Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017435 Vanilla planifolia HOM05D000213 ORTHO05D432488 3.1e-44 181.4 91 100.0
HPP92_017398 Vanilla planifolia HOM05D000213 ORTHO05D000985 6.7e-23 110.5 53 98.1
MBI16_g09342_MAGBIO Magnolia biondii HOM05D000213 ORTHO05D000985 3.3e-14 81.6 58 69.0
HPP92_010316 Vanilla planifolia HOM05D000213 ORTHO05D000985 5.7e-14 80.9 56 71.4
MSTRG.11805 Avicennia marina HOM05D000213 ORTHO05D000985 1.4e-12 76.3 71 59.2
MD08G1127200 Malus domestica HOM05D000213 ORTHO05D000985 5.3e-12 74.3 57 64.9
TAR626G0788 Trochodendron aralioides HOM05D000213 ORTHO05D000985 1.5e-11 72.8 66 56.1
Cfa013475 Carpinus fangiana HOM05D000213 ORTHO05D000985 2.6e-11 72.0 56 62.5
Haze_22053 Corylus avellana HOM05D000213 ORTHO05D000985 2.6e-11 72.0 56 62.5
FvH4_2g36730 Fragaria vesca HOM05D000213 ORTHO05D000985 3.4e-11 71.6 65 55.4
FAN27G0400 Fragaria x ananassa HOM05D000213 ORTHO05D000985 3.4e-11 71.6 65 55.4
PGR044G1158 Punica granatum HOM05D000213 ORTHO05D000985 3.4e-11 71.6 58 63.8
Haze_21758 Corylus avellana HOM05D000213 ORTHO05D000985 4.5e-11 71.2 53 64.2
MD15G1106600 Malus domestica HOM05D000213 ORTHO05D000985 4.5e-11 71.2 57 63.2
FAN20G2276 Fragaria x ananassa HOM05D000213 ORTHO05D000985 5.9e-11 70.9 53 62.3
Cfa013281 Carpinus fangiana HOM05D000213 ORTHO05D000985 7.7e-11 70.5 53 64.2
CiPaw.07G199600 Carya illinoinensis HOM05D000213 ORTHO05D000985 7.7e-11 70.5 57 61.4
CiPaw.08G031100 Carya illinoinensis HOM05D000213 ORTHO05D000985 7.7e-11 70.5 69 55.1
MD16G1244300 Malus domestica HOM05D000213 ORTHO05D000985 7.7e-11 70.5 58 62.1
FAN15G1367 Fragaria x ananassa HOM05D000213 ORTHO05D000985 1.0e-10 70.1 53 62.3
HPP92_017132 Vanilla planifolia HOM05D000213 ORTHO05D000985 1.0e-10 70.1 62 56.5
RcHm_v2.0_Chr6g0305101 Rosa chinensis HOM05D000213 ORTHO05D000985 1.3e-10 69.7 53 62.3
Migut.A00430 Erythranthe guttata HOM05D000213 ORTHO05D000985 1.7e-10 69.3 57 61.4
Prupe.1G459100 Prunus persica HOM05D000213 ORTHO05D000985 1.7e-10 69.3 59 64.4
Hma1.2p1_0235F.1_g098940 Hydrangea macrophylla HOM05D000213 ORTHO05D000985 3.8e-10 68.2 58 56.9
Hma1.2p1_3498F.1_g336423 Hydrangea macrophylla HOM05D000213 ORTHO05D000985 3.8e-10 68.2 58 56.9
Nitab4.5_0011148g0010 Nicotiana tabacum HOM05D000213 ORTHO05D000985 3.8e-10 68.2 53 64.2
SGA_v2.0_scaffold193G40666 Striga asiatica HOM05D000213 ORTHO05D000985 3.8e-10 68.2 57 59.6
Dinv08675 Davidia involucrata HOM05D000213 ORTHO05D000985 5.0e-10 67.8 57 57.9
Nitab4.5_0000555g0130 Nicotiana tabacum HOM05D000213 ORTHO05D000985 5.0e-10 67.8 53 64.2
