Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_023801 Vanilla planifolia HOM05D002026 ORTHO05D013449 2.4e-41 171.8 90 100.0
Cfa002264 Carpinus fangiana HOM05D002026 ORTHO05D002291 5.4e-17 90.9 112 55.4
vmacro06117 Vaccinium macrocarpon HOM05D002026 ORTHO05D002291 7.8e-16 87.0 70 67.1
PGSC0003DMG400030687 Solanum tuberosum HOM05D002026 ORTHO05D002291 5.1e-15 84.3 70 67.1
Peaxi162Scf00088g00616 Petunia axillaris HOM05D002026 ORTHO05D002291 6.6e-15 84.0 70 65.7
Migut.J01243 Erythranthe guttata HOM05D002026 ORTHO05D002291 1.1e-14 83.2 71 63.4
Solyc07g007430.3 Solanum lycopersicum HOM05D002026 ORTHO05D002291 1.1e-14 83.2 70 65.7
Sopen07g003480 Solanum pennellii HOM05D002026 ORTHO05D002291 1.1e-14 83.2 70 65.7
MELO3C004483.2 Cucumis melo HOM05D002026 ORTHO05D002291 1.9e-14 82.4 70 68.6
CsaV3_2G003370 Cucumis sativus L. HOM05D002026 ORTHO05D002291 1.9e-14 82.4 70 68.6
SalBow1G0631 Salvia bowleyana HOM05D002026 ORTHO05D002291 1.9e-14 82.4 69 68.1
Actinidia38707 Actinidia chinensis HOM05D002026 ORTHO05D002291 2.5e-14 82.0 70 61.4
Lalb_Chr07g0179371 Lupinus albus HOM05D002026 ORTHO05D002291 4.3e-14 81.3 70 67.1
TAR383G0696 Trochodendron aralioides HOM05D002026 ORTHO05D002291 4.3e-14 81.3 70 61.4
HPP92_003861 Vanilla planifolia HOM05D002026 ORTHO05D002291 4.3e-14 81.3 102 52.0
ClCG11G003500 Citrullus lanatus HOM05D002026 ORTHO05D002291 7.3e-14 80.5 70 65.7
Dinv36450 Davidia involucrata HOM05D002026 ORTHO05D002291 9.6e-14 80.1 77 59.7
Rhsim03G0253100 Rhododendron simsii HOM05D002026 ORTHO05D002291 9.6e-14 80.1 71 64.8
Manes.06G044200 Manihot esculenta HOM05D002026 ORTHO05D002291 1.2e-13 79.7 69 60.9
Sed0015884 Sechium edule HOM05D002026 ORTHO05D002291 1.2e-13 79.7 70 67.1
Lalb_Chr12g0198391 Lupinus albus HOM05D002026 ORTHO05D002291 1.6e-13 79.3 70 64.3
Sed0011227 Sechium edule HOM05D002026 ORTHO05D002291 1.6e-13 79.3 70 65.7
VMungo1215G1266 Vigna mungo HOM05D002026 ORTHO05D002291 1.6e-13 79.3 70 67.1
Ca_21638_v3 Cicer arietinum L. HOM05D002026 ORTHO05D002291 2.8e-13 78.6 70 68.6
Phvul.003G172300 Phaseolus vulgaris HOM05D002026 ORTHO05D002291 2.8e-13 78.6 70 68.6
DCAR_014917 Daucus carota HOM05D002026 ORTHO05D002291 3.6e-13 78.2 70 57.1
GSVIVG01012856001 Vitis vinifera HOM05D002026 ORTHO05D002291 3.6e-13 78.2 74 60.8
Cc06_g07670 Coffea canephora HOM05D002026 ORTHO05D002291 4.7e-13 77.8 73 61.6
Manes.14G119200 Manihot esculenta HOM05D002026 ORTHO05D002291 4.7e-13 77.8 69 60.9
BcaB05g22851 Brassica carinata HOM05D002026 ORTHO05D002291 6.2e-13 77.4 70 62.9
BcaC03g13757 Brassica carinata HOM05D002026 ORTHO05D002291 6.2e-13 77.4 70 61.4
