Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_023044 Vanilla planifolia HOM05D043096 ORTHO05D011171 4.7e-86 321.2 173 100.0
HPP92_023095 Vanilla planifolia HOM05D043096 ORTHO05D011171 1.1e-42 177.2 105 93.3
TAR374G1519 Trochodendron aralioides HOM05D009820 ORTHO05D011171 4.5e-28 128.6 204 41.2
Sabra01G0049200 Salix brachista HOM05D009820 ORTHO05D011171 4.7e-25 118.6 201 41.3
Atru.chr12.1461 Acer truncatum HOM05D009820 ORTHO05D011171 1.1e-23 114.0 207 40.1
Atru.chr12.1466 Acer truncatum HOM05D009820 ORTHO05D011171 2.0e-23 113.2 207 39.6
Potri.001G070200 Populus trichocarpa HOM05D009820 ORTHO05D011171 4.4e-23 112.1 190 40.0
Aqoxy5G02999 Aquilegia oxysepala HOM05D000742 ORTHO05D011171 1.3e-22 110.5 209 38.8
Nn3g16210 Nelumbo nucifera HOM05D000742 ORTHO05D011171 6.3e-22 108.2 204 38.2
Dinv14392 Davidia involucrata HOM05D009820 ORTHO05D011171 2.4e-21 106.3 205 37.1
Manes.08G099600 Manihot esculenta HOM05D009820 ORTHO05D011171 7.7e-20 101.3 197 36.5
GSVIVG01001118001 Vitis vinifera HOM05D004039 ORTHO05D011171 2.9e-19 99.4 177 37.9
CDE02G3752 Ceratophyllum demersum HOM05D000742 ORTHO05D011171 2.3e-16 89.7 216 33.3
Thecc.02G188800 Theobroma cacao HOM05D009820 ORTHO05D011171 3.0e-16 89.4 210 31.4
Gohir.D02G176500 Gossypium hirsutum HOM05D009820 ORTHO05D011171 5.2e-16 88.6 209 32.5
CDE06G0636 Ceratophyllum demersum HOM05D009820 ORTHO05D011171 2.0e-15 86.7 189 35.4
RcHm_v2.0_Chr4g0428451 Rosa chinensis HOM05D009820 ORTHO05D011171 2.0e-15 86.7 199 33.7
FAN17G1765 Fragaria x ananassa HOM05D009820 ORTHO05D011171 2.6e-15 86.3 192 35.9
Gohir.A03G153600 Gossypium hirsutum HOM05D009820 ORTHO05D011171 5.7e-15 85.1 216 31.5
Gorai.005G198200 Gossypium raimondii HOM05D009820 ORTHO05D011171 5.7e-15 85.1 216 31.5
FAN07G1429 Fragaria x ananassa HOM05D009820 ORTHO05D011171 1.7e-14 83.6 199 33.7
Prupe.1G211900 Prunus persica HOM05D009820 ORTHO05D011171 1.7e-14 83.6 173 37.6
FvH4_4g22220 Fragaria vesca HOM05D009820 ORTHO05D011171 8.3e-14 81.3 199 33.2
FAN12G0969 Fragaria x ananassa HOM05D009820 ORTHO05D011171 8.3e-14 81.3 199 33.2
FAN12G3761 Fragaria x ananassa HOM05D009820 ORTHO05D011171 8.3e-14 81.3 199 33.2
Aqoxy271s004 Aquilegia oxysepala HOM05D000742 ORTHO05D011171 2.4e-13 79.7 64 60.9
Eucgr.J01652 Eucalyptus grandis HOM05D009820 ORTHO05D011171 3.5e-12 75.9 64 57.8
CANSAT25G0662 Cannabis sativa HOM05D009820 ORTHO05D011171 4.5e-12 75.5 101 44.6
MBI07_g42008_MAGBIO Magnolia biondii HOM05D000742 ORTHO05D011171 1.3e-11 73.9 64 53.1
Nn3g16209 Nelumbo nucifera HOM05D000742 ORTHO05D011171 1.5e-10 70.5 96 42.7
PGR119G0868 Punica granatum HOM05D009820 ORTHO05D011171 2.5e-10 69.7 159 34.6
Migut.L01317 Erythranthe guttata HOM05D000742 ORTHO05D003741 4.2e-10 68.9 232 26.3
CSS0021678 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D003741 1.2e-09 67.4 247 27.5
