Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021600 Vanilla planifolia HOM05D001512 ORTHO05D428615 8.4e-61 236.9 123 100.0
HPP92_007008 Vanilla planifolia HOM05D001512 ORTHO05D015886 4.7e-11 71.6 60 60.0
MBI11_g41401_MAGBIO Magnolia biondii HOM05D001512 ORTHO05D001574 5.1e-10 68.2 59 57.6
EL10Ac5g11397 Beta vulgaris HOM05D001512 ORTHO05D001574 2.6e-09 65.9 60 58.3
TAR622G1057 Trochodendron aralioides HOM05D001512 ORTHO05D001574 2.6e-09 65.9 59 59.3
SGA_v2.0_scaffold215G42347 Striga asiatica HOM05D001512 ORTHO05D001574 5.7e-09 64.7 60 53.3
HPP92_025260 Vanilla planifolia HOM05D001512 ORTHO05D001574 5.7e-09 64.7 60 55.0
Aqoxy2G02638 Aquilegia oxysepala HOM05D001512 ORTHO05D015886 9.7e-09 63.9 74 45.9
Aqoxy3G00665 Aquilegia oxysepala HOM05D001512 ORTHO05D015886 9.7e-09 63.9 74 45.9
Aqoxy5G03323 Aquilegia oxysepala HOM05D001512 ORTHO05D001574 9.7e-09 63.9 74 45.9
Cpa.g.sc13.98 Carica papaya HOM05D001512 ORTHO05D001574 9.7e-09 63.9 60 53.3
Migut.I00538 Erythranthe guttata HOM05D001512 ORTHO05D001574 1.3e-08 63.5 60 55.0
Ah.11g045480 Amaranthus hybridus HOM05D001512 ORTHO05D001574 1.7e-08 63.2 60 53.3
COL.COLO4_28145 Corchorus olitorius HOM05D001512 ORTHO05D001574 1.7e-08 63.2 62 56.5
Duzib068G0263 Durio zibethinus HOM05D001512 ORTHO05D001574 1.7e-08 63.2 60 53.3
Manes.14G050200 Manihot esculenta HOM05D001512 ORTHO05D001574 1.7e-08 63.2 59 55.9
Nn3g16432 Nelumbo nucifera HOM05D001512 ORTHO05D001574 1.7e-08 63.2 59 54.2
Atru.chr6.1814 Acer truncatum HOM05D001512 ORTHO05D001574 2.2e-08 62.8 60 53.3
CsaV3_1G000480 Cucumis sativus L. HOM05D001512 ORTHO05D001574 2.2e-08 62.8 60 53.3
Sabra12G0072900 Salix brachista HOM05D001512 ORTHO05D001574 2.2e-08 62.8 60 53.3
Gohir.A11G036700 Gossypium hirsutum HOM05D001512 ORTHO05D001574 2.8e-08 62.4 62 53.2
Gohir.D11G040000 Gossypium hirsutum HOM05D001512 ORTHO05D001574 2.8e-08 62.4 62 53.2
Gorai.007G043100 Gossypium raimondii HOM05D001512 ORTHO05D001574 2.8e-08 62.4 62 53.2
TWI39G1126 Tripterygium wilfordii HOM05D001512 ORTHO05D001574 2.8e-08 62.4 60 56.7
ATR0561G050 Amborella trichopoda HOM05D001512 ORTHO05D001574 3.7e-08 62.0 60 56.7
Ciclev10031167m.g Citrus clementina HOM05D001512 ORTHO05D001574 3.7e-08 62.0 60 51.7
PGR044G1660 Punica granatum HOM05D001512 ORTHO05D001574 3.7e-08 62.0 60 55.0
QL10p002635 Quercus lobata HOM05D001512 ORTHO05D001574 3.7e-08 62.0 60 55.0
CSS0031225 Camellia sinensis var. sinensis HOM05D001512 ORTHO05D001574 4.8e-08 61.6 62 53.2
ClCG06G017990 Citrullus lanatus HOM05D001512 ORTHO05D001574 4.8e-08 61.6 60 53.3
Duzib205G0934 Durio zibethinus HOM05D001512 ORTHO05D001574 4.8e-08 61.6 64 51.6
Dinv23161 Davidia involucrata HOM05D001512 ORTHO05D001574 6.3e-08 61.2 60 51.7
Hma1.2p1_0014F.1_g009290 Hydrangea macrophylla HOM05D001512 ORTHO05D001574 6.3e-08 61.2 60 53.3
vmacro16728 Vaccinium macrocarpon HOM05D001512 ORTHO05D001574 6.3e-08 61.2 60 46.7
GSVIVG01008562001 Vitis vinifera HOM05D001512 ORTHO05D001574 6.3e-08 61.2 73 46.6