BolC2t07037H Brassica oleracea HOM05D002026 ORTHO05D002291 6.2e-13 77.4 88 54.5
Ciclev10007734m.g Citrus clementina HOM05D002026 ORTHO05D002291 6.2e-13 77.4 70 64.3
FAN19G1251 Fragaria x ananassa HOM05D002026 ORTHO05D002291 6.2e-13 77.4 72 65.3
Glyma.13G163400 Glycine max HOM05D002026 ORTHO05D002291 6.2e-13 77.4 70 65.7
Nitab4.5_0002286g0080 Nicotiana tabacum HOM05D002026 ORTHO05D002291 1.1e-12 76.6 70 61.4
Nitab4.5_0009284g0010 Nicotiana tabacum HOM05D002026 ORTHO05D002291 1.1e-12 76.6 70 61.4
Psat0s571g0040 Pisum sativum HOM05D002026 ORTHO05D002291 1.1e-12 76.6 104 51.0
unitig_27.g25106 Utricularia gibba HOM05D004469 ORTHO05D005429 1.1e-12 76.6 69 60.9
BcaB01g04791 Brassica carinata HOM05D002026 ORTHO05D002291 1.4e-12 76.3 88 53.4
Oeu028019.1 Olea europaea HOM05D002026 ORTHO05D002291 1.4e-12 76.3 69 65.2
FvH4_1g02030 Fragaria vesca HOM05D002026 ORTHO05D002291 1.8e-12 75.9 72 63.9
Lj9A704T70 Lonicera japonica HOM05D002026 ORTHO05D002291 1.8e-12 75.9 72 61.1
THA.LOC104811016 Tarenaya hassleriana HOM05D002026 ORTHO05D002291 1.8e-12 75.9 70 62.9
Zm00001eb275220 Zea mays HOM05D002026 ORTHO05D002291 1.8e-12 75.9 76 59.2
arahy.Tifrunner.gnm1.ann1.FNDT39 Arachis hypogaea HOM05D002026 ORTHO05D002291 2.4e-12 75.5 70 64.3
MSTRG.6075 Avicennia marina HOM05D002026 ORTHO05D002291 2.4e-12 75.5 69 60.9
Cpa.g.sc46.65 Carica papaya HOM05D002026 ORTHO05D002291 2.4e-12 75.5 70 64.3
Nn2g12187 Nelumbo nucifera HOM05D002026 ORTHO05D002291 2.4e-12 75.5 70 60.0
Dinv41446 Davidia involucrata HOM05D002026 ORTHO05D002291 3.1e-12 75.1 75 58.7
Prupe.7G252300 Prunus persica HOM05D002026 ORTHO05D002291 3.1e-12 75.1 73 64.4
arahy.Tifrunner.gnm1.ann1.P4FGTG Arachis hypogaea HOM05D002026 ORTHO05D002291 4.0e-12 74.7 70 64.3
A02p06200 Brassica napus HOM05D002026 ORTHO05D002291 4.0e-12 74.7 88 52.3
BNapus_Darmor_BZH_scaffold_38p01640 Brassica napus HOM05D002026 ORTHO05D002291 4.0e-12 74.7 88 52.3
BraA02t05569Z Brassica rapa HOM05D002026 ORTHO05D002291 4.0e-12 74.7 88 52.3
QL02p090736 Quercus lobata HOM05D002026 ORTHO05D002291 4.0e-12 74.7 75 60.0
MSTRG.26328 Avicennia marina HOM05D002026 ORTHO05D002291 5.3e-12 74.3 69 60.9
A10p19600 Brassica napus HOM05D002026 ORTHO05D002291 5.3e-12 74.3 88 53.4
AUR62020007 Chenopodium quinoa HOM05D002026 ORTHO05D002291 5.3e-12 74.3 71 60.6
Haze_25446 Corylus avellana HOM05D002026 ORTHO05D002291 5.3e-12 74.3 70 61.4
Lalb_Chr13g0301341 Lupinus albus HOM05D002026 ORTHO05D002291 5.3e-12 74.3 70 58.6
MBI14_g24980_MAGBIO Magnolia biondii HOM05D002026 ORTHO05D002291 5.3e-12 74.3 104 49.0
MBI15_g22778_MAGBIO Magnolia biondii HOM05D002026 ORTHO05D002291 5.3e-12 74.3 69 60.9
