Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018064 Vanilla planifolia HOM05D007197 ORTHO05D009064 2.5e-139 498.8 256 100.0
HPP92_017953 Vanilla planifolia HOM05D007197 ORTHO05D009064 2.1e-53 213.4 245 55.5
Hma1.2p1_0846F.1_g227730 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 9.3e-38 161.4 198 46.0
QL01p033595 Quercus lobata HOM05D007197 ORTHO05D009064 1.6e-37 160.6 198 44.9
TAR636G0394 Trochodendron aralioides HOM05D007197 ORTHO05D009064 1.6e-37 160.6 198 46.5
Dinv32855 Davidia involucrata HOM05D007197 ORTHO05D009064 2.1e-37 160.2 198 44.9
FAN11G2804 Fragaria x ananassa HOM05D007197 ORTHO05D009064 7.9e-37 158.3 198 45.5
RcHm_v2.0_Chr5g0062661 Rosa chinensis HOM05D007197 ORTHO05D009064 1.0e-36 157.9 198 44.4
Manes.11G135500 Manihot esculenta HOM05D007197 ORTHO05D009064 1.3e-36 157.5 202 43.1
CsaV3_6G022120 Cucumis sativus L. HOM05D007197 ORTHO05D009064 2.3e-36 156.8 198 44.9
Atru.chr7.1106 Acer truncatum HOM05D007197 ORTHO05D009064 1.1e-35 154.5 198 43.9
Haze_24013 Corylus avellana HOM05D007197 ORTHO05D009064 1.9e-35 153.7 200 41.5
Haze_24019 Corylus avellana HOM05D007197 ORTHO05D009064 1.9e-35 153.7 200 41.5
Cfa011437 Carpinus fangiana HOM05D007197 ORTHO05D009064 2.5e-35 153.3 198 42.4
GSVIVG01025047001 Vitis vinifera HOM05D007197 ORTHO05D009064 4.3e-35 152.5 198 42.4
TWI79G0955 Tripterygium wilfordii HOM05D007197 ORTHO05D009064 5.6e-35 152.1 198 43.9
ClCG02G020670 Citrullus lanatus HOM05D007197 ORTHO05D009064 7.4e-35 151.8 165 48.5
MD11G1115100 Malus domestica HOM05D007197 ORTHO05D009064 7.4e-35 151.8 199 42.7
Gohir.A05G098300 Gossypium hirsutum HOM05D007197 ORTHO05D009064 9.6e-35 151.4 198 41.4
Prupe.6G066800 Prunus persica HOM05D007197 ORTHO05D009064 9.6e-35 151.4 198 43.9
Hma1.2p1_0846F.1_g227720 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 1.3e-34 151.0 160 50.6
Prupe.6G086100 Prunus persica HOM05D007197 ORTHO05D009064 1.3e-34 151.0 198 43.9
Phvul.011G067900 Phaseolus vulgaris HOM05D007197 ORTHO05D009064 2.8e-34 149.8 198 43.9
FAN21G2562 Fragaria x ananassa HOM05D007197 ORTHO05D009064 3.7e-34 149.4 219 40.2
Nn2g10506 Nelumbo nucifera HOM05D007197 ORTHO05D009064 3.7e-34 149.4 198 44.4
ATR0033G040 Amborella trichopoda HOM05D007197 ORTHO05D009064 4.8e-34 149.1 201 44.3
Eucgr.J02088 Eucalyptus grandis HOM05D007197 ORTHO05D009064 4.8e-34 149.1 198 40.9
AL1G17970 Arabidopsis lyrata HOM05D007197 ORTHO05D009064 6.2e-34 148.7 198 44.4
Thecc.09G328900 Theobroma cacao HOM05D007197 ORTHO05D009064 8.1e-34 148.3 201 43.8
Lalb_Chr19g0137651 Lupinus albus HOM05D007197 ORTHO05D009064 1.4e-33 147.5 198 44.4
Sed0002926 Sechium edule HOM05D007197 ORTHO05D009064 1.4e-33 147.5 197 44.2
arahy.Tifrunner.gnm1.ann1.EBM8RS Arachis hypogaea HOM05D007197 ORTHO05D009064 1.8e-33 147.1 199 44.7
Glyma.11G143900 Glycine max HOM05D007197 ORTHO05D009064 2.4e-33 146.7 210 40.0
CAN.G764.13 Capsicum annuum HOM05D007197 ORTHO05D009064 3.1e-33 146.4 199 44.2
FvH4_3g34810 Fragaria vesca HOM05D007197 ORTHO05D009064 3.1e-33 146.4 165 47.3
