Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021302 Vanilla planifolia HOM05D000921 ORTHO05D004153 1.3e-109 399.8 207 100.0
Psat6g058840 Pisum sativum HOM05D000921 ORTHO05D004153 1.9e-65 253.1 209 61.2
Manes.01G203800 Manihot esculenta HOM05D000921 ORTHO05D004153 4.2e-65 251.9 153 79.1
Potri.005G215400 Populus trichocarpa HOM05D000921 ORTHO05D004153 4.2e-65 251.9 237 56.5
CANSAT25G1208 Cannabis sativa HOM05D000921 ORTHO05D004153 5.5e-65 251.5 237 56.1
FvH4_2g22920 Fragaria vesca HOM05D000921 ORTHO05D004153 7.2e-65 251.1 155 78.7
FAN24G0847 Fragaria x ananassa HOM05D000921 ORTHO05D004153 7.2e-65 251.1 155 78.7
Sabra05G0164600 Salix brachista HOM05D000921 ORTHO05D004153 7.2e-65 251.1 237 56.1
MD11G1278500 Malus domestica HOM05D000921 ORTHO05D004153 9.4e-65 250.8 152 79.6
Prupe.8G234500 Prunus persica HOM05D000921 ORTHO05D004153 1.6e-64 250.0 155 78.7
FAN15G1223 Fragaria x ananassa HOM05D000921 ORTHO05D004153 2.1e-64 249.6 155 78.1
Ca_09726_v3 Cicer arietinum L. HOM05D000921 ORTHO05D004153 2.7e-64 249.2 237 55.3
Nn1g00513 Nelumbo nucifera HOM05D000921 ORTHO05D004153 2.7e-64 249.2 239 55.6
Atru.chr5.1523 Acer truncatum HOM05D000921 ORTHO05D004153 3.6e-64 248.8 154 77.9
Nn6g33594 Nelumbo nucifera HOM05D000921 ORTHO05D004153 4.7e-64 248.4 242 55.4
RcHm_v2.0_Chr6g0289881 Rosa chinensis HOM05D000921 ORTHO05D004153 4.7e-64 248.4 158 75.3
CiPaw.07G086700 Carya illinoinensis HOM05D000921 ORTHO05D004153 6.1e-64 248.1 154 76.6
Lj5g0027434 Lotus japonicus HOM05D000921 ORTHO05D004153 6.1e-64 248.1 237 54.4
TAR633G0413 Trochodendron aralioides HOM05D000921 ORTHO05D004153 6.1e-64 248.1 154 79.2
arahy.Tifrunner.gnm1.ann1.BY50EL Arachis hypogaea HOM05D000921 ORTHO05D004153 8.0e-64 247.7 166 74.7
QL12p042334 Quercus lobata HOM05D000921 ORTHO05D004153 8.0e-64 247.7 151 78.1
Actinidia19962 Actinidia chinensis HOM05D000921 ORTHO05D004153 1.0e-63 247.3 151 79.5
vmacro02613 Vaccinium macrocarpon HOM05D000921 ORTHO05D004153 1.4e-63 246.9 162 74.1
Cfa006203 Carpinus fangiana HOM05D000921 ORTHO05D004153 1.8e-63 246.5 240 54.6
Glyma.02G144200 Glycine max HOM05D000921 ORTHO05D004153 1.8e-63 246.5 151 78.1
Lj2C1164G7 Lonicera japonica HOM05D000921 ORTHO05D004153 1.8e-63 246.5 151 77.5
TPR.G34892 Trifolium pratense HOM05D000921 ORTHO05D004153 1.8e-63 246.5 237 55.3
PSO210G1924 Papaver somniferum HOM05D000921 ORTHO05D004153 4.0e-63 245.4 155 74.2
Potri.002G047700 Populus trichocarpa HOM05D000921 ORTHO05D004153 4.0e-63 245.4 237 54.9
Sabra02G0038900 Salix brachista HOM05D000921 ORTHO05D004153 4.0e-63 245.4 237 53.6
Actinidia09105 Actinidia chinensis HOM05D000921 ORTHO05D004153 5.2e-63 245.0 151 77.5