Ciclev10032573m.g Citrus clementina HOM05D000742 ORTHO05D003741 1.0e-08 64.3 238 26.1
Cc11_g13280 Coffea canephora HOM05D000742 ORTHO05D003741 1.8e-08 63.5 239 23.8
Nitab4.5_0002151g0060 Nicotiana tabacum HOM05D000742 ORTHO05D003741 1.8e-08 63.5 231 26.0
PSO591G0105 Papaver somniferum HOM05D009820 ORTHO05D011171 3.0e-08 62.8 105 36.2
SEGI_34196 Sequoiadendron giganteum HOM05D000742 ORTHO05D003741 3.0e-08 62.8 68 47.1
Aqoxy3G00703 Aquilegia oxysepala HOM05D000742 ORTHO05D003741 4.0e-08 62.4 235 26.0
Lj6C792T0 Lonicera japonica HOM05D000742 ORTHO05D003741 4.0e-08 62.4 230 25.2
Duzib251G0013 Durio zibethinus HOM05D000742 ORTHO05D003741 5.2e-08 62.0 238 24.8
PSO832G1700 Papaver somniferum HOM05D009820 ORTHO05D011171 8.8e-08 61.2 105 36.2
Ca_02742_v3 Cicer arietinum L. HOM05D000742 ORTHO05D003741 1.2e-07 60.8 56 44.6
Aqoxy6G02089 Aquilegia oxysepala HOM05D000742 ORTHO05D003741 2.0e-07 60.1 203 25.6
Nitab4.5_0003586g0010 Nicotiana tabacum HOM05D000742 ORTHO05D003741 2.0e-07 60.1 230 25.2
Psat3g196400 Pisum sativum HOM05D000742 ORTHO05D003741 2.0e-07 60.1 56 42.9
GSVIVG01020030001 Vitis vinifera HOM05D000742 ORTHO05D003741 2.0e-07 60.1 204 28.4
Glyma.18G258600 Glycine max HOM05D000742 ORTHO05D003741 2.6e-07 59.7 55 45.5
Sc11g0007020 Simmondsia chinensis HOM05D000742 ORTHO05D003741 2.6e-07 59.7 232 25.9
Cpa.g.sc14.16 Carica papaya HOM05D000742 ORTHO05D003741 3.4e-07 59.3 56 41.1
AUR62034388 Chenopodium quinoa HOM05D000742 ORTHO05D003741 3.4e-07 59.3 231 24.7
ECA246G4740 Erigeron canadensis HOM05D000742 ORTHO05D003741 3.4e-07 59.3 236 23.7
Glyma.09G239200 Glycine max HOM05D000742 ORTHO05D003741 3.4e-07 59.3 55 45.5
Medtr7g010100 Medicago truncatula HOM05D000742 ORTHO05D003741 3.4e-07 59.3 56 41.1
Nitab4.5_0000274g0110 Nicotiana tabacum HOM05D000742 ORTHO05D003741 4.4e-07 58.9 238 26.5
Aqoxy3G03331 Aquilegia oxysepala HOM05D000742 ORTHO05D003741 5.7e-07 58.5 231 24.7
Nitab4.5_0009386g0020 Nicotiana tabacum HOM05D000742 ORTHO05D003741 5.7e-07 58.5 240 26.2
Oeu000619.1 Olea europaea HOM05D000742 ORTHO05D003741 5.7e-07 58.5 238 25.6
Zm00001eb068910 Zea mays HOM05D000742 ORTHO05D003741 5.7e-07 58.5 199 27.6
CANSAT64G2914 Cannabis sativa HOM05D000742 ORTHO05D003741 7.5e-07 58.2 242 23.1
AUR62039828 Chenopodium quinoa HOM05D000742 ORTHO05D003741 7.5e-07 58.2 231 24.7
SGA_v2.0_scaffold18G08515 Striga asiatica HOM05D000742 ORTHO05D000924 7.5e-07 58.2 196 27.0
Hma1.2p1_0572F.1_g181190 Hydrangea macrophylla HOM05D000742 ORTHO05D000924 9.8e-07 57.8 188 24.5
Hma1.2p1_3278F.1_g334813 Hydrangea macrophylla HOM05D000742 ORTHO05D000924 9.8e-07 57.8 188 24.5
Lsat_1_v5_gn_8_52100 Lactuca sativa HOM05D000742 ORTHO05D003741 9.8e-07 57.8 207 24.6
Rhsim10G0041000 Rhododendron simsii HOM05D000742 ORTHO05D003741 9.8e-07 57.8 236 25.8
VMungo1383G2053 Vigna mungo HOM05D000742 ORTHO05D003741 1.3e-06 57.4 55 41.8