Gorai.009G102000 Gossypium raimondii HOM05D007197 ORTHO05D009064 3.1e-33 146.4 199 40.2
AT1G07745 Arabidopsis thaliana HOM05D007197 ORTHO05D009064 4.0e-33 146.0 198 43.9
MELO3C013672.2 Cucumis melo HOM05D007197 ORTHO05D009064 4.0e-33 146.0 201 45.3
CiPaw.13G100300 Carya illinoinensis HOM05D007197 ORTHO05D009064 5.3e-33 145.6 199 43.7
Sopen11g030850 Solanum pennellii HOM05D007197 ORTHO05D009064 5.3e-33 145.6 198 44.4
VMungo1127G0131 Vigna mungo HOM05D007197 ORTHO05D009064 5.3e-33 145.6 198 42.4
Aqoxy4G03051 Aquilegia oxysepala HOM05D007197 ORTHO05D009064 6.9e-33 145.2 198 43.9
arahy.Tifrunner.gnm1.ann1.RPJA1V Arachis hypogaea HOM05D007197 ORTHO05D009064 6.9e-33 145.2 199 44.2
BcaB03g13374 Brassica carinata HOM05D007197 ORTHO05D009064 6.9e-33 145.2 200 44.0
Os09g0104200 Oryza sativa ssp. japonica HOM05D007197 ORTHO05D009064 6.9e-33 145.2 181 44.8
Lj3g0013433 Lotus japonicus HOM05D007197 ORTHO05D009064 9.0e-33 144.8 199 43.2
Duzib168G0795 Durio zibethinus HOM05D007197 ORTHO05D009064 1.5e-32 144.1 199 40.7
PSO206G0023 Papaver somniferum HOM05D007197 ORTHO05D009064 2.0e-32 143.7 198 42.4
Nn2g16043 Nelumbo nucifera HOM05D007197 ORTHO05D009064 2.6e-32 143.3 192 43.8
Medtr4g062540 Medicago truncatula HOM05D007197 ORTHO05D009064 3.4e-32 142.9 200 42.5
Sp1g06430 Schrenkiella parvula HOM05D007197 ORTHO05D009064 4.5e-32 142.5 200 43.5
DCAR_018914 Daucus carota HOM05D007197 ORTHO05D009064 5.8e-32 142.1 200 45.5
Peaxi162Scf00406g00019 Petunia axillaris HOM05D007197 ORTHO05D009064 5.8e-32 142.1 220 42.3
Solyc11g073220.3 Solanum lycopersicum HOM05D007197 ORTHO05D009064 5.8e-32 142.1 198 43.4
MBI14_g30584_MAGBIO Magnolia biondii HOM05D007197 ORTHO05D009064 7.6e-32 141.7 173 46.2
Ca_19199_v3 Cicer arietinum L. HOM05D007197 ORTHO05D009064 1.3e-31 141.0 200 42.5
COL.COLO4_15236 Corchorus olitorius HOM05D007197 ORTHO05D009064 1.3e-31 141.0 207 40.1
TPR.G1052 Trifolium pratense HOM05D007197 ORTHO05D009064 1.7e-31 140.6 199 41.2
Carub.0001s0710 Capsella rubella HOM05D007197 ORTHO05D009064 2.2e-31 140.2 201 41.8
Thhalv10008243m.g Eutrema salsugineum HOM05D007197 ORTHO05D009064 2.9e-31 139.8 209 41.6
THA.LOC104800640 Tarenaya hassleriana HOM05D007197 ORTHO05D009064 4.9e-31 139.0 198 44.4
SGA_v2.0_scaffold257G45723 Striga asiatica HOM05D007197 ORTHO05D009064 6.4e-31 138.7 198 43.4
PSO339G6612 Papaver somniferum HOM05D007197 ORTHO05D009064 1.4e-30 137.5 198 41.4
C08p03340 Brassica napus HOM05D007197 ORTHO05D009064 1.9e-30 137.1 200 42.0
BolC8t47130H Brassica oleracea HOM05D007197 ORTHO05D009064 1.9e-30 137.1 200 42.0
CARHR007550 Cardamine hirsuta HOM05D007197 ORTHO05D009064 1.9e-30 137.1 167 46.7
Nitab4.5_0000610g0220 Nicotiana tabacum HOM05D007197 ORTHO05D009064 2.5e-30 136.7 198 42.4
Actinidia03776 Actinidia chinensis HOM05D007197 ORTHO05D009064 4.2e-30 136.0 198 40.9
A08p35470 Brassica napus HOM05D007197 ORTHO05D009064 5.5e-30 135.6 200 42.5
BraA08t35453Z Brassica rapa HOM05D007197 ORTHO05D009064 5.5e-30 135.6 200 42.5