Haze_04641 Corylus avellana HOM05D000921 ORTHO05D004153 5.2e-63 245.0 240 54.2
Dinv22500 Davidia involucrata HOM05D000921 ORTHO05D004153 5.2e-63 245.0 154 76.0
MD03G1257800 Malus domestica HOM05D000921 ORTHO05D004153 5.2e-63 245.0 240 55.0
Dinv32883 Davidia involucrata HOM05D000921 ORTHO05D004153 8.8e-63 244.2 154 76.6
Rhsim13G0028700 Rhododendron simsii HOM05D000921 ORTHO05D004153 8.8e-63 244.2 154 76.6
CSS0032745 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 1.2e-62 243.8 154 76.0
Glyma.10G030000 Glycine max HOM05D000921 ORTHO05D004153 1.2e-62 243.8 151 76.8
Oeu035109.1 Olea europaea HOM05D000921 ORTHO05D004153 1.2e-62 243.8 177 67.2
Aa31LG1G9470 Aethionema arabicum HOM05D000921 ORTHO05D004153 2.0e-62 243.0 237 54.0
CSS0010203 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 2.0e-62 243.0 155 75.5
CSS0042369 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 2.0e-62 243.0 155 75.5
Medtr1g071260 Medicago truncatula HOM05D000921 ORTHO05D004153 2.0e-62 243.0 167 71.3
THA.LOC104825985 Tarenaya hassleriana HOM05D000921 ORTHO05D004153 2.0e-62 243.0 155 74.8
TWI12G1077 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 2.0e-62 243.0 152 74.3
Migut.D00355 Erythranthe guttata HOM05D000921 ORTHO05D004153 4.4e-62 241.9 155 73.5
FAN20G3205 Fragaria x ananassa HOM05D000921 ORTHO05D004153 4.4e-62 241.9 153 76.5
Lsat_1_v5_gn_5_185441 Lactuca sativa HOM05D000921 ORTHO05D004153 4.4e-62 241.9 158 72.8
Lalb_Chr06g0162771 Lupinus albus HOM05D000921 ORTHO05D004153 4.4e-62 241.9 237 54.4
Sopen09g027450 Solanum pennellii HOM05D000921 ORTHO05D004153 4.4e-62 241.9 154 74.0
Lalb_Chr01g0019981 Lupinus albus HOM05D000921 ORTHO05D004153 7.5e-62 241.1 245 53.1
Aqoxy5G00390 Aquilegia oxysepala HOM05D000921 ORTHO05D004153 9.7e-62 240.7 169 70.4
CAN.G1072.6 Capsicum annuum HOM05D000921 ORTHO05D004153 9.7e-62 240.7 150 76.0
Cc01_g18990 Coffea canephora HOM05D000921 ORTHO05D004153 1.3e-61 240.4 154 73.4
Gohir.D11G131000 Gossypium hirsutum HOM05D000921 ORTHO05D004153 1.3e-61 240.4 151 76.8
Gorai.007G140000 Gossypium raimondii HOM05D000921 ORTHO05D004153 1.3e-61 240.4 151 76.8
SalBow4G3326 Salvia bowleyana HOM05D000921 ORTHO05D004153 1.7e-61 240.0 151 76.2
Sc17g0001140 Simmondsia chinensis HOM05D000921 ORTHO05D004153 1.7e-61 240.0 153 75.2
ClCG09G007420 Citrullus lanatus HOM05D000921 ORTHO05D004153 2.2e-61 239.6 240 55.0
SGA_v2.0_scaffold1G00535 Striga asiatica HOM05D000921 ORTHO05D004153 2.8e-61 239.2 151 74.8
Thecc.01G271200 Theobroma cacao HOM05D000921 ORTHO05D004153 2.8e-61 239.2 151 76.2
GSVIVG01003123001 Vitis vinifera HOM05D000921 ORTHO05D004153 2.8e-61 239.2 166 72.9
