Gene: AT5G20350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G20350
  • Transcript Identifier AT5G20350.1
  • Gene Type Coding gene
  • Location Chr5 : 6876772-6881102 : positive

Gene Family Information

  • ID HOM05D002026
  • #Genes/#Species 327/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G20350.1
  • symbol TIP1
  • full_name TIP GROWTH DEFECTIVE 1
  • uniprot Q52T38

Descriptions

  • Description Ankyrin repeat family protein with DHHC zinc finger domain-containing protein
  • Computational description TIP GROWTH DEFECTIVE 1 (TIP1); FUNCTIONS IN: acyl binding, S-acyltransferase activity; INVOLVED IN: response to salt stress, cell tip growth; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 74376 Blast hits to 32836 proteins in 1312 species: Archae - 100; Bacteria - 6632; Metazoa - 35576; Fungi - 7192; Plants - 4422; Viruses - 788; Other Eukaryotes - 19666 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0018345
IBA
Gene Ontologyprotein palmitoylation1
GO:0009932
IMP
Gene Ontologycell tip growth2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016409
IEA
GOA Databasepalmitoyltransferase activity
GO:0016409
IBA
Gene Ontologypalmitoyltransferase activity1
GO:0016409
IEA
InterPropalmitoyltransferase activity
GO:0005515
IEA
InterProprotein binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016746
IEA
GOA Databaseacyltransferase activity
GO:0019706
IEA
Gene Ontologyprotein-cysteine S-palmitoyltransferase activity
GO:0016417
IGI
Gene OntologyS-acyltransferase activity3
GO:0000035
IDA
Gene Ontologyacyl binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0000139
IBA
Gene OntologyGolgi membrane1
GO:0016020
IEA
GOA Databasemembrane
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IDA, HDA
Gene OntologyGolgi apparatus4
GO:0005802
IDA
GOA Databasetrans-Golgi network
GO:0005802
HDA
Gene Ontologytrans-Golgi network5
GO:0005768
IDA
GOA Databaseendosome
GO:0005768
HDA
Gene Ontologyendosome5
GO:0030659
IEA
GOA Databasecytoplasmic vesicle membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020683 Ankyrin repeat-containing domain
IPR036770 Ankyrin repeat-containing domain superfamily
IPR002110 Ankyrin repeat
IPR001594 Palmitoyltransferase, DHHC domain
Mapman id Description
18.3.3.1 Protein modification.lipidation.Cys-linked S-acylation.protein S-acyltransferase