Oeu017383.1 Olea europaea HOM05D007197 ORTHO05D009064 5.5e-30 135.6 198 40.4
Migut.N02658 Erythranthe guttata HOM05D007197 ORTHO05D009064 7.1e-30 135.2 198 40.4
Lsat_1_v5_gn_5_166580 Lactuca sativa HOM05D001223 ORTHO05D001058 9.3e-30 134.8 199 41.7
Zm00001eb329200 Zea mays HOM05D007197 ORTHO05D009064 1.2e-29 134.4 200 40.0
Gohir.D05G098400 Gossypium hirsutum HOM05D007197 ORTHO05D009064 1.6e-29 134.0 163 42.9
Cc01_g12210 Coffea canephora HOM05D007197 ORTHO05D009064 4.6e-29 132.5 198 37.9
Nn2g16045 Nelumbo nucifera HOM05D007197 ORTHO05D009064 4.6e-29 132.5 164 44.5
HanXRQChr11g0340311 Helianthus annuus HOM05D007197 ORTHO05D009064 2.3e-28 130.2 200 40.0
Hund18943 Selenicereus undatus HOM05D007197 ORTHO05D009064 6.7e-28 128.6 197 38.1
SHI05980 Sapria himalayana HOM05D000723 ORTHO05D001626 1.1e-27 127.9 199 38.7
Rhsim01G0224100 Rhododendron simsii HOM05D007197 ORTHO05D009064 1.9e-27 127.1 198 39.4
Hma1.2p1_0056F.1_g031656 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 2.5e-27 126.7 185 40.5
Nitab4.5_0003179g0070 Nicotiana tabacum HOM05D007197 ORTHO05D009064 2.5e-27 126.7 229 36.7
AUR62041290 Chenopodium quinoa HOM05D007197 ORTHO05D009064 9.6e-27 124.8 197 38.1
ECA248G2344 Erigeron canadensis HOM05D007197 ORTHO05D009064 3.7e-26 122.9 199 39.7
AUR62034127 Chenopodium quinoa HOM05D007197 ORTHO05D009064 8.2e-26 121.7 197 38.6
EL10Ac7g15954 Beta vulgaris HOM05D007197 ORTHO05D009064 1.4e-25 120.9 209 36.8
Sc12g0001730 Simmondsia chinensis HOM05D007197 ORTHO05D009064 1.5e-24 117.5 173 38.2
CSS0011816 Camellia sinensis var. sinensis HOM05D007197 ORTHO05D009064 1.2e-21 107.8 198 35.9
Mapoly0014s0028 Marchantia polymorpha HOM05D007197 ORTHO05D009064 6.7e-20 102.1 231 31.2
AagrBONN_evm.TU.Sc2ySwM_228.390 Anthoceros agrestis HOM05D007197 ORTHO05D009064 1.3e-18 97.8 174 35.1
Pp3c23_10930 Physcomitrium patens HOM05D007197 ORTHO05D009064 3.1e-17 93.2 178 36.5
SMO358G0138 Selaginella moellendorffii HOM05D007197 ORTHO05D009064 4.1e-17 92.8 193 33.7
SMO142G0018 Selaginella moellendorffii HOM05D007197 ORTHO05D009064 6.9e-17 92.0 142 37.3
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 6.5e-15 85.5 208 33.2
unitig_0.g1024 Utricularia gibba HOM05D007197 ORTHO05D009064 6.5e-15 85.5 97 49.5
Psat7g220240 Pisum sativum HOM05D007197 ORTHO05D009064 1.4e-14 84.3 89 52.8
Cpa.g.sc252.16 Carica papaya HOM05D007197 ORTHO05D009064 1.9e-14 84.0 97 46.4
MCO16G347 Micromonas commoda HOM05D007197 ORTHO05D009064 6.9e-09 65.5 159 29.6
CsaV3_6G021820 Cucumis sativus L. HOM05D007288 ORTHO05D009200 2.5e-06 57.0 190 28.4
HPP92_001033 Vanilla planifolia HOM05D007288 ORTHO05D009200 3.2e-06 56.6 134 30.6
QL01p035799 Quercus lobata HOM05D007288 ORTHO05D009200 4.2e-06 56.2 136 33.1
ClCG02G020790 Citrullus lanatus HOM05D007288 ORTHO05D009200 7.2e-06 55.5 190 28.4
vmacro14499 Vaccinium macrocarpon HOM05D007197 ORTHO05D009064 9.4e-06 55.1 113 32.7


User provided reference genes

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