Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 8.4e-103 377.1 199 100.0
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 8.7e-68 260.8 200 72.5
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 7.2e-62 241.1 200 66.5
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 2.3e-60 236.1 197 68.0
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 1.5e-59 233.4 204 66.2
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 1.5e-59 233.4 187 71.7
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 3.3e-59 232.3 199 64.8
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 7.4e-59 231.1 199 65.8
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 9.7e-59 230.7 198 65.7
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 2.8e-58 229.2 198 66.2
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 8.2e-58 227.6 200 66.0
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 1.8e-57 226.5 197 64.5
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 2.4e-57 226.1 199 63.8
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 3.1e-57 225.7 197 62.9
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.2e-56 223.8 200 65.0
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 2.0e-56 223.0 199 64.3
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 2.6e-56 222.6 200 64.0
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 2.6e-56 222.6 199 64.3
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 2.6e-56 222.6 199 64.3
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 2.6e-56 222.6 197 62.9
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 3.4e-56 222.2 192 65.1
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 4.5e-56 221.9 196 64.3
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 4.5e-56 221.9 199 63.3
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 7.7e-56 221.1 199 62.8
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 7.7e-56 221.1 199 64.3
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.0e-55 220.7 199 63.3
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 2.2e-55 219.5 197 61.9
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 2.2e-55 219.5 197 62.4
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 5.0e-55 218.4 199 63.8
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 5.0e-55 218.4 199 63.8
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 8.5e-55 217.6 199 63.3
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 1.1e-54 217.2 192 64.1
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.4e-54 216.9 198 62.1
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 1.4e-54 216.9 199 62.3
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.4e-54 216.9 199 61.8
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.4e-54 216.9 199 61.8
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 2.5e-54 216.1 200 63.5
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 2.5e-54 216.1 200 63.5
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 4.2e-54 215.3 199 62.3
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 7.2e-54 214.5 202 61.9
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 9.4e-54 214.2 199 61.3
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 9.4e-54 214.2 199 62.8
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 1.2e-53 213.8 199 62.8
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 1.6e-53 213.4 197 62.9
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 3.6e-53 212.2 199 60.3
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 4.7e-53 211.8 197 61.9
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 4.7e-53 211.8 199 62.3
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 1.0e-52 210.7 199 60.3
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 2.3e-52 209.5 199 62.3
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 3.0e-52 209.1 202 60.4
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 3.0e-52 209.1 198 61.1
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 5.2e-52 208.4 198 63.1
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 5.2e-52 208.4 199 62.8
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 8.8e-52 207.6 199 60.3
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 8.8e-52 207.6 199 61.8
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.1e-51 207.2 192 60.4
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.5e-51 206.8 203 60.1
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 4.4e-51 205.3 199 59.8
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 1.7e-50 203.4 201 59.2
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 2.8e-50 202.6 198 59.6
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 2.8e-50 202.6 197 60.4
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 2.8e-50 202.6 188 60.6
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 8.2e-50 201.1 200 59.5
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 3.1e-49 199.1 189 59.8
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 4.1e-49 198.7 198 61.6
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 5.3e-49 198.4 199 56.3
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.6e-48 196.8 199 56.8
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 2.6e-48 196.1 199 56.3
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.3e-47 193.7 200 57.0
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 1.7e-47 193.4 198 60.6
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 5.0e-47 191.8 199 52.3
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 5.0e-47 191.8 197 57.4
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 5.0e-47 191.8 197 56.3
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 1.1e-46 190.7 195 59.0
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.5e-46 190.3 187 58.3
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 2.5e-46 189.5 195 56.9
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 5.5e-46 188.3 201 58.7
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 5.5e-46 188.3 199 56.3
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 7.2e-46 188.0 197 58.4
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 4.7e-45 185.3 198 54.0
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 8.0e-45 184.5 199 56.3
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 8.0e-45 184.5 194 54.6
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 1.4e-44 183.7 199 59.8
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 1.8e-44 183.3 197 55.8
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 2.3e-44 183.0 182 59.9
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 4.0e-44 182.2 197 53.8
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 5.2e-44 181.8 200 56.0
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 1.2e-43 180.6 176 59.1
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 2.0e-43 179.9 220 51.4
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 5.7e-43 178.3 190 50.5
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 1.3e-42 177.2 198 55.1
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 2.8e-42 176.0 199 53.3
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 3.7e-42 175.6 192 48.4
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 6.3e-42 174.9 198 55.6
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 3.1e-41 172.6 181 54.7
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 1.2e-40 170.6 206 53.4
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 8.5e-39 164.5 199 52.8
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 1.5e-38 163.7 211 46.9
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 1.6e-37 160.2 199 50.3
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 4.7e-37 158.7 200 50.5
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 3.0e-36 156.0 201 52.7
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 2.0e-35 153.3 153 60.1
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 2.6e-35 152.9 193 46.1
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 3.4e-35 152.5 153 56.9
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 3.4e-35 152.5 192 49.0
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 5.7e-35 151.8 199 48.7
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 1.4e-33 147.1 201 44.8
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 1.4e-33 147.1 201 44.8
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 5.4e-33 145.2 198 47.5
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 1.2e-32 144.1 227 44.1
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 4.5e-32 142.1 209 43.1
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 1.0e-31 141.0 201 43.8
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 1.3e-31 140.6 210 46.2
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.2e-31 139.8 150 54.0
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 7.2e-30 134.8 153 54.2
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 1.8e-28 130.2 83 81.9
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 2.6e-27 126.3 147 54.4
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 7.5e-27 124.8 114 62.3
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 9.8e-27 124.4 178 43.8
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 2.2e-26 123.2 83 75.9
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 4.9e-26 122.1 83 74.7
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.6e-24 117.1 78 78.2
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 1.0e-23 114.4 116 57.8
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 1.9e-22 110.2 153 47.1
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 2.1e-21 106.7 153 47.1
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 1.8e-20 103.6 91 59.3
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 9.8e-19 97.8 163 42.9
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 9.8e-19 97.8 59 83.1
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 8.3e-18 94.7 102 52.9
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.1e-17 94.4 101 59.4
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 7.0e-17 91.7 86 60.5
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 1.3e-15 87.4 69 66.7
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 5.0e-15 85.5 96 49.0
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 6.6e-15 85.1 87 55.2
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 1.1e-14 84.3 80 58.8
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 2.8e-13 79.7 142 38.7
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 6.8e-12 75.1 201 33.3
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 3.7e-10 69.3 49 75.5
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 1.4e-09 67.4 185 29.7
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 9.2e-09 64.7 77 54.5
MD02G1004700 Malus domestica HOM05D005762 ORTHO05D006823 1.9e-06 57.0 49 53.1


User provided reference genes

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