Gohir.D02G124400 Gossypium hirsutum HOM05D000742 ORTHO05D003741 1.7e-06 57.0 238 24.4
Hund13224 Selenicereus undatus HOM05D000742 ORTHO05D003741 1.7e-06 57.0 228 24.1
SEGI_14673 Sequoiadendron giganteum HOM05D000742 ORTHO05D003741 1.7e-06 57.0 57 43.9
Solyc05g007200.4 Solanum lycopersicum HOM05D000742 ORTHO05D003741 1.7e-06 57.0 231 22.9
SGA_v2.0_scaffold6G03152 Striga asiatica HOM05D000742 ORTHO05D000924 1.7e-06 57.0 173 26.0
AT1G14340 Arabidopsis thaliana HOM05D000742 ORTHO05D003741 2.2e-06 56.6 230 24.8
CiPaw.05G137700 Carya illinoinensis HOM05D000742 ORTHO05D003741 2.2e-06 56.6 237 24.5
Sopen05g003160 Solanum pennellii HOM05D000742 ORTHO05D003741 2.2e-06 56.6 231 22.5
Phvul.008G041900 Phaseolus vulgaris HOM05D000742 ORTHO05D003741 2.8e-06 56.2 55 41.8
THA.LOC104824083 Tarenaya hassleriana HOM05D000742 ORTHO05D003741 2.8e-06 56.2 232 23.7
Eucgr.J01216 Eucalyptus grandis HOM05D000742 ORTHO05D003741 3.7e-06 55.8 56 42.9
SalBow8G1497 Salvia bowleyana HOM05D000742 ORTHO05D003741 3.7e-06 55.8 231 24.2
Solyc02g067390.3 Solanum lycopersicum HOM05D000742 ORTHO05D003741 3.7e-06 55.8 237 25.3
TWI18G1073 Tripterygium wilfordii HOM05D000742 ORTHO05D003741 3.7e-06 55.8 230 24.3
Cfa026230 Carpinus fangiana HOM05D000742 ORTHO05D126223 4.9e-06 55.5 72 43.1
FAN17G1148 Fragaria x ananassa HOM05D000742 ORTHO05D003741 4.9e-06 55.5 231 24.7
FAN22G1453 Fragaria x ananassa HOM05D000742 ORTHO05D003741 4.9e-06 55.5 231 24.7
Peaxi162Scf00503g00418 Petunia axillaris HOM05D000742 ORTHO05D003741 4.9e-06 55.5 230 23.5
SalBow2G0828 Salvia bowleyana HOM05D000742 ORTHO05D003741 4.9e-06 55.5 237 24.1
Sopen02g016530 Solanum pennellii HOM05D000742 ORTHO05D003741 4.9e-06 55.5 237 24.9
PGSC0003DMG400006894 Solanum tuberosum HOM05D000742 ORTHO05D003741 4.9e-06 55.5 237 25.3
TWI32G0316 Tripterygium wilfordii HOM05D000742 ORTHO05D000924 4.9e-06 55.5 61 41.0
ATR0564G409 Amborella trichopoda HOM05D000742 ORTHO05D003741 6.3e-06 55.1 229 23.6
Gorai.005G139800 Gossypium raimondii HOM05D000742 ORTHO05D003741 6.3e-06 55.1 238 23.9
TWI34G1045 Tripterygium wilfordii HOM05D000742 ORTHO05D000924 6.3e-06 55.1 57 42.1
vmacro05717 Vaccinium macrocarpon HOM05D000742 ORTHO05D003741 6.3e-06 55.1 236 25.4
Atru.chr11.1830 Acer truncatum HOM05D000742 ORTHO05D003741 8.3e-06 54.7 222 24.8
arahy.Tifrunner.gnm1.ann1.DBBB2T Arachis hypogaea HOM05D000742 ORTHO05D003741 8.3e-06 54.7 234 26.1
Lj1g0009798 Lotus japonicus HOM05D000742 ORTHO05D003741 8.3e-06 54.7 64 39.1
Os04g0641400 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D003741 8.3e-06 54.7 57 40.4
PGR102G1291 Punica granatum HOM05D000742 ORTHO05D003741 8.3e-06 54.7 237 23.6
PGSC0003DMG400025609 Solanum tuberosum HOM05D000742 ORTHO05D003741 8.3e-06 54.7 231 22.5


User provided reference genes

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