A03p10020 Brassica napus HOM05D002026 ORTHO05D002291 6.9e-12 73.9 88 52.3
C03p11570 Brassica napus HOM05D002026 ORTHO05D002291 6.9e-12 73.9 88 52.3
BolC3t13629H Brassica oleracea HOM05D002026 ORTHO05D002291 6.9e-12 73.9 88 52.3
BraA03t10312Z Brassica rapa HOM05D002026 ORTHO05D002291 6.9e-12 73.9 88 52.3
FAN23G0648 Fragaria x ananassa HOM05D002026 ORTHO05D002291 6.9e-12 73.9 71 62.0
FAN26G0516 Fragaria x ananassa HOM05D002026 ORTHO05D002291 6.9e-12 73.9 71 62.0
SGA_v2.0_scaffold132G34499 Striga asiatica HOM05D002026 ORTHO05D002291 6.9e-12 73.9 70 62.9
THA.LOC104799627 Tarenaya hassleriana HOM05D002026 ORTHO05D002291 6.9e-12 73.9 70 62.9
TPR.G7984 Trifolium pratense HOM05D002026 ORTHO05D002291 6.9e-12 73.9 70 64.3
Zm00001eb386990 Zea mays HOM05D002026 ORTHO05D002291 6.9e-12 73.9 76 57.9
BcaB08g36495 Brassica carinata HOM05D002026 ORTHO05D002291 9.0e-12 73.6 70 61.4
Carub.0006s1874 Capsella rubella HOM05D002026 ORTHO05D002291 9.0e-12 73.6 70 60.0
TAR170G0002 Trochodendron aralioides HOM05D002026 ORTHO05D002291 9.0e-12 73.6 72 56.9
TAR625G0169 Trochodendron aralioides HOM05D002026 ORTHO05D002291 9.0e-12 73.6 72 59.7
BcaC04g19427 Brassica carinata HOM05D002026 ORTHO05D002291 1.2e-11 73.2 88 52.3
C09p55820 Brassica napus HOM05D002026 ORTHO05D002291 1.2e-11 73.2 88 52.3
BolC9t58450H Brassica oleracea HOM05D002026 ORTHO05D002291 1.2e-11 73.2 88 52.3
Sp6g24080 Schrenkiella parvula HOM05D002026 ORTHO05D002291 1.2e-11 73.2 70 60.0
TAR677G0001 Trochodendron aralioides HOM05D002026 ORTHO05D002291 1.2e-11 73.2 72 58.3
CANSAT11G1418 Cannabis sativa HOM05D002026 ORTHO05D002291 1.5e-11 72.8 76 57.9
Thhalv10012979m.g Eutrema salsugineum HOM05D002026 ORTHO05D002291 1.5e-11 72.8 70 60.0
CSS0041508 Camellia sinensis var. sinensis HOM05D002026 ORTHO05D002291 2.0e-11 72.4 76 56.6
Glyma.17G107500 Glycine max HOM05D002026 ORTHO05D002291 2.0e-11 72.4 70 60.0
Ah.09g224090 Amaranthus hybridus HOM05D002026 ORTHO05D002291 2.6e-11 72.0 116 43.1
Oeu058581.1 Olea europaea HOM05D002026 ORTHO05D013449 2.6e-11 72.0 69 63.8
TWI34G1350 Tripterygium wilfordii HOM05D002026 ORTHO05D002291 2.6e-11 72.0 70 61.4
vmacro06119 Vaccinium macrocarpon HOM05D002026 ORTHO05D002291 3.4e-11 71.6 110 44.5
BraA10t44035Z Brassica rapa HOM05D002026 ORTHO05D002291 4.4e-11 71.2 88 51.1
AUR62011227 Chenopodium quinoa HOM05D002026 ORTHO05D002291 4.4e-11 71.2 71 59.2
Lsat_1_v5_gn_8_62900 Lactuca sativa HOM05D002026 ORTHO05D002291 4.4e-11 71.2 69 56.5
MD15G1162500 Malus domestica HOM05D002026 ORTHO05D002291 4.4e-11 71.2 71 62.0