GSVIVG01033188001 Vitis vinifera HOM05D000213 ORTHO05D000985 5.0e-10 67.8 90 46.7
MBI14_g09154_MAGBIO Magnolia biondii HOM05D000213 ORTHO05D000985 6.5e-10 67.4 53 64.2
MBI14_g34974_MAGBIO Magnolia biondii HOM05D000213 ORTHO05D000985 6.5e-10 67.4 53 64.2
Gohir.D07G000300 Gossypium hirsutum HOM05D000213 ORTHO05D000985 8.5e-10 67.0 68 54.4
Oeu053855.1 Olea europaea HOM05D000213 ORTHO05D000985 8.5e-10 67.0 76 51.3
PGSC0003DMG400029371 Solanum tuberosum HOM05D000213 ORTHO05D000985 8.5e-10 67.0 69 56.5
Nitab4.5_0001159g0160 Nicotiana tabacum HOM05D000213 ORTHO05D000985 1.1e-09 66.6 53 60.4
CSS0019338 Camellia sinensis var. sinensis HOM05D000213 ORTHO05D000985 1.4e-09 66.2 70 52.9
Dinv25479 Davidia involucrata HOM05D000213 ORTHO05D000985 1.4e-09 66.2 75 49.3
Hma1.2p1_0726F.1_g209000 Hydrangea macrophylla HOM05D000213 ORTHO05D000985 1.4e-09 66.2 55 54.5
Nn8g40438 Nelumbo nucifera HOM05D000213 ORTHO05D000985 1.9e-09 65.9 65 53.8
FAN07G2755 Fragaria x ananassa HOM05D000213 ORTHO05D000985 2.5e-09 65.5 66 56.1
Gorai.001G002200 Gossypium raimondii HOM05D000213 ORTHO05D000985 2.5e-09 65.5 68 54.4
PGR142G3555 Punica granatum HOM05D000213 ORTHO05D000985 2.5e-09 65.5 61 57.4
Solyc12g096350.2 Solanum lycopersicum HOM05D000213 ORTHO05D000985 2.5e-09 65.5 53 64.2
Ciclev10008836m.g Citrus clementina HOM05D000213 ORTHO05D000985 3.2e-09 65.1 53 62.3
Gohir.D06G107100 Gossypium hirsutum HOM05D000213 ORTHO05D000985 3.2e-09 65.1 69 52.2
Sabra06G0053700 Salix brachista HOM05D000213 ORTHO05D000985 3.2e-09 65.1 60 58.3
Duzib168G0527 Durio zibethinus HOM05D000213 ORTHO05D000985 4.2e-09 64.7 53 62.3
Duzib187G0990 Durio zibethinus HOM05D000213 ORTHO05D000985 4.2e-09 64.7 53 62.3
FvH4_4g06830 Fragaria vesca HOM05D000213 ORTHO05D000985 5.5e-09 64.3 66 54.5
FAN12G4060 Fragaria x ananassa HOM05D000213 ORTHO05D000985 5.5e-09 64.3 66 54.5
Gohir.A06G105100 Gossypium hirsutum HOM05D000213 ORTHO05D000985 5.5e-09 64.3 69 52.2
Gorai.010G121800 Gossypium raimondii HOM05D000213 ORTHO05D000985 5.5e-09 64.3 69 52.2
GSVIVG01029265001 Vitis vinifera HOM05D000213 ORTHO05D000985 5.5e-09 64.3 87 48.3
Nitab4.5_0007342g0050 Nicotiana tabacum HOM05D000213 ORTHO05D000985 7.2e-09 63.9 42 71.4
Potri.018G008500 Populus trichocarpa HOM05D000213 ORTHO05D000985 7.2e-09 63.9 65 50.8
CSS0005905 Camellia sinensis var. sinensis HOM05D000213 ORTHO05D000985 9.4e-09 63.5 70 51.4
CDE04G3438 Ceratophyllum demersum HOM05D000213 ORTHO05D000985 9.4e-09 63.5 56 64.3
CDE07G0846 Ceratophyllum demersum HOM05D000213 ORTHO05D000985 9.4e-09 63.5 56 64.3
MELO3C003622.2 Cucumis melo HOM05D000213 ORTHO05D000985 9.4e-09 63.5 53 62.3
