Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 5.2e-262 907.1 447 100.0
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 7.6e-120 434.9 437 49.4
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 6.7e-116 421.8 416 51.0
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 1.9e-115 420.2 416 50.7
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 3.3e-115 419.5 420 48.6
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 9.6e-115 417.9 404 50.5
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 3.7e-114 416.0 444 46.6
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 3.7e-114 416.0 426 48.8
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 4.8e-114 415.6 440 48.0
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 6.2e-114 415.2 412 50.7
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 1.1e-113 414.5 410 48.5
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 6.9e-113 411.8 413 49.9
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 2.0e-112 410.2 404 49.0
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 3.4e-112 409.5 426 47.7
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 3.4e-112 409.5 426 47.9
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 4.5e-112 409.1 446 46.0
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 1.3e-111 407.5 426 49.1
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 3.8e-111 406.0 445 47.2
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 3.8e-111 406.0 407 49.9
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 6.4e-111 405.2 407 48.9
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 6.4e-111 405.2 424 49.3
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 6.4e-111 405.2 421 49.4
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 3.2e-110 402.9 444 47.1
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 9.3e-110 401.4 414 48.3
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 1.6e-109 400.6 446 47.3
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 3.5e-109 399.4 430 47.4
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.0e-108 397.9 429 47.8
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.0e-108 396.4 453 47.0
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.3e-107 392.5 451 47.0
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 4.8e-106 389.0 421 47.3
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 1.1e-105 387.9 407 47.2
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 1.4e-105 387.5 416 48.6
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 2.4e-105 386.7 419 48.2
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 4.0e-105 386.0 466 45.1
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 5.3e-105 385.6 413 47.5
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 2.6e-104 383.3 433 46.2
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 4.5e-104 382.5 413 46.5
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 4.5e-104 382.5 435 46.0
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 1.3e-103 380.9 417 46.0
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 1.7e-103 380.6 411 45.5
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 2.2e-103 380.2 413 45.8
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 2.9e-103 379.8 412 45.1
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 6.5e-103 378.6 419 45.6
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 8.4e-103 378.3 413 46.0
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 1.4e-102 377.5 413 45.8
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 1.9e-102 377.1 415 45.1
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 1.9e-102 377.1 418 47.8
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 5.5e-102 375.6 422 46.2
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 7.1e-102 375.2 426 47.9
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 1.6e-101 374.0 435 44.8
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 2.7e-101 373.2 427 45.0
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 7.9e-101 371.7 414 46.4
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 1.0e-100 371.3 409 46.9
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 1.3e-100 370.9 413 46.2
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 1.3e-100 370.9 380 50.3
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 1.8e-100 370.5 424 44.8
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 5.1e-100 369.0 444 44.4
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 5.1e-100 369.0 418 45.0
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 1.1e-99 367.9 445 44.0
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 1.5e-99 367.5 444 44.1
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 4.3e-99 365.9 430 44.2
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 9.7e-99 364.8 425 46.1
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 1.6e-98 364.0 418 45.9
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 2.2e-98 363.6 458 43.4
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 4.8e-98 362.5 439 45.1
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 6.3e-98 362.1 429 45.0
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 1.8e-97 360.5 424 44.6
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 3.1e-97 359.8 510 38.6
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 5.9e-96 355.5 413 44.3
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 1.0e-95 354.8 414 44.9
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 1.0e-95 354.8 413 44.3
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 1.3e-95 354.4 318 53.1
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 6.5e-95 352.1 412 43.4
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 1.1e-94 351.3 398 45.7
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 4.2e-94 349.4 314 52.9
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.6e-93 347.4 393 46.1
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 8.8e-92 341.7 462 40.9
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 2.5e-91 340.1 413 43.6
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 2.2e-90 337.0 367 46.9
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 1.1e-89 334.7 309 52.4
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 2.1e-85 320.5 311 51.8
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 7.0e-81 305.4 418 41.9
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 8.5e-79 298.5 386 43.5
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 5.5e-78 295.8 355 45.1
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 8.2e-74 282.0 454 39.6
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 2.6e-72 276.9 288 48.6
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.7e-67 259.2 441 37.6
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 2.2e-66 257.3 441 37.4
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.0e-63 248.4 442 37.1
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 3.8e-63 246.5 269 45.7
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.2e-62 243.4 438 36.5
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 4.7e-61 239.6 413 35.1
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 8.8e-60 235.3 422 36.7
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 4.4e-59 233.0 285 42.5
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.8e-58 230.3 438 34.7
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 1.2e-56 224.9 296 40.2
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 6.1e-53 212.6 447 29.5
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 1.4e-49 201.4 407 30.5
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.8e-49 201.1 238 45.0
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 1.3e-47 194.9 198 50.0
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 1.7e-47 194.5 413 29.8
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 1.7e-47 194.5 413 29.8
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.3e-47 194.1 414 35.0
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 3.3e-46 190.3 189 48.7
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 7.0e-41 172.6 220 39.5
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 3.9e-39 166.8 247 37.2
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 3.9e-39 166.8 311 38.6
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 5.6e-38 162.9 226 38.9
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 2.8e-37 160.6 150 50.0
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 3.1e-36 157.1 168 46.4
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 1.5e-35 154.8 232 37.5
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.5e-35 154.8 232 37.5
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 2.9e-34 150.6 283 33.2
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 3.7e-34 150.2 222 38.7
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 3.5e-32 143.7 297 31.0
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 1.3e-31 141.7 336 29.2
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 7.3e-30 136.0 355 28.5
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-29 135.2 135 51.9
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 1.2e-27 128.6 391 24.6
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.5e-27 128.3 151 45.7
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 4.1e-25 120.2 140 35.0
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 4.3e-22 110.2 116 50.0
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 5.6e-22 109.8 168 41.1
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 1.1e-17 95.5 105 44.8
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 1.6e-16 91.7 105 42.9
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 4.6e-16 90.1 83 48.2
Duzib133G0745 Durio zibethinus HOM05D002214 ORTHO05D007367 2.6e-11 74.3 98 39.8
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 2.7e-08 64.3 111 35.1
ATR0068G008 Amborella trichopoda HOM05D006479 ORTHO05D008310 1.1e-06 58.9 452 21.2
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.3e-06 57.4 78 38.5


User provided reference genes

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