Nn8g39645 Nelumbo nucifera HOM05D002026 ORTHO05D002291 4.4e-11 71.2 70 55.7
CSS0033823 Camellia sinensis var. sinensis HOM05D002026 ORTHO05D002291 5.8e-11 70.9 80 53.8
Aa31LG4G13330 Aethionema arabicum HOM05D002026 ORTHO05D002291 7.6e-11 70.5 70 57.1
CARHR192490 Cardamine hirsuta HOM05D002026 ORTHO05D002291 7.6e-11 70.5 70 55.7
DCAR_009343 Daucus carota HOM05D002026 ORTHO05D002291 7.6e-11 70.5 69 56.5
Potri.006G061800 Populus trichocarpa HOM05D002026 ORTHO05D002291 7.6e-11 70.5 75 58.7
Potri.018G121200 Populus trichocarpa HOM05D002026 ORTHO05D002291 7.6e-11 70.5 72 56.9
Sabra18G0099900 Salix brachista HOM05D002026 ORTHO05D002291 7.6e-11 70.5 72 56.9
Aqoxy120s003 Aquilegia oxysepala HOM05D002026 ORTHO05D013449 9.9e-11 70.1 39 84.6
Aqoxy7G02451 Aquilegia oxysepala HOM05D002026 ORTHO05D002291 9.9e-11 70.1 39 84.6
Lsat_1_v5_gn_7_45841 Lactuca sativa HOM05D002026 ORTHO05D002291 9.9e-11 70.1 74 55.4
BcaB01g01298 Brassica carinata HOM05D002026 ORTHO05D013449 1.3e-10 69.7 90 48.9
Eucgr.C04398 Eucalyptus grandis HOM05D002026 ORTHO05D002291 1.3e-10 69.7 73 56.2
MD02G1018500 Malus domestica HOM05D002026 ORTHO05D002291 1.3e-10 69.7 73 60.3
RcHm_v2.0_Chr2g0087091 Rosa chinensis HOM05D002026 ORTHO05D002291 1.3e-10 69.7 81 58.0
AL6G31910 Arabidopsis lyrata HOM05D002026 ORTHO05D002291 1.7e-10 69.3 70 58.6
Gohir.D06G050900 Gossypium hirsutum HOM05D002026 ORTHO05D002291 1.7e-10 69.3 76 53.9
Gorai.010G059000 Gossypium raimondii HOM05D002026 ORTHO05D002291 1.7e-10 69.3 76 53.9
Medtr1g112830 Medicago truncatula HOM05D002026 ORTHO05D002291 1.7e-10 69.3 70 60.0
PSO017G2992 Papaver somniferum HOM05D002026 ORTHO05D002291 1.7e-10 69.3 36 86.1
PSO170G2750 Papaver somniferum HOM05D002026 ORTHO05D002291 1.7e-10 69.3 36 86.1
Duzib187G1734 Durio zibethinus HOM05D002026 ORTHO05D002291 2.2e-10 68.9 77 54.5
Mapoly0011s0006 Marchantia polymorpha HOM05D002026 ORTHO05D002291 2.2e-10 68.9 73 54.8
Sabra18G0101700 Salix brachista HOM05D002026 ORTHO05D002291 2.2e-10 68.9 72 55.6
Thecc.09G137300 Theobroma cacao HOM05D002026 ORTHO05D002291 2.2e-10 68.9 75 53.3
Gohir.A06G052000 Gossypium hirsutum HOM05D002026 ORTHO05D002291 2.9e-10 68.6 78 55.1
ATR0767G066 Amborella trichopoda HOM05D002026 ORTHO05D002291 4.9e-10 67.8 69 59.4
AT5G20350 Arabidopsis thaliana HOM05D002026 ORTHO05D002291 6.4e-10 67.4 69 58.0
PGR102G0275 Punica granatum HOM05D002026 ORTHO05D002291 6.4e-10 67.4 70 54.3
HanXRQChr05g0143461 Helianthus annuus HOM05D002026 ORTHO05D002291 1.1e-09 66.6 69 59.4
CiPaw.03G252400 Carya illinoinensis HOM05D002026 ORTHO05D002291 1.9e-09 65.9 33 90.9
CDE05G1547 Ceratophyllum demersum HOM05D002026 ORTHO05D002291 1.9e-09 65.9 70 55.7