Duzib133G0456 Durio zibethinus HOM05D000921 ORTHO05D004153 3.7e-61 238.8 151 76.2
Duzib138G1896 Durio zibethinus HOM05D000921 ORTHO05D004153 3.7e-61 238.8 237 54.0
Gohir.A11G125600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 3.7e-61 238.8 151 76.2
COL.COLO4_09186 Corchorus olitorius HOM05D000921 ORTHO05D004153 4.8e-61 238.4 237 53.6
Sed0015319 Sechium edule HOM05D000921 ORTHO05D004153 4.8e-61 238.4 155 74.8
Solyc09g065700.3 Solanum lycopersicum HOM05D000921 ORTHO05D004153 4.8e-61 238.4 154 72.7
PGR044G0864 Punica granatum HOM05D000921 ORTHO05D004153 6.3e-61 238.0 240 53.3
MELO3C015783.2 Cucumis melo HOM05D000921 ORTHO05D004153 8.2e-61 237.7 240 54.6
CsaV3_7G027700 Cucumis sativus L. HOM05D000921 ORTHO05D004153 8.2e-61 237.7 155 75.5
Gohir.D08G205600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 8.2e-61 237.7 154 74.0
Sc05g0001320 Simmondsia chinensis HOM05D000921 ORTHO05D004153 8.2e-61 237.7 150 77.3
Peaxi162Scf00259g00414 Petunia axillaris HOM05D000921 ORTHO05D004153 1.1e-60 237.3 240 51.7
Zm00001eb056940 Zea mays HOM05D000921 ORTHO05D004153 1.1e-60 237.3 240 52.1
Ciclev10018426m.g Citrus clementina HOM05D000921 ORTHO05D004153 1.8e-60 236.5 154 74.0
Gorai.004G217600 Gossypium raimondii HOM05D000921 ORTHO05D004153 2.4e-60 236.1 154 73.4
HanXRQChr06g0177821 Helianthus annuus HOM05D000921 ORTHO05D004153 2.4e-60 236.1 154 72.7
A10p01690 Brassica napus HOM05D000921 ORTHO05D004153 3.1e-60 235.7 152 73.0
C05p01680 Brassica napus HOM05D000921 ORTHO05D004153 3.1e-60 235.7 152 73.0
BolC5t28947H Brassica oleracea HOM05D000921 ORTHO05D004153 3.1e-60 235.7 152 73.0
BraA10t42445Z Brassica rapa HOM05D000921 ORTHO05D004153 3.1e-60 235.7 152 73.0
Phvul.007G175300 Phaseolus vulgaris HOM05D000921 ORTHO05D004153 3.1e-60 235.7 167 70.7
Lj1C56G6 Lonicera japonica HOM05D000921 ORTHO05D004153 4.1e-60 235.3 158 70.9
A09p68370 Brassica napus HOM05D000921 ORTHO05D004153 5.3e-60 235.0 152 73.7
C08p52940 Brassica napus HOM05D000921 ORTHO05D004153 5.3e-60 235.0 152 73.7
BolC8t52810H Brassica oleracea HOM05D000921 ORTHO05D004153 5.3e-60 235.0 152 73.7
Gohir.A08G187300 Gossypium hirsutum HOM05D000921 ORTHO05D004153 5.3e-60 235.0 170 68.8
AT1G03060 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 7.0e-60 234.6 237 52.7
BcaC01g06740 Brassica carinata HOM05D000921 ORTHO05D004153 7.0e-60 234.6 151 73.5
ECA248G3113 Erigeron canadensis HOM05D000921 ORTHO05D004153 7.0e-60 234.6 152 72.4
Hma1.2p1_0760F.1_g214090 Hydrangea macrophylla HOM05D000921 ORTHO05D004153 9.1e-60 234.2 158 70.9
BcaB03g15744 Brassica carinata HOM05D000921 ORTHO05D004153 1.2e-59 233.8 152 72.4
BcaC07g42269 Brassica carinata HOM05D000921 ORTHO05D004153 1.2e-59 233.8 161 69.6
