 2.0e-129 466.5 352 67.9
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 2.6e-129 466.1 362 66.6
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 3.4e-129 465.7 362 67.4
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 4.5e-129 465.3 351 68.1
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 4.5e-129 465.3 351 69.8
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 5.9e-129 464.9 352 67.0
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 1.0e-128 464.2 351 68.1
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 1.0e-128 464.2 361 65.9
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 1.7e-128 463.4 349 68.2
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 2.2e-128 463.0 352 67.6
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 2.9e-128 462.6 351 67.8
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 2.9e-128 462.6 349 67.9
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 3.8e-128 462.2 354 67.2
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 5.0e-128 461.8 364 65.9
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 8.5e-128 461.1 351 66.7
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 1.1e-127 460.7 351 66.1
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 1.9e-127 459.9 350 67.1
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 5.5e-127 458.4 359 67.4
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 5.5e-127 458.4 359 65.5
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 7.2e-127 458.0 359 65.7
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 9.4e-127 457.6 351 66.1
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 9.4e-127 457.6 362 66.0
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 9.4e-127 457.6 359 66.9
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 1.2e-126 457.2 351 66.1
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 1.6e-126 456.8 351 66.1
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 1.6e-126 456.8 349 67.0
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 1.6e-126 456.8 359 67.7
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 2.7e-126 456.1 351 67.0
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 4.7e-126 455.3 351 65.8
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 4.7e-126 455.3 351 65.8
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 6.1e-126 454.9 352 67.9
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.8e-125 453.4 372 64.8
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 1.8e-125 453.4 351 66.1
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 2.3e-125 453.0 352 65.9
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 8.8e-125 451.1 352 65.9
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 1.1e-124 450.7 352 65.6
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 1.5e-124 450.3 364 63.7
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 1.5e-124 450.3 351 65.2
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 2.0e-124 449.9 374 62.8
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 2.0e-124 449.9 359 66.0
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 2.6e-124 449.5 349 65.3
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 7.4e-124 448.0 354 64.7
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 1.3e-123 447.2 345 67.0
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 1.3e-123 447.2 360 65.0
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 1.7e-123 446.8 351 65.2
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 1.7e-123 446.8 285 82.5
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 2.2e-123 446.4 354 66.1
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 6.3e-123 444.9 383 63.7
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 8.2e-123 444.5 350 65.7
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 1.4e-122 443.7 351 65.0
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 3.1e-122 442.6 354 64.7
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.6e-118 430.3 359 63.0
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 2.6e-116 422.9 370 61.6
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 7.5e-116 421.4 357 64.1
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 3.7e-115 419.1 352 63.1
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 4.8e-115 418.7 352 62.8
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 8.2e-115 417.9 371 60.9
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 5.3e-114 415.2 348 62.4
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 1.0e-112 411.0 369 61.0
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 3.8e-112 409.1 351 62.4
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 1.9e-111 406.8 349 62.2
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 9.4e-111 404.4 384 58.1
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 8.0e-110 401.4 302 68.5
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 3.0e-109 399.4 357 60.2
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 6.8e-109 398.3 310 67.1
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 6.8e-109 398.3 351 59.3
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 2.0e-108 396.7 418 53.3
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 3.1e-106 389.4 360 59.4
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 3.1e-106 389.4 349 58.5
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 9.1e-106 387.9 350 57.4
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 2.7e-105 386.3 539 44.9
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 4.5e-105 385.6 352 61.1
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 2.2e-104 383.3 364 57.4
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 5.5e-103 378.6 336 60.4
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 7.5e-100 368.2 347 57.1
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 5.4e-98 362.1 315 61.3
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 5.4e-98 362.1 316 62.3
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 5.4e-98 362.1 293 63.5
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 1.6e-97 360.5 281 66.2
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 5.6e-95 352.1 339 53.7
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 1.2e-94 350.9 286 65.4
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 3.6e-94 349.4 351 55.6
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 4.4e-92 342.4 296 59.8
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 5.7e-92 342.0 303 58.1
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 3.0e-88 329.7 341 54.5
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 3.3e-87 326.2 285 61.4
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 7.0e-82 308.5 357 50.1
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 5.0e-80 302.4 260 60.8
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 5.0e-80 302.4 269 58.7
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 1.2e-78 297.7 346 48.8
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 6.8e-77 292.0 351 49.0
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 2.7e-65 253.4 345 44.3
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 7.3e-63 245.4 174 69.0
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 3.1e-61 240.0 225 57.3
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 1.7e-59 234.2 206 62.1
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 9.3e-58 228.4 157 72.6
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 2.7e-57 226.9 218 55.0
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 7.3e-55 218.8 123 84.6
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.0e-52 210.7 488 32.4
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 7.6e-52 208.8 199 55.8
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.3e-51 208.0 119 83.2
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 9.3e-42 175.3 182 53.3
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 1.3e-40 171.4 110 75.5
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 3.9e-40 169.9 225 45.8
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.2e-36 158.3 313 31.9
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 4.5e-36 156.4 97 77.3
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 3.1e-29 133.7 66 92.4
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 6.1e-25 119.4 319 27.0
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.5e-23 114.0 61 90.2
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 5.7e-23 112.8 59 91.5
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 6.3e-22 109.4 60 86.7
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 1.1e-21 108.6 63 81.0
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 3.4e-20 103.6 70 68.6
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.2e-19 100.9 56 85.7
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 7.2e-18 95.9 106 43.4
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 1.8e-16 91.3 60 76.7
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 5.3e-13 79.7 65 61.5
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 9.4e-10 68.9 43 79.1
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 9.4e-10 68.9 32 93.8
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 3.3e-07 60.5 55 56.4


User provided reference genes

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