ECA240G2533 Erigeron canadensis HOM05D002026 ORTHO05D002291 1.9e-09 65.9 74 51.4
Os06g0644500 Oryza sativa ssp. japonica HOM05D002026 ORTHO05D002291 1.9e-09 65.9 39 82.1
Sabra06G0044500 Salix brachista HOM05D002026 ORTHO05D002291 1.9e-09 65.9 152 36.2
Lj4g0021525 Lotus japonicus HOM05D002026 ORTHO05D002291 2.4e-09 65.5 71 60.6
Medtr4g116160 Medicago truncatula HOM05D002026 ORTHO05D002291 2.4e-09 65.5 70 58.6
Hund09310 Selenicereus undatus HOM05D002026 ORTHO05D002291 2.4e-09 65.5 70 55.7
Gohir.D05G014100 Gossypium hirsutum HOM05D002026 ORTHO05D002291 3.2e-09 65.1 74 54.1
Gorai.009G014100 Gossypium raimondii HOM05D002026 ORTHO05D002291 3.2e-09 65.1 74 54.1
HanXRQChr09g0241841 Helianthus annuus HOM05D002026 ORTHO05D002291 3.2e-09 65.1 74 52.7
Lj7C438G9 Lonicera japonica HOM05D002026 ORTHO05D002291 3.2e-09 65.1 70 60.0
Gohir.A05G013000 Gossypium hirsutum HOM05D002026 ORTHO05D002291 5.4e-09 64.3 74 52.7
ECA236G2038 Erigeron canadensis HOM05D002026 ORTHO05D002291 9.3e-09 63.5 69 53.6
Duzib150G0754 Durio zibethinus HOM05D002026 ORTHO05D002291 1.6e-08 62.8 76 52.6
SHI03254 Sapria himalayana HOM05D002026 ORTHO05D013449 1.6e-08 62.8 108 41.7
SEGI_14223 Sequoiadendron giganteum HOM05D002026 ORTHO05D002291 1.6e-08 62.8 73 50.7
COL.COLO4_03740 Corchorus olitorius HOM05D002026 ORTHO05D013449 2.1e-08 62.4 99 42.4
Gohir.D08G101200 Gossypium hirsutum HOM05D002026 ORTHO05D002291 2.1e-08 62.4 77 50.6
Os02g0184000 Oryza sativa ssp. japonica HOM05D002026 ORTHO05D002291 2.1e-08 62.4 76 52.6
Pp3c12_14430 Physcomitrium patens HOM05D002026 ORTHO05D002291 2.1e-08 62.4 73 49.3
Eucgr.C00485 Eucalyptus grandis HOM05D002026 ORTHO05D002291 2.7e-08 62.0 70 54.3
Gohir.A08G090200 Gossypium hirsutum HOM05D002026 ORTHO05D002291 4.6e-08 61.2 77 50.6
Gorai.004G109200 Gossypium raimondii HOM05D002026 ORTHO05D002291 6.0e-08 60.8 77 49.4
EL10Ac8g18787 Beta vulgaris HOM05D002026 ORTHO05D002291 1.3e-07 59.7 35 74.3
Medtr1g112820 Medicago truncatula HOM05D005442 ORTHO05D002291 1.7e-07 59.3 69 53.6
vmacro22982 Vaccinium macrocarpon HOM05D002026 ORTHO05D002291 3.9e-07 58.2 70 52.9
Zm00001eb234320 Zea mays HOM05D002026 ORTHO05D002291 5.1e-07 57.8 68 58.8
Pp3c4_7570 Physcomitrium patens HOM05D002026 ORTHO05D002291 1.1e-06 56.6 73 49.3
Hund21596 Selenicereus undatus HOM05D002026 ORTHO05D002291 1.1e-06 56.6 35 74.3
Sabra16G0306200 Salix brachista HOM05D002026 ORTHO05D013449 4.3e-06 54.7 72 47.2
SEGI_22278 Sequoiadendron giganteum HOM05D002026 ORTHO05D002291 9.6e-06 53.5 55 47.3


User provided reference genes

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