Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022279 Vanilla planifolia HOM05D006976 ORTHO05D008761 8.1e-73 276.9 137 100.0
HPP92_028424 Vanilla planifolia HOM05D006976 ORTHO05D008761 9.0e-72 273.5 136 98.5
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 6.1e-44 181.0 136 65.4
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 1.4e-43 179.9 136 62.5
Gohir.D01G101878 Gossypium hirsutum HOM05D006976 ORTHO05D008761 8.8e-43 177.2 136 64.0
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 1.5e-42 176.4 138 63.8
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 2.0e-42 176.0 136 64.0
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 2.5e-42 175.6 136 64.0
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 2.5e-42 175.6 136 64.0
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 2.5e-42 175.6 136 64.0
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 2.5e-42 175.6 136 64.0
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 2.5e-42 175.6 136 64.0
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 2.5e-42 175.6 136 64.0
HanXRQChr13g0421821 Helianthus annuus HOM05D006976 ORTHO05D008761 2.5e-42 175.6 136 64.0
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 2.5e-42 175.6 136 64.0
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 2.5e-42 175.6 136 64.0
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 2.5e-42 175.6 136 64.0
HanXRQChr11g0345161 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-42 175.3 136 64.0
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 3.3e-42 175.3 138 65.9
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 4.3e-42 174.9 136 62.5
Lj1P303T18 Lonicera japonica HOM05D006976 ORTHO05D008761 7.4e-42 174.1 135 63.0
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 9.7e-42 173.7 136 61.0
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 1.3e-41 173.3 134 61.2
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.3e-41 173.3 138 65.2
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 8.2e-41 170.6 136 62.5
Hma1.2p1_1409F.1_g281660 Hydrangea macrophylla HOM05D006976 ORTHO05D008761 1.8e-40 169.5 136 61.0
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 3.1e-40 168.7 138 61.6
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 4.1e-40 168.3 136 60.3
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 5.3e-40 167.9 136 61.8
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 1.2e-39 166.8 135 61.5
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 1.2e-39 166.8 136 58.8
TAR633G2101 Trochodendron aralioides HOM05D006976 ORTHO05D008761 1.2e-39 166.8 120 65.8
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 3.4e-39 165.2 138 61.6
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 5.9e-39 164.5 135 60.0
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 1.0e-38 163.7 138 61.6
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 1.0e-38 163.7 138 61.6
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 1.0e-38 163.7 138 61.6
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 1.0e-38 163.7 138 61.6
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 1.0e-38 163.7 138 61.6
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 1.3e-38 163.3 138 60.9
GSVIVG01030620001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.3e-38 163.3 127 61.4
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 2.9e-38 162.2 135 60.7
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 2.9e-38 162.2 136 57.4
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 6.5e-38 161.0 135 57.8
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 8.5e-38 160.6 132 61.4
Gorai.001G104700 Gossypium raimondii HOM05D006976 ORTHO05D008761 8.5e-38 160.6 119 63.9
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.1e-37 160.2 136 60.3
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 1.4e-37 159.8 136 55.9
Gohir.D07G097266 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.9e-37 159.5 117 64.1
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 2.5e-37 159.1 138 60.1
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 5.5e-37 157.9 136 56.6
BolSC49t61182H Brassica oleracea HOM05D006976 ORTHO05D008761 1.2e-36 156.8 134 60.4
Solyc00g500020.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 1.2e-36 156.8 136 57.4
Solyc00g500067.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 1.2e-36 156.8 136 57.4
