Gene: TPR.G5418

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G5418
  • Transcript Identifier TPR.T5606
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG2 : 27836467-27837655 : positive

Gene Family Information

  • ID HOM05D000213
  • #Genes/#Species 1876/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA5606.v2
  • id Tp57577_TGAC_v2_gene5418.v2
  • pacid 35972623

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009938
ISO
PLAZA Integrative Orthologynegative regulation of gibberellic acid mediated signaling pathway Os04g0287400
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin Os04g0287400
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid Os04g0287400
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT2G24570
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT2G24570
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc08g006320.4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0005516
ISO
PLAZA