Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 7.5e-203 710.3 359 100.0
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 8.7e-66 255.0 225 54.2
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 8.1e-64 248.4 211 54.0
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.2e-62 244.6 210 49.0
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 9.9e-62 241.5 212 50.0
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 1.3e-61 241.1 214 52.8
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 2.2e-61 240.4 210 50.5
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.9e-60 237.3 208 49.5
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 3.2e-60 236.5 209 51.2
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 7.1e-60 235.3 211 50.2
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 7.1e-60 235.3 217 51.2
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 1.6e-59 234.2 211 49.3
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 2.7e-59 233.4 212 50.5
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 1.7e-58 230.7 230 48.7
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 1.7e-58 230.7 223 48.0
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 3.0e-58 229.9 215 51.2
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 3.9e-58 229.6 217 49.3
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 5.1e-58 229.2 210 48.1
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 5.1e-58 229.2 209 48.8
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 8.7e-58 228.4 214 50.9
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 1.5e-57 227.6 214 51.4
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 2.5e-57 226.9 212 50.5
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 2.5e-57 226.9 211 48.3
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 3.3e-57 226.5 211 47.9
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 3.3e-57 226.5 211 48.8
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 5.6e-57 225.7 214 50.9
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 5.6e-57 225.7 211 49.3
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 7.3e-57 225.3 213 51.2
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.6e-56 224.2 212 50.5
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.6e-56 224.2 210 50.0
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 1.6e-56 224.2 214 48.6
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 2.1e-56 223.8 219 48.9
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 2.8e-56 223.4 218 48.6
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.8e-56 223.4 217 47.9
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 3.6e-56 223.0 211 48.8
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 1.1e-55 221.5 209 49.3
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.4e-55 221.1 210 48.6
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 1.8e-55 220.7 222 46.4
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 4.0e-55 219.5 211 48.3
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 4.5e-54 216.1 223 43.0
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 4.5e-54 216.1 229 47.6
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 5.8e-54 215.7 212 46.2
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 7.6e-54 215.3 212 48.6
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.7e-53 214.2 207 47.8
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 1.7e-53 214.2 211 47.9
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 2.2e-53 213.8 221 47.1
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 2.2e-53 213.8 217 44.7
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 2.9e-53 213.4 214 46.3
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 3.8e-53 213.0 212 46.2
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 3.8e-53 213.0 212 46.2
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 3.8e-53 213.0 216 44.4
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 4.9e-53 212.6 218 45.9
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 6.4e-53 212.2 211 47.9
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 6.4e-53 212.2 215 43.7
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 1.1e-52 211.5 210 46.2
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 1.1e-52 211.5 212 46.2
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 1.4e-52 211.1 212 48.1
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 1.9e-52 210.7 214 46.3
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 4.2e-52 209.5 207 44.0
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 7.1e-52 208.8 217 43.8
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 1.2e-51 208.0 212 46.7
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 1.2e-51 208.0 218 46.8
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 2.1e-51 207.2 213 43.7
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 2.7e-51 206.8 220 43.6
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 3.5e-51 206.5 195 48.7
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 4.6e-51 206.1 220 44.5
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 6.0e-51 205.7 203 46.3
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 7.9e-51 205.3 221 43.0
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 1.0e-50 204.9 213 46.0
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 1.3e-50 204.5 220 44.1
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 1.3e-50 204.5 213 44.6
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.8e-50 204.1 216 45.4
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 3.9e-50 203.0 217 45.2
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 5.1e-50 202.6 195 46.7
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 6.7e-50 202.2 212 46.2
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 1.1e-49 201.4 213 47.4
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 1.5e-49 201.1 219 46.6
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 1.5e-49 201.1 215 47.0
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 1.5e-49 201.1 222 44.1
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 1.5e-49 201.1 216 44.9
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 1.5e-49 201.1 209 44.0
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.5e-49 201.1 209 46.9
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 1.9e-49 200.7 231 42.4
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 5.6e-49 199.1 187 48.7
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.3e-48 198.0 203 45.8
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 3.7e-48 196.4 209 45.9
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 4.8e-48 196.1 217 47.0
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 1.1e-47 194.9 213 44.6
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 1.4e-47 194.5 201 47.3
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 4.0e-47 193.0 213 45.1
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 6.9e-47 192.2 213 42.7