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 2.1e-36 156.0 138 61.6
Medtr5g019520 Medicago truncatula HOM05D006976 ORTHO05D008761 1.4e-35 153.3 136 55.9
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 2.3e-35 152.5 136 55.9
BolSC35t60647H Brassica oleracea HOM05D006976 ORTHO05D008761 6.7e-35 151.0 126 61.9
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 2.0e-34 149.4 136 55.9
CAN.G16.7 Capsicum annuum HOM05D006976 ORTHO05D008761 3.7e-33 145.2 136 52.9
Psat0s2288g0200 Pisum sativum HOM05D006976 ORTHO05D008761 3.7e-33 145.2 123 56.9
Psat0s2754g0120 Pisum sativum HOM05D000806 ORTHO05D002324 3.7e-33 145.2 123 56.9
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 9.1e-32 140.6 136 55.1
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 2.6e-31 139.0 99 67.7
BraSC59t46590Z Brassica rapa HOM05D006976 ORTHO05D008761 1.5e-26 123.2 103 60.2
Oeu028777.1 Olea europaea HOM05D000806 ORTHO05D002324 5.7e-26 121.3 101 54.5
AL2G21560 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.3e-25 120.2 138 50.0
EL10Ac4g09265 Beta vulgaris HOM05D006976 ORTHO05D008761 1.1e-24 117.1 85 68.2
GSVIVG01017636001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.0e-22 110.5 81 66.7
Gohir.A01G204050 Gossypium hirsutum HOM05D006976 ORTHO05D008761 5.0e-22 108.2 85 60.0
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 7.2e-21 104.4 76 60.5
Peaxi162Scf00021g00087 Petunia axillaris HOM05D000806 ORTHO05D002324 1.6e-20 103.2 82 58.5
Peaxi162Scf00413g00828 Petunia axillaris HOM05D000806 ORTHO05D002324 3.6e-20 102.1 86 59.3
Gohir.D02G130401 Gossypium hirsutum HOM05D006976 ORTHO05D008761 4.7e-20 101.7 83 61.4
Oeu039082.1 Olea europaea HOM05D006976 ORTHO05D008761 4.7e-20 101.7 84 54.8
Gorai.005G146300 Gossypium raimondii HOM05D006976 ORTHO05D008761 5.2e-19 98.2 83 59.0
HanXRQChr08g0209641 Helianthus annuus HOM05D006976 ORTHO05D008761 1.3e-17 93.6 77 57.1
HanXRQChr02g0044891 Helianthus annuus HOM05D006976 ORTHO05D008761 3.7e-17 92.0 65 69.2
Sc03g0010000 Simmondsia chinensis HOM05D006976 ORTHO05D008761 6.3e-17 91.3 76 56.6
HanXRQChr05g0161171 Helianthus annuus HOM05D006976 ORTHO05D008761 1.8e-16 89.7 65 67.7
Nn010s41442 Nelumbo nucifera HOM05D006976 ORTHO05D008761 2.7e-15 85.9 65 64.6
BolSC29t60590H Brassica oleracea HOM05D006976 ORTHO05D008761 2.2e-14 82.8 65 61.5
BolSC46t61001H Brassica oleracea HOM05D006976 ORTHO05D008761 2.2e-14 82.8 65 61.5
Prupe.7G029500 Prunus persica HOM05D006976 ORTHO05D008761 6.5e-14 81.3 65 58.5
Migut.G01116 Erythranthe guttata HOM05D006976 ORTHO05D008761 5.5e-13 78.2 86 48.8
Lalb_Chr18g0049641 Lupinus albus HOM05D006976 ORTHO05D008761 5.5e-13 78.2 69 56.5
Nn010s41437 Nelumbo nucifera HOM05D006976 ORTHO05D008761 9.4e-13 77.4 55 61.8
Medtr3g111320 Medicago truncatula HOM05D006976 ORTHO05D008761 1.8e-11 73.2 65 52.3
Hund10572 Selenicereus undatus HOM05D006976 ORTHO05D008761 1.8e-11 73.2 64 56.2
BNapus_Darmor_BZH_scaffold_253p00220 Brassica napus HOM05D000806 ORTHO05D002324 4.0e-11 72.0 54 63.0
Lalb_Chr03g0036051 Lupinus albus HOM05D006976 ORTHO05D008761 1.2e-10 70.5 55 58.2
Gorai.004G088500 Gossypium raimondii HOM05D006976 ORTHO05D008761 1.5e-10 70.1 93 43.0
Gorai.007G243600 Gossypium raimondii HOM05D000806 ORTHO05D002324 1.5e-10 70.1 46 73.9
TPR.G11768 Trifolium pratense HOM05D006976 ORTHO05D008761 1.5e-10 70.1 65 50.8
BraSC103t45467Z Brassica rapa HOM05D006976 ORTHO05D008761 2.0e-10 69.7 56 62.5
Oeu012774.1 Olea europaea HOM05D006976 ORTHO05D008761 2.6e-10 69.3 62 56.5
Lalb_Chr03g0039211 Lupinus albus HOM05D006976 ORTHO05D008761 7.5e-10 67.8 49 61.2
Lalb_Chr23g0274511 Lupinus albus HOM05D006976 ORTHO05D008761 1.3e-09 67.0 95 43.2
Eucgr.I02539 Eucalyptus grandis HOM05D006976 ORTHO05D008761 4.8e-09 65.1 65 53.8
C09p40410 Brassica napus HOM05D006976 ORTHO05D008761 8.3e-09 64.3 58 56.9
Gorai.002G160100 Gossypium raimondii HOM05D006976 ORTHO05D008761 1.1e-08 63.9 47 66.0
arahy.Tifrunner.gnm1.ann1.Z0Q6DR Arachis hypogaea HOM05D006976 ORTHO05D008761 5.4e-08 61.6 46 65.2
HPP92_028095 Vanilla planifolia HOM05D009170 ORTHO05D012011 2.7e-07 59.3 37 81.1
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 3.5e-07 58.9 44 65.9
EL10As15g24128 Beta vulgaris HOM05D000806 ORTHO05D002324 7.7e-07 57.8 38 73.7
FvH4_3g27991 Fragaria vesca HOM05D006976 ORTHO05D008761 7.7e-07 57.8 61 52.5
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 8.6e-06 54.3 44 56.8


User provided reference genes

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