Dinv41204 Davidia involucrata HOM05D000213 ORTHO05D000985 9.4e-09 63.5 58 56.9
Sopen12g032210 Solanum pennellii HOM05D000213 ORTHO05D000985 9.4e-09 63.5 53 62.3
Aqoxy7G02922 Aquilegia oxysepala HOM05D000213 ORTHO05D000985 1.2e-08 63.2 55 61.8
AT2G24570 Arabidopsis thaliana HOM05D000213 ORTHO05D000985 1.2e-08 63.2 59 59.3
CsaV3_3G047140 Cucumis sativus L. HOM05D000213 ORTHO05D000985 1.2e-08 63.2 53 62.3
Sed0003080 Sechium edule HOM05D000213 ORTHO05D000985 1.2e-08 63.2 61 55.7
Actinidia22258 Actinidia chinensis HOM05D000213 ORTHO05D000985 1.6e-08 62.8 64 53.1
FAN22G1665 Fragaria x ananassa HOM05D000213 ORTHO05D000985 1.6e-08 62.8 65 55.4
THA.LOC104803868 Tarenaya hassleriana HOM05D000213 ORTHO05D000985 1.6e-08 62.8 53 60.4
HPP92_018572 Vanilla planifolia HOM05D000213 ORTHO05D000985 1.6e-08 62.8 78 47.4
Actinidia06429 Actinidia chinensis HOM05D000213 ORTHO05D000985 2.1e-08 62.4 50 64.0
Aa31sc538G30 Aethionema arabicum HOM05D000213 ORTHO05D000985 2.1e-08 62.4 62 56.5
AL4G15120 Arabidopsis lyrata HOM05D000213 ORTHO05D000985 2.1e-08 62.4 63 54.0
Carub.0004s0396 Capsella rubella HOM05D000213 ORTHO05D000985 2.1e-08 62.4 57 59.6
Manes.16G134800 Manihot esculenta HOM05D000213 ORTHO05D000985 2.7e-08 62.0 53 58.5
THA.LOC104819935 Tarenaya hassleriana HOM05D000213 ORTHO05D000985 2.7e-08 62.0 53 62.3
HPP92_010784 Vanilla planifolia HOM05D000213 ORTHO05D000985 2.7e-08 62.0 60 50.0
MD13G1239100 Malus domestica HOM05D000213 ORTHO05D000985 3.6e-08 61.6 58 56.9
Thecc.09G008400 Theobroma cacao HOM05D000213 ORTHO05D000985 3.6e-08 61.6 53 60.4
Zm00001eb086280 Zea mays HOM05D000213 ORTHO05D000985 3.6e-08 61.6 72 51.4
CiPaw.07G211500 Carya illinoinensis HOM05D000213 ORTHO05D000985 4.7e-08 61.2 53 60.4
Eucgr.C04011 Eucalyptus grandis HOM05D000213 ORTHO05D000985 4.7e-08 61.2 66 53.0
Oeu018563.1 Olea europaea HOM05D000213 ORTHO05D000985 4.7e-08 61.2 56 55.4
PSO063G2644 Papaver somniferum HOM05D000213 ORTHO05D000985 4.7e-08 61.2 33 84.8
PSO170G5439 Papaver somniferum HOM05D000213 ORTHO05D000985 4.7e-08 61.2 33 84.8
QL12p025384 Quercus lobata HOM05D000213 ORTHO05D000985 4.7e-08 61.2 63 50.8
Sabra18G0015600 Salix brachista HOM05D000213 ORTHO05D000985 4.7e-08 61.2 56 55.4
Sed0010336 Sechium edule HOM05D000213 ORTHO05D000985 4.7e-08 61.2 53 60.4
Solyc08g006320.4 Solanum lycopersicum HOM05D000213 ORTHO05D000985 4.7e-08 61.2 53 58.5
Sopen08g002300 Solanum pennellii HOM05D000213 ORTHO05D000985 4.7e-08 61.2 53 58.5
PGSC0003DMG400009530 Solanum tuberosum HOM05D000213 ORTHO05D000985 4.7e-08 61.2 53 58.5