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 9.0e-47 191.8 217 43.3
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 9.0e-47 191.8 217 43.8
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 1.2e-46 191.4 239 43.5
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 2.0e-46 190.7 207 44.9
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 2.0e-46 190.7 213 42.3
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 2.6e-46 190.3 238 42.4
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 7.6e-46 188.7 238 43.3
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 2.2e-45 187.2 210 44.8
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 8.4e-45 185.3 214 41.1
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 8.4e-45 185.3 219 45.2
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 8.4e-45 185.3 197 45.2
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 1.9e-44 184.1 210 44.3
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 4.2e-44 183.0 209 43.5
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 4.2e-44 183.0 179 46.4
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 5.5e-44 182.6 209 43.5
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 9.3e-44 181.8 164 51.8
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 1.2e-43 181.4 209 41.1
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 1.2e-43 181.4 209 41.1
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 1.2e-43 181.4 209 41.1
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 2.7e-43 180.3 209 41.6
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 4.6e-43 179.5 259 38.6
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 6.0e-43 179.1 230 41.7
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 7.9e-43 178.7 219 41.1
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 1.3e-42 177.9 182 47.3
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 1.8e-42 177.6 193 45.1
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 1.8e-42 177.6 203 40.9
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 6.7e-42 175.6 228 40.8
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 6.7e-42 175.6 210 41.4
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 1.1e-41 174.9 211 41.2
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.5e-41 173.7 216 40.7
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 1.3e-40 171.4 211 42.2
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 1.3e-40 171.4 211 42.2
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.1e-40 170.6 196 42.3
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 6.2e-40 169.1 202 42.1
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 6.2e-40 169.1 168 51.2
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 8.2e-40 168.7 202 42.1
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 2.4e-39 167.2 180 47.8
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 2.4e-39 167.2 208 40.9
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 5.3e-39 166.0 211 41.2
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 5.3e-39 166.0 211 41.2
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 1.2e-38 164.9 195 42.6
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 1.5e-38 164.5 238 35.7
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 1.5e-38 164.5 162 45.1
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 1.0e-37 161.8 203 40.9
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 1.3e-37 161.4 234 37.2
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 1.3e-37 161.4 254 36.6
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 2.9e-37 160.2 287 33.1
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 3.8e-37 159.8 239 36.0
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.4e-36 157.9 165 43.0
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 3.2e-36 156.8 223 37.7
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 7.1e-36 155.6 211 39.8
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 1.2e-35 154.8 265 32.8
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 7.9e-35 152.1 196 40.3
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 7.9e-35 152.1 159 44.0
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 1.0e-34 151.8 165 44.2
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 1.5e-33 147.9 159 42.1
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 4.3e-33 146.4 207 36.2
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 5.7e-33 146.0 210 37.1
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 7.4e-33 145.6 230 34.3
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 4.1e-31 139.8 205 37.1
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 2.2e-29 134.0 109 52.3
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 3.8e-29 133.3 220 33.6
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 3.8e-29 133.3 301 28.6
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 1.4e-28 131.3 199 37.7
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 3.6e-27 126.7 217 32.7
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 8.8e-26 122.1 175 37.7
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 4.3e-25 119.8 103 53.4
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 1.7e-24 117.9 226 32.3
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 2.8e-24 117.1 167 39.5
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 1.5e-22 111.3 198 32.8
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 1.5e-22 111.3 140 40.7
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.5e-22 111.3 193 36.3
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 1.0e-21 108.6 145 38.6
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 2.2e-21 107.5 87 52.9
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 9.4e-20 102.1 66 57.6
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 1.7e-16 91.3 84 52.4
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 6.3e-16 89.4 69 50.7
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 7.0e-15 85.9 74 48.6
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 6.5e-13 79.3 113 35.4
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 4.2e-12 76.6 144 33.3
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 7.2e-12 75.9 218 25.7
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 2.1e-11 74.3 209 25.8
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 3.6e-11 73.6 47 66.0
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 1.0e-10 72.0 60 45.0
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 3.0e-10 70.5 209 23.9
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 1.1e-09 68.6 88 42.0
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 2.6e-09 67.4 47 61.7
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 5.7e-09 66.2 96 38.5
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 8.2e-08 62.4 99 33.3
Lj1A1127T48 Lonicera japonica HOM05D003612 ORTHO05D004323 9.1e-07 58.9 43 53.5


User provided reference genes

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