Gohir.A03G053000 Gossypium hirsutum HOM05D001512 ORTHO05D001574 8.2e-08 60.8 77 45.5
Gohir.D07G054900 Gossypium hirsutum HOM05D001512 ORTHO05D001574 8.2e-08 60.8 60 50.0
Gorai.001G058100 Gossypium raimondii HOM05D001512 ORTHO05D001574 8.2e-08 60.8 60 50.0
Lj9A480T83 Lonicera japonica HOM05D001512 ORTHO05D001574 8.2e-08 60.8 73 45.2
Potri.012G099600 Populus trichocarpa HOM05D001512 ORTHO05D001574 8.2e-08 60.8 62 53.2
Actinidia08883 Actinidia chinensis HOM05D001512 ORTHO05D001574 1.1e-07 60.5 60 51.7
CANSAT80G1300 Cannabis sativa HOM05D001512 ORTHO05D001574 1.1e-07 60.5 61 50.8
CiPaw.12G044200 Carya illinoinensis HOM05D001512 ORTHO05D001574 1.1e-07 60.5 60 50.0
MELO3C026200.2 Cucumis melo HOM05D001512 ORTHO05D001574 1.1e-07 60.5 60 51.7
Eucgr.K02712 Eucalyptus grandis HOM05D001512 ORTHO05D001574 1.1e-07 60.5 73 49.3
Gohir.D03G114100 Gossypium hirsutum HOM05D001512 ORTHO05D001574 1.1e-07 60.5 62 50.0
Lalb_Chr08g0237251 Lupinus albus HOM05D001512 ORTHO05D001574 1.1e-07 60.5 58 53.4
PSO017G3014 Papaver somniferum HOM05D001512 ORTHO05D001574 1.1e-07 60.5 60 53.3
Actinidia36819 Actinidia chinensis HOM05D001512 ORTHO05D001574 1.4e-07 60.1 60 51.7
HanXRQChr04g0102961 Helianthus annuus HOM05D001512 ORTHO05D001574 1.4e-07 60.1 62 51.6
Hund02449 Selenicereus undatus HOM05D001512 ORTHO05D001574 1.4e-07 60.1 58 55.2
Solyc12g032930.3 Solanum lycopersicum HOM05D001512 ORTHO05D001574 1.4e-07 60.1 59 52.5
Sopen12g013960 Solanum pennellii HOM05D001512 ORTHO05D001574 1.4e-07 60.1 59 52.5
CSS0002692 Camellia sinensis var. sinensis HOM05D001512 ORTHO05D001574 1.8e-07 59.7 62 51.6
Cc04_g10010 Coffea canephora HOM05D001512 ORTHO05D001574 1.8e-07 59.7 60 51.7
Phvul.009G165300 Phaseolus vulgaris HOM05D001512 ORTHO05D001574 1.8e-07 59.7 58 56.9
ECA232G4930 Erigeron canadensis HOM05D001512 ORTHO05D000989 2.4e-07 59.3 69 46.4
Lalb_Chr12g0202241 Lupinus albus HOM05D001512 ORTHO05D001574 2.4e-07 59.3 58 53.4
PSO478G3654 Papaver somniferum HOM05D001512 ORTHO05D001574 2.4e-07 59.3 60 51.7
CiPaw.11G006000 Carya illinoinensis HOM05D001512 ORTHO05D001574 3.1e-07 58.9 59 50.8
Haze_07154 Corylus avellana HOM05D001512 ORTHO05D001574 3.1e-07 58.9 60 51.7
Gorai.003G120400 Gossypium raimondii HOM05D001512 ORTHO05D001574 3.1e-07 58.9 62 48.4
Prupe.5G149700 Prunus persica HOM05D001512 ORTHO05D001574 3.1e-07 58.9 60 53.3
Thecc.03G130700 Theobroma cacao HOM05D001512 ORTHO05D001574 3.1e-07 58.9 62 50.0
unitig_27.g25093 Utricularia gibba HOM05D001512 ORTHO05D001574 3.1e-07 58.9 60 51.7
Zm00001eb169430 Zea mays HOM05D001512 ORTHO05D001574 3.1e-07 58.9 62 50.0
FAN13G0027 Fragaria x ananassa HOM05D001512 ORTHO05D001574 4.1e-07 58.5 63 54.0
Rhsim08G0191300 Rhododendron simsii HOM05D001512 ORTHO05D001574 4.1e-07 58.5 75 45.3
CDE05G1880 Ceratophyllum demersum HOM05D001512 ORTHO05D001574 5.3e-07 58.2 59 50.8
Manes.06G120600 Manihot esculenta HOM05D001512 ORTHO05D001574 5.3e-07 58.2 60 53.3