ClCG06G013780 Citrullus lanatus HOM05D000213 ORTHO05D000985 6.1e-08 60.8 63 50.8
Glyma.17G057100 Glycine max HOM05D000213 ORTHO05D000985 6.1e-08 60.8 48 58.3
Sed0028224 Sechium edule HOM05D000213 ORTHO05D000985 6.1e-08 60.8 57 57.9
CANSAT25G3190 Cannabis sativa HOM05D000213 ORTHO05D000985 7.9e-08 60.5 53 58.5
COL.COLO4_19021 Corchorus olitorius HOM05D000213 ORTHO05D000985 7.9e-08 60.5 53 58.5
Cpa.g.sc768.1 Carica papaya HOM05D000213 ORTHO05D000985 1.0e-07 60.1 53 58.5
Gorai.009G066900 Gossypium raimondii HOM05D000213 ORTHO05D000985 1.0e-07 60.1 53 58.5
Os04g0287400 Oryza sativa ssp. japonica HOM05D000213 ORTHO05D000985 1.0e-07 60.1 102 47.1
Peaxi162Scf00045g01641 Petunia axillaris HOM05D000213 ORTHO05D000985 1.0e-07 60.1 54 59.3
Prupe.1G071400 Prunus persica HOM05D000213 ORTHO05D000985 1.0e-07 60.1 59 54.2
BcaC01g01079 Brassica carinata HOM05D000213 ORTHO05D000985 1.4e-07 59.7 71 52.1
A04p18920 Brassica napus HOM05D000213 ORTHO05D000985 1.4e-07 59.7 57 57.9
C03p87840 Brassica napus HOM05D000213 ORTHO05D000985 1.4e-07 59.7 71 52.1
BolC3t21098H Brassica oleracea HOM05D000213 ORTHO05D000985 1.4e-07 59.7 71 52.1
FAN17G2331 Fragaria x ananassa HOM05D000213 ORTHO05D000985 1.4e-07 59.7 65 53.8
Potri.006G072400 Populus trichocarpa HOM05D000213 ORTHO05D000985 1.4e-07 59.7 58 53.4
Hund13908 Selenicereus undatus HOM05D000213 ORTHO05D000985 1.4e-07 59.7 62 51.6
TWI34G1907 Tripterygium wilfordii HOM05D000213 ORTHO05D000985 1.4e-07 59.7 58 55.2
Sp4g03560 Schrenkiella parvula HOM05D000213 ORTHO05D000985 1.8e-07 59.3 53 60.4
Aa31LG2G18800 Aethionema arabicum HOM05D000213 ORTHO05D000985 2.3e-07 58.9 73 47.9
A01p06680 Brassica napus HOM05D000213 ORTHO05D000985 2.3e-07 58.9 53 60.4
BraA01t00627Z Brassica rapa HOM05D000213 ORTHO05D000985 2.3e-07 58.9 53 60.4
ClCG05G026460 Citrullus lanatus HOM05D000213 ORTHO05D000985 2.3e-07 58.9 88 45.5
ATR0580G342 Amborella trichopoda HOM05D000213 ORTHO05D000985 3.0e-07 58.5 58 56.9
BcaB03g12704 Brassica carinata HOM05D000213 ORTHO05D000985 3.0e-07 58.5 53 58.5
BcaC09g51935 Brassica carinata HOM05D000213 ORTHO05D000985 3.0e-07 58.5 53 60.4
A08p18560 Brassica napus HOM05D000213 ORTHO05D000985 3.0e-07 58.5 53 58.5
C01p07450 Brassica napus HOM05D000213 ORTHO05D000985 3.0e-07 58.5 53 60.4
BolC1t00728H Brassica oleracea HOM05D000213 ORTHO05D000985 3.0e-07 58.5 53 60.4
BraA08t33818Z Brassica rapa HOM05D000213 ORTHO05D000985 3.0e-07 58.5 53 58.5
Carub.0007s0902 Capsella rubella HOM05D000213 ORTHO05D000985 3.0e-07 58.5 60 56.7
Thhalv10000242m.g Eutrema salsugineum HOM05D000213 ORTHO05D000985 3.0e-07 58.5 57 56.1