C03p37700 Brassica napus HOM05D000921 ORTHO05D004153 1.2e-59 233.8 156 71.2
BolC3t16059H Brassica oleracea HOM05D000921 ORTHO05D004153 1.2e-59 233.8 156 71.2
Carub.0001s0220 Capsella rubella HOM05D000921 ORTHO05D004153 1.2e-59 233.8 237 51.9
Sp1g02060 Schrenkiella parvula HOM05D000921 ORTHO05D004153 1.2e-59 233.8 152 72.4
A03p30920 Brassica napus HOM05D000921 ORTHO05D004153 1.6e-59 233.4 151 72.8
CARHR002410 Cardamine hirsuta HOM05D000921 ORTHO05D004153 1.6e-59 233.4 152 72.4
EL10Ac5g10491 Beta vulgaris HOM05D000921 ORTHO05D004153 2.0e-59 233.0 150 74.7
CARHR250960 Cardamine hirsuta HOM05D000921 ORTHO05D004153 2.0e-59 233.0 158 71.5
AL1G12520 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 2.7e-59 232.6 237 51.9
AT4G02660 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 2.7e-59 232.6 158 70.3
Oeu002265.1 Olea europaea HOM05D000921 ORTHO05D004153 2.7e-59 232.6 155 72.3
ATR0665G073 Amborella trichopoda HOM05D000921 ORTHO05D004153 3.5e-59 232.3 155 73.5
Thhalv10006519m.g Eutrema salsugineum HOM05D000921 ORTHO05D004153 3.5e-59 232.3 237 51.9
Ah.11g050210 Amaranthus hybridus HOM05D000921 ORTHO05D004153 4.5e-59 231.9 150 74.7
arahy.Tifrunner.gnm1.ann1.BT7PUB Arachis hypogaea HOM05D000921 ORTHO05D004153 4.5e-59 231.9 150 75.3
arahy.Tifrunner.gnm1.ann1.EGZY1N Arachis hypogaea HOM05D000921 ORTHO05D004153 4.5e-59 231.9 150 75.3
arahy.Tifrunner.gnm1.ann1.IAH9UB Arachis hypogaea HOM05D000921 ORTHO05D004153 4.5e-59 231.9 150 75.3
Hund09551 Selenicereus undatus HOM05D000921 ORTHO05D004153 4.5e-59 231.9 151 74.2
TWI18G0154 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 4.5e-59 231.9 155 71.0
AL6G50380 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 5.9e-59 231.5 158 70.3
BraA03t12271Z Brassica rapa HOM05D000921 ORTHO05D004153 1.0e-58 230.7 151 72.2
Gohir.D08G055600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 1.3e-58 230.3 155 72.3
HanXRQChr04g0113931 Helianthus annuus HOM05D000921 ORTHO05D004153 1.3e-58 230.3 172 64.5
unitig_61.g26265 Utricularia gibba HOM05D000921 ORTHO05D004153 2.2e-58 229.6 150 72.0
BraA09t42173Z Brassica rapa HOM05D000921 ORTHO05D004153 2.9e-58 229.2 152 71.7
ECA236G3737 Erigeron canadensis HOM05D000921 ORTHO05D004153 2.9e-58 229.2 180 62.2
Gohir.A08G045265 Gossypium hirsutum HOM05D000921 ORTHO05D004153 2.9e-58 229.2 155 71.6
Gorai.004G056400 Gossypium raimondii HOM05D000921 ORTHO05D004153 2.9e-58 229.2 155 71.6
Lsat_1_v5_gn_8_93941 Lactuca sativa HOM05D000921 ORTHO05D004153 3.8e-58 228.8 171 68.4
CDE04G0357 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 6.5e-58 228.0 153 70.6
Eucgr.K03323 Eucalyptus grandis HOM05D000921 ORTHO05D004153 6.5e-58 228.0 240 50.8