Nitab4.5_0003948g0010 Nicotiana tabacum HOM05D001512 ORTHO05D001574 5.3e-07 58.2 64 53.1
Zm00001eb364290 Zea mays HOM05D001512 ORTHO05D001574 5.3e-07 58.2 62 54.8
DCAR_007498 Daucus carota HOM05D001512 ORTHO05D001574 7.0e-07 57.8 60 50.0
Lj5A95T76 Lonicera japonica HOM05D001512 ORTHO05D001574 7.0e-07 57.8 61 50.8
VMungo1309G0322 Vigna mungo HOM05D001512 ORTHO05D001574 7.0e-07 57.8 58 51.7
Nitab4.5_0004542g0030 Nicotiana tabacum HOM05D001512 ORTHO05D001574 9.1e-07 57.4 66 51.5
Sed0016763 Sechium edule HOM05D001512 ORTHO05D001574 9.1e-07 57.4 61 52.5
CSS0030126 Camellia sinensis var. sinensis HOM05D001512 ORTHO05D001574 1.2e-06 57.0 62 51.6
CSS0032112 Camellia sinensis var. sinensis HOM05D001512 ORTHO05D001574 1.2e-06 57.0 62 51.6
Thhalv10016029m.g Eutrema salsugineum HOM05D001512 ORTHO05D015886 1.5e-06 56.6 75 48.0
MD06G1140500 Malus domestica HOM05D001512 ORTHO05D001574 1.5e-06 56.6 61 49.2
AUR62034845 Chenopodium quinoa HOM05D001512 ORTHO05D001574 2.0e-06 56.2 60 46.7
PGSC0003DMG402026974 Solanum tuberosum HOM05D001512 ORTHO05D001574 2.0e-06 56.2 75 48.0
BcaB02g09757 Brassica carinata HOM05D001512 ORTHO05D001574 2.6e-06 55.8 60 51.7
AUR62029590 Chenopodium quinoa HOM05D001512 ORTHO05D001574 2.6e-06 55.8 60 46.7
THA.LOC104821523 Tarenaya hassleriana HOM05D001512 ORTHO05D001574 2.6e-06 55.8 64 50.0
MD14G1155700 Malus domestica HOM05D001512 ORTHO05D001574 3.4e-06 55.5 63 52.4
Hund10150 Selenicereus undatus HOM05D001512 ORTHO05D001574 3.4e-06 55.5 60 48.3
Thhalv10013164m.g Eutrema salsugineum HOM05D001512 ORTHO05D001574 4.5e-06 55.1 73 46.6
FvH4_5g08490 Fragaria vesca HOM05D001512 ORTHO05D001574 4.5e-06 55.1 63 52.4
HanXRQChr16g0498061 Helianthus annuus HOM05D001512 ORTHO05D001574 4.5e-06 55.1 63 46.0
Nitab4.5_0002028g0010 Nicotiana tabacum HOM05D001512 ORTHO05D001574 4.5e-06 55.1 63 52.4
SalBow5G4742 Salvia bowleyana HOM05D001512 ORTHO05D001574 4.5e-06 55.1 60 45.0
A06p30120 Brassica napus HOM05D001512 ORTHO05D001574 5.9e-06 54.7 58 50.0
C03p62950 Brassica napus HOM05D001512 ORTHO05D001574 5.9e-06 54.7 58 50.0
BolC3t18549H Brassica oleracea HOM05D001512 ORTHO05D001574 5.9e-06 54.7 58 50.0
BraA06t25963Z Brassica rapa HOM05D001512 ORTHO05D001574 5.9e-06 54.7 58 50.0
CARHR257720 Cardamine hirsuta HOM05D001512 ORTHO05D001574 5.9e-06 54.7 58 51.7
FAN04G1433 Fragaria x ananassa HOM05D001512 ORTHO05D001574 5.9e-06 54.7 62 51.6
FAN18G0647 Fragaria x ananassa HOM05D001512 ORTHO05D001574 5.9e-06 54.7 63 50.8
arahy.Tifrunner.gnm1.ann1.PD6YD2 Arachis hypogaea HOM05D001512 ORTHO05D001574 7.7e-06 54.3 65 44.6
Ca_16055_v3 Cicer arietinum L. HOM05D001512 ORTHO05D001574 7.7e-06 54.3 61 49.2
Nitab4.5_0001678g0070 Nicotiana tabacum HOM05D001512 ORTHO05D001574 7.7e-06 54.3 64 51.6
THA.LOC104825021 Tarenaya hassleriana HOM05D001512 ORTHO05D001574 7.7e-06 54.3 60 48.3
Zm00001eb143070 Zea mays HOM05D001512 ORTHO05D001574 7.7e-06 54.3 63 50.8


User provided reference genes

Program Settings