Glyma.13G102000 Glycine max HOM05D000213 ORTHO05D000985 3.0e-07 58.5 48 56.2
Gohir.A07G002000 Gossypium hirsutum HOM05D000213 ORTHO05D000985 3.0e-07 58.5 90 45.6
Gohir.D05G066100 Gossypium hirsutum HOM05D000213 ORTHO05D000985 3.0e-07 58.5 74 47.3
Peaxi162Scf00459g00841 Petunia axillaris HOM05D000213 ORTHO05D000985 3.0e-07 58.5 40 62.5
AL7G20480 Arabidopsis lyrata HOM05D000213 ORTHO05D000985 3.9e-07 58.2 53 58.5
AT4G31550 Arabidopsis thaliana HOM05D000213 ORTHO05D000985 3.9e-07 58.2 53 58.5
BcaNung04130 Brassica carinata HOM05D000213 ORTHO05D000985 3.9e-07 58.2 53 60.4
MSTRG.25785 Avicennia marina HOM05D000213 ORTHO05D000985 5.1e-07 57.8 57 50.9
BcaC02g08440 Brassica carinata HOM05D000213 ORTHO05D000985 5.1e-07 57.8 53 60.4
C04p54170 Brassica napus HOM05D000213 ORTHO05D000985 5.1e-07 57.8 53 60.4
C07p58730 Brassica napus HOM05D000213 ORTHO05D000985 5.1e-07 57.8 57 56.1
BolC7t46322H Brassica oleracea HOM05D000213 ORTHO05D000985 5.1e-07 57.8 57 56.1
Medtr4g127040 Medicago truncatula HOM05D000213 ORTHO05D000985 5.1e-07 57.8 51 58.8
Psat6g033560 Pisum sativum HOM05D000213 ORTHO05D000985 5.1e-07 57.8 69 49.3
SHI48743 Sapria himalayana HOM05D000213 ORTHO05D000985 5.1e-07 57.8 58 51.7
VMungo1215G1806 Vigna mungo HOM05D000213 ORTHO05D000985 5.1e-07 57.8 44 59.1
VMungo1309G0672 Vigna mungo HOM05D000213 ORTHO05D000985 5.1e-07 57.8 59 54.2
BcaB06g27985 Brassica carinata HOM05D000213 ORTHO05D000985 6.7e-07 57.4 53 56.6
Ca_21266_v3 Cicer arietinum L. HOM05D000213 ORTHO05D000985 6.7e-07 57.4 39 64.1
Cc08_g06420 Coffea canephora HOM05D000213 ORTHO05D000985 6.7e-07 57.4 77 48.1
Psat4g013640 Pisum sativum HOM05D000213 ORTHO05D000985 6.7e-07 57.4 57 56.1
Sp7g29380 Schrenkiella parvula HOM05D000213 ORTHO05D000985 6.7e-07 57.4 53 58.5
BcaNung04581 Brassica carinata HOM05D000213 ORTHO05D000985 8.8e-07 57.0 53 58.5
CARHR117430 Cardamine hirsuta HOM05D000213 ORTHO05D000985 8.8e-07 57.0 62 53.2
CARHR239430 Cardamine hirsuta HOM05D000213 ORTHO05D000985 8.8e-07 57.0 53 56.6
Lalb_Chr23g0276611 Lupinus albus HOM05D000213 ORTHO05D000985 8.8e-07 57.0 66 47.0
A03p60850 Brassica napus HOM05D000213 ORTHO05D000985 1.1e-06 56.6 74 45.9
BolC4t26968H Brassica oleracea HOM05D000213 ORTHO05D000985 1.1e-06 56.6 53 58.5
BraA03t15121Z Brassica rapa HOM05D000213 ORTHO05D000985 1.1e-06 56.6 74 45.9
Glyma.14G135400 Glycine max HOM05D000213 ORTHO05D000985 1.1e-06 56.6 68 50.0
Potri.018G139300 Populus trichocarpa HOM05D000213 ORTHO05D000985 1.1e-06 56.6 89 40.4
Hund25573 Selenicereus undatus HOM05D000213 ORTHO05D000985 1.1e-06 56.6 35 68.6
