Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 7.9e-51 203.4 95 100.0
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 3.9e-34 147.9 95 74.7
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 5.2e-34 147.5 93 72.0
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 5.2e-34 147.5 93 74.2
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 1.1e-33 146.4 93 75.3
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 1.5e-33 146.0 92 76.1
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 1.5e-33 146.0 92 72.8
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 1.5e-33 146.0 93 74.2
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 2.0e-33 145.6 93 75.3
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 2.6e-33 145.2 94 73.4
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 2.6e-33 145.2 92 72.8
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 3.3e-33 144.8 93 74.2
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 3.3e-33 144.8 91 74.7
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 4.4e-33 144.4 93 73.1
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 5.7e-33 144.1 93 76.3
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 5.7e-33 144.1 93 74.2
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 7.4e-33 143.7 93 74.2
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 7.4e-33 143.7 93 72.0
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 9.7e-33 143.3 93 73.1
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 9.7e-33 143.3 93 72.0
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 9.7e-33 143.3 93 73.1
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 1.7e-32 142.5 93 72.0
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 1.7e-32 142.5 93 71.0
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 1.7e-32 142.5 93 74.2
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 1.7e-32 142.5 93 74.2
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 1.7e-32 142.5 94 72.3
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 2.2e-32 142.1 93 74.2
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 2.2e-32 142.1 93 71.0
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 2.8e-32 141.7 93 69.9
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 2.8e-32 141.7 93 73.1
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 2.8e-32 141.7 93 71.0
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 3.7e-32 141.4 93 73.1
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 3.7e-32 141.4 93 71.0
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 3.7e-32 141.4 93 72.0
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 3.7e-32 141.4 93 72.0
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 4.8e-32 141.0 93 73.1
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 4.8e-32 141.0 93 72.0
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 4.8e-32 141.0 93 72.0
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 4.8e-32 141.0 93 71.0
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 4.8e-32 141.0 93 69.9
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 4.8e-32 141.0 93 72.0
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 6.3e-32 140.6 93 72.0
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 6.3e-32 140.6 93 72.0
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 6.3e-32 140.6 93 73.1
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 8.2e-32 140.2 93 71.0
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 8.2e-32 140.2 93 73.1
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 8.2e-32 140.2 93 71.0
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 8.2e-32 140.2 93 69.9
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 8.2e-32 140.2 93 74.2
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 8.2e-32 140.2 95 70.5
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 1.1e-31 139.8 93 72.0
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 1.1e-31 139.8 95 70.5
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 1.4e-31 139.4 93 72.0
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 1.4e-31 139.4 93 71.0
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 1.8e-31 139.0 93 73.1
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 1.8e-31 139.0 94 73.4
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 2.4e-31 138.7 94 70.2
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 2.4e-31 138.7 93 71.0
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 2.4e-31 138.7 93 69.9
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 3.1e-31 138.3 93 71.0
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 3.1e-31 138.3 93 72.0
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 3.1e-31 138.3 91 72.5
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 4.1e-31 137.9 92 70.7
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 5.3e-31 137.5 93 69.9
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 5.3e-31 137.5 93 69.9
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 5.3e-31 137.5 93 68.8
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 5.3e-31 137.5 92 69.6
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 5.3e-31 137.5 92 69.6
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 7.0e-31 137.1 92 70.7
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 7.0e-31 137.1 92 70.7
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 9.1e-31 136.7 94 71.3
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 1.2e-30 136.3 93 69.9
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 1.2e-30 136.3 92 69.6
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 1.6e-30 136.0 93 67.7
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 1.6e-30 136.0 94 70.2
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 1.6e-30 136.0 93 69.9
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 3.5e-30 134.8 94 69.1
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 3.5e-30 134.8 93 69.9
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 4.5e-30 134.4 94 69.1
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 5.9e-30 134.0 93 68.8
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 7.7e-30 133.7 93 68.8
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 7.7e-30 133.7 93 69.9
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 7.7e-30 133.7 106 66.0
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 1.0e-29 133.3 94 68.1
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 1.0e-29 133.3 94 68.1
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 1.0e-29 133.3 94 68.1
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 1.0e-29 133.3 94 68.1
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 2.2e-29 132.1 95 67.4
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 2.9e-29 131.7 95 66.3
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 2.9e-29 131.7 93 65.6
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 2.9e-29 131.7 94 68.1
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 2.9e-29 131.7 93 67.7
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 2.9e-29 131.7 93 67.7
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 2.9e-29 131.7 93 67.7
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 3.8e-29 131.3 94 67.0
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 5.0e-29 131.0 94 67.0
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 5.0e-29 131.0 93 67.7
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 1.5e-28 129.4 105 61.0
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 1.9e-28 129.0 92 66.3
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 5.5e-28 127.5 94 59.6
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 9.4e-28 126.7 91 68.1
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 8.0e-27 123.6 93 63.4
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 4.0e-26 121.3 84 66.7
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 7.5e-25 117.1 70 77.1
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 1.7e-24 115.9 84 64.3
FAN23G1662 Fragaria x ananassa HOM05D006419 ORTHO05D008096 2.8e-24 115.2 65 81.5
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 1.1e-23 113.2 91 59.3
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 4.1e-23 111.3 65 78.5
Carub.0005s2776 Capsella rubella HOM05D006419 ORTHO05D008096 5.3e-23 110.9 67 77.6
FAN28G0164 Fragaria x ananassa HOM05D006419 ORTHO05D008096 7.0e-23 110.5 61 82.0
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 1.6e-22 109.4 92 53.3
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 2.7e-22 108.6 81 65.4
PRCOL_00003278 Prasinoderma coloniale HOM05D006419 ORTHO05D008096 2.7e-22 108.6 96 59.4
FAN28G1401 Fragaria x ananassa HOM05D006419 ORTHO05D008096 2.7e-19 98.6 74 66.2
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 3.6e-19 98.2 94 55.3
Haze_27740 Corylus avellana HOM05D006419 ORTHO05D008096 5.7e-17 90.9 94 47.9
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 3.1e-15 85.1 65 66.2
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 2.0e-14 82.4 66 60.6
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 1.5e-12 76.3 53 66.0
Zm00001eb320180 Zea mays HOM05D006419 ORTHO05D008096 2.8e-08 62.0 55 56.4
SHI13486 Sapria himalayana HOM05D006419 ORTHO05D008096 1.6e-06 56.2 41 63.4
Dinv28502 Davidia involucrata HOM05D000001 ORTHO05D000003 7.8e-06 53.9 51 52.9


User provided reference genes

Program Settings