Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 0.0e+00 1184.9 618 100.0
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 1.1e-140 504.6 601 48.6
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.3e-135 486.9 601 45.9
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 2.9e-130 469.9 593 44.7
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 1.4e-127 461.1 610 43.8
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 1.4e-124 451.1 600 41.8
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 1.4e-124 451.1 563 44.4
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 1.3e-122 444.5 607 42.0
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 2.3e-122 443.7 613 41.3
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 5.0e-122 442.6 601 41.6
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 1.5e-121 441.0 603 41.1
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 1.9e-121 440.7 591 42.8
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 4.3e-121 439.5 603 41.1
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 5.6e-121 439.1 594 41.2
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 2.8e-120 436.8 606 42.4
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 3.6e-120 436.4 597 41.2
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.2e-118 431.4 591 41.5
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 1.2e-118 431.4 592 42.2
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 1.5e-118 431.0 610 40.2
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 3.4e-118 429.9 602 41.2
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 7.5e-118 428.7 598 42.5
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 9.8e-118 428.3 615 40.7
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 1.3e-117 427.9 596 40.3
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 1.3e-117 427.9 593 40.3
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 6.4e-117 425.6 596 41.6
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 1.9e-116 424.1 658 38.6
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 1.2e-115 421.4 602 40.4
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 2.1e-115 420.6 593 42.2
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 7.8e-115 418.7 604 40.2
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 1.0e-114 418.3 623 40.1
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.1e-113 414.8 632 38.9
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.5e-113 414.5 632 39.1
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 2.5e-113 413.7 647 39.1
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 1.6e-112 411.0 596 40.1
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 2.8e-112 410.2 632 38.6
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 1.2e-110 404.8 612 39.5
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 2.0e-110 404.1 581 39.4
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 2.6e-110 403.7 593 39.5
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 2.9e-109 400.2 609 38.9
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 4.9e-109 399.4 596 40.6
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 4.1e-108 396.4 593 40.6
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 9.2e-108 395.2 572 40.6
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 2.7e-107 393.7 534 40.8
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 3.9e-106 389.8 656 37.7
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 6.6e-106 389.0 537 41.2
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 1.9e-105 387.5 599 38.1
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 5.6e-105 386.0 592 38.3
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 1.2e-104 384.8 594 38.4
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.6e-104 383.3 595 38.3
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 3.6e-104 383.3 599 39.1
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 3.6e-104 383.3 596 38.3
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.8e-103 380.9 608 39.3
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 1.3e-101 374.8 661 36.3
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 1.3e-101 374.8 599 37.7
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 6.4e-101 372.5 603 38.5
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.1e-100 371.7 632 36.9
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.1e-100 371.7 607 37.4
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.1e-100 371.7 608 39.0
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 2.4e-100 370.5 601 37.8
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 5.6e-97 359.4 579 39.2
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 1.2e-96 358.2 656 34.8
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 6.2e-96 355.9 487 42.1
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 5.3e-95 352.8 608 37.3
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 6.9e-95 352.4 608 35.9
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 1.5e-94 351.3 600 37.3
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 2.6e-94 350.5 567 37.4
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 3.4e-94 350.1 617 37.3
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 3.4e-94 350.1 605 36.5
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 1.7e-93 347.8 601 36.8
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 2.7e-91 340.5 618 35.3
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 3.5e-91 340.1 598 37.0
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 7.8e-91 339.0 608 36.3
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 7.8e-91 339.0 477 40.7
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 1.0e-90 338.6 453 43.0
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.9e-89 334.3 614 36.0
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 1.5e-86 324.7 618 34.3
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 1.5e-86 324.7 527 38.5
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 2.6e-86 323.9 612 34.6
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 1.3e-85 321.6 620 34.5
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 2.3e-82 310.8 489 38.7
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 1.9e-81 307.8 540 37.8
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 5.6e-81 306.2 609 34.3
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.8e-80 303.9 354 45.5
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 1.4e-79 301.6 618 32.8
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.8e-79 301.2 544 35.5
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.3e-77 295.0 354 45.5
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 6.4e-77 292.7 354 44.4
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 1.2e-75 288.5 643 33.0
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 6.2e-72 276.2 650 31.2
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 9.0e-71 272.3 634 32.0
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 1.5e-70 271.6 572 32.3
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 3.8e-69 266.9 414 37.9
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 1.9e-68 264.6 519 34.1
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.3e-66 258.5 434 36.6
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.3e-66 257.7 349 41.3
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 1.3e-61 241.9 317 41.3
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 5.5e-60 236.5 407 36.6
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 7.4e-57 226.1 597 31.0
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 4.8e-56 223.4 268 44.0
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 3.9e-50 203.8 570 28.9
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 1.5e-44 185.3 529 30.6
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 6.7e-42 176.4 296 36.1
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.3e-40 172.2 405 29.9
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 3.7e-40 170.6 572 26.2
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 1.4e-39 168.7 286 36.7
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 5.0e-37 160.2 617 25.9
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.7e-32 145.2 571 27.0
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 2.2e-32 144.8 227 40.1
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 3.7e-32 144.1 448 27.7
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 6.1e-27 126.7 150 44.0
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.2e-20 104.0 87 57.5
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 4.9e-16 90.5 149 36.9
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 1.0e-13 82.8 152 35.5
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 1.5e-12 79.0 98 44.9
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 4.3e-12 77.4 242 27.3
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 4.0e-10 70.9 78 46.2
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 1.1e-07 62.8 123 38.2


User provided reference genes

Program Settings