THA.LOC104803623 Tarenaya hassleriana HOM05D000213 ORTHO05D000985 1.1e-06 56.6 53 60.4
CDE05G2159 Ceratophyllum demersum HOM05D000213 ORTHO05D000985 1.5e-06 56.2 41 63.4
CDE05G2448 Ceratophyllum demersum HOM05D000213 ORTHO05D000985 1.5e-06 56.2 41 63.4
Gohir.A05G063500 Gossypium hirsutum HOM05D000213 ORTHO05D000985 1.5e-06 56.2 74 45.9
Medtr0229s0060 Medicago truncatula HOM05D000213 ORTHO05D000985 1.5e-06 56.2 53 54.7
Medtr1g009613 Medicago truncatula HOM05D000213 ORTHO05D000985 1.5e-06 56.2 53 54.7
RcHm_v2.0_Chr4g0398741 Rosa chinensis HOM05D000213 ORTHO05D000985 1.5e-06 56.2 58 55.2
arahy.Tifrunner.gnm1.ann1.091A4A Arachis hypogaea HOM05D000213 ORTHO05D000985 2.0e-06 55.8 44 59.1
Sabra07G0042300 Salix brachista HOM05D000213 ORTHO05D000985 2.0e-06 55.8 69 47.8
CDE05G2598 Ceratophyllum demersum HOM05D000213 ORTHO05D000985 2.6e-06 55.5 53 56.6
Ca_02133_v3 Cicer arietinum L. HOM05D000213 ORTHO05D000985 2.6e-06 55.5 58 55.2
MELO3C017415.2 Cucumis melo HOM05D000213 ORTHO05D000985 2.6e-06 55.5 70 48.6
Thhalv10025646m.g Eutrema salsugineum HOM05D000213 ORTHO05D000985 2.6e-06 55.5 54 51.9
Phvul.009G233900 Phaseolus vulgaris HOM05D000213 ORTHO05D000985 2.6e-06 55.5 33 72.7
TWI63G0345 Tripterygium wilfordii HOM05D000213 ORTHO05D000985 2.6e-06 55.5 58 50.0
EL10Ac2g02415 Beta vulgaris HOM05D000213 ORTHO05D000985 3.3e-06 55.1 55 56.4
Glyma.09G061900 Glycine max HOM05D000213 ORTHO05D000985 3.3e-06 55.1 58 53.4
Peaxi162Scf00045g01627 Petunia axillaris HOM05D000213 ORTHO05D306222 3.3e-06 55.1 70 52.9
arahy.Tifrunner.gnm1.ann1.ZN7Y7A Arachis hypogaea HOM05D000213 ORTHO05D000985 4.4e-06 54.7 32 75.0
BraA04t17494Z Brassica rapa HOM05D000213 ORTHO05D000985 4.4e-06 54.7 67 49.3
CDE05G1828 Ceratophyllum demersum HOM05D000213 ORTHO05D000985 4.4e-06 54.7 53 56.6
Os04g0605100 Oryza sativa ssp. japonica HOM05D000213 ORTHO05D000985 4.4e-06 54.7 57 52.6
Phvul.001G060200 Phaseolus vulgaris HOM05D000213 ORTHO05D000985 4.4e-06 54.7 57 52.6
Phvul.003G139500 Phaseolus vulgaris HOM05D000213 ORTHO05D000985 4.4e-06 54.7 56 51.8
TPR.G5418 Trifolium pratense HOM05D000213 ORTHO05D000985 4.4e-06 54.7 33 72.7
Lj4g0020378 Lotus japonicus HOM05D000213 ORTHO05D000985 5.7e-06 54.3 40 60.0
Lj5g0015644 Lotus japonicus HOM05D000213 ORTHO05D000985 7.4e-06 53.9 69 46.4
CDE02G3711 Ceratophyllum demersum HOM05D000213 ORTHO05D000985 9.7e-06 53.5 66 51.5
VMungo0647G0690 Vigna mungo HOM05D000213 ORTHO05D000985 9.7e-06 53.5 53 54.7


User provided reference genes

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