Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 9.5e-164 580.1 291 100.0
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 9.1e-98 360.9 256 68.4
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.0e-96 357.5 242 72.3
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 6.5e-96 354.8 304 61.2
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 1.9e-95 353.2 241 70.5
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 3.2e-95 352.4 303 60.7
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 3.6e-94 349.0 259 66.4
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 8.0e-94 347.8 297 59.9
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 1.4e-93 347.1 299 62.5
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 1.8e-93 346.7 241 69.7
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 1.8e-93 346.7 272 61.4
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 3.9e-93 345.5 243 69.5
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 3.9e-93 345.5 241 69.7
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 8.8e-93 344.4 259 66.8
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.1e-92 344.0 241 69.3
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 1.1e-92 344.0 262 63.4
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 4.4e-92 342.0 294 60.5
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 4.4e-92 342.0 257 67.3
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 4.4e-92 342.0 295 60.3
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 5.7e-92 341.7 297 60.6
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 2.2e-91 339.7 262 62.6
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 4.8e-91 338.6 241 68.9
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 4.8e-91 338.6 300 59.3
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 4.8e-91 338.6 300 59.3
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 8.2e-91 337.8 285 60.7
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 1.4e-90 337.0 241 66.8
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 2.4e-90 336.3 267 62.5
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 3.1e-90 335.9 300 58.0
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 3.1e-90 335.9 259 64.9
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 5.3e-90 335.1 242 67.4
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 7.0e-90 334.7 301 59.5
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 1.2e-89 334.0 302 57.3
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 1.6e-89 333.6 244 67.2
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 1.6e-89 333.6 241 66.8
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 2.0e-89 333.2 270 61.5
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 4.5e-89 332.0 240 67.5
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 7.7e-89 331.3 267 62.9
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 1.0e-88 330.9 300 58.0
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.0e-88 330.9 290 59.0
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 1.7e-88 330.1 271 60.9
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 1.7e-88 330.1 271 60.9
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 2.2e-88 329.7 271 60.9
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 2.2e-88 329.7 244 63.9
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 2.2e-88 329.7 244 63.9
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 2.9e-88 329.3 267 62.2
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 2.9e-88 329.3 242 66.5
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 5.0e-88 328.6 299 57.9
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 6.5e-88 328.2 287 58.9
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 8.5e-88 327.8 294 58.8
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.9e-87 326.6 240 65.4
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 1.9e-87 326.6 241 65.6
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 1.9e-87 326.6 258 62.0
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 2.5e-87 326.2 299 56.5
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 2.5e-87 326.2 272 61.0
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.2e-87 325.9 244 66.0
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 4.2e-87 325.5 244 64.3
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 4.2e-87 325.5 294 58.5
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 5.5e-87 325.1 244 66.0
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 7.2e-87 324.7 248 63.3
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.6e-86 323.6 240 65.8
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 3.6e-86 322.4 273 61.9
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 8.0e-86 321.2 244 64.3
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.0e-85 320.9 279 58.8
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 2.3e-85 319.7 283 58.3
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 3.0e-85 319.3 241 66.4
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 8.8e-85 317.8 213 70.0
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 1.2e-84 317.4 285 57.5
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 1.2e-84 317.4 277 60.6
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 1.3e-83 313.9 266 59.8
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 2.8e-83 312.8 266 59.4
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 3.7e-83 312.4 242 63.6
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 4.8e-83 312.0 244 61.9
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 4.8e-83 312.0 244 64.3
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 6.3e-83 311.6 241 63.5
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 8.3e-83 311.2 241 63.1
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 4.1e-82 308.9 254 60.2
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 3.5e-81 305.8 241 61.0
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 4.5e-81 305.4 241 60.6
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 5.0e-80 302.0 241 60.2
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 6.5e-80 301.6 235 63.4
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 6.5e-80 301.6 241 60.2
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.6e-78 297.0 287 55.1
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.6e-78 297.0 283 54.1
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 1.3e-75 287.3 241 61.0
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 1.3e-75 287.3 211 63.0
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 2.7e-73 279.6 216 64.8
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 5.0e-72 275.4 357 45.9
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 2.1e-70 270.0 213 63.8
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 4.7e-70 268.9 241 56.0
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 6.1e-70 268.5 182 70.9
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 1.0e-69 267.7 241 58.5
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 1.0e-69 267.7 299 52.5
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.0e-68 263.5 230 60.9
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 2.8e-67 259.6 215 59.1
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 2.4e-66 256.5 232 59.5
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 3.2e-66 256.1 271 49.8
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 8.0e-62 241.5 157 75.8
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 9.8e-60 234.6 211 59.7
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 9.8e-60 234.6 211 59.7
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.3e-56 224.2 167 65.9
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 3.9e-56 222.6 190 57.4
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 1.4e-53 214.2 303 42.2
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 1.4e-53 214.2 243 50.6
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 5.6e-47 192.2 175 58.3
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 1.1e-42 177.9 148 60.8
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.7e-40 170.6 100 76.0
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 7.1e-34 148.7 281 35.2
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 7.3e-31 138.7 106 63.2
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 1.5e-28 131.0 196 38.3
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 4.6e-09 66.2 101 36.6
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.8e-08 64.3 67 52.2


User provided reference genes

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