AUR62011970 Chenopodium quinoa HOM05D000921 ORTHO05D004153 2.5e-57 226.1 151 73.5
AUR62032282 Chenopodium quinoa HOM05D000921 ORTHO05D004153 5.5e-57 224.9 151 72.8
HanXRQChr01g0005671 Helianthus annuus HOM05D000921 ORTHO05D004153 5.5e-57 224.9 152 68.4
Hund02865 Selenicereus undatus HOM05D000921 ORTHO05D004153 5.5e-57 224.9 148 73.0
Sp6g02580 Schrenkiella parvula HOM05D000921 ORTHO05D004153 7.2e-57 224.6 158 67.7
Carub.0006s3446 Capsella rubella HOM05D000921 ORTHO05D004153 1.2e-56 223.8 161 67.1
MSTRG.21525 Avicennia marina HOM05D000921 ORTHO05D004153 1.8e-55 219.9 151 70.2
SEGI_18450 Sequoiadendron giganteum HOM05D000921 ORTHO05D004153 1.8e-55 219.9 166 67.5
PSO461G0055 Papaver somniferum HOM05D000921 ORTHO05D004153 2.7e-51 206.1 159 66.7
Pp3c5_2890 Physcomitrium patens HOM05D000921 ORTHO05D004153 3.6e-48 195.7 150 61.3
Pp3c5_2897 Physcomitrium patens HOM05D000921 ORTHO05D004153 3.6e-48 195.7 150 61.3
SMO236G0048 Selaginella moellendorffii HOM05D000921 ORTHO05D004153 1.4e-47 193.7 148 64.2
SMO370G0001 Selaginella moellendorffii HOM05D000921 ORTHO05D004153 1.4e-47 193.7 148 64.2
CDE10G0462 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 4.0e-47 192.2 143 60.8
Pp3c6_26100 Physcomitrium patens HOM05D000921 ORTHO05D004153 8.9e-47 191.0 151 60.3
Pp3c16_11700 Physcomitrium patens HOM05D000921 ORTHO05D004153 3.1e-44 182.6 151 56.3
Pp3c16_11705 Physcomitrium patens HOM05D000921 ORTHO05D004153 3.1e-44 182.6 151 56.3
AagrBONN_evm.TU.Sc2ySwM_117.1900 Anthoceros agrestis HOM05D000921 ORTHO05D004153 5.9e-43 178.3 151 58.3
Mapoly0082s0083 Marchantia polymorpha HOM05D000921 ORTHO05D004153 5.9e-43 178.3 150 56.7
Pp3c6_5700 Physcomitrium patens HOM05D000921 ORTHO05D004153 1.0e-39 167.5 163 53.4
Pp3c6_5706 Physcomitrium patens HOM05D000921 ORTHO05D004153 1.0e-39 167.5 163 53.4
SHI10018 Sapria himalayana HOM05D000921 ORTHO05D004153 2.6e-30 136.3 106 65.1
Hund09555 Selenicereus undatus HOM05D000921 ORTHO05D004153 9.8e-30 134.4 135 54.8
AUR62011967 Chenopodium quinoa HOM05D000921 ORTHO05D004153 4.1e-28 129.0 148 47.3
AUR62032279 Chenopodium quinoa HOM05D000921 ORTHO05D004153 3.5e-27 125.9 148 46.6
CAN.G1355.5 Capsicum annuum HOM05D000921 ORTHO05D004153 3.9e-26 122.5 166 44.6
Psat2g055000 Pisum sativum HOM05D002140 ORTHO05D006885 3.5e-19 99.4 74 64.9
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 2.3e-18 96.7 152 37.5
Cpa.g.sc52.121 Carica papaya HOM05D000921 ORTHO05D004153 2.4e-12 76.6 51 68.6
Lsat_1_v5_gn_0_33020 Lactuca sativa HOM05D000557 ORTHO05D025256 1.6e-08 63.9 73 45.2


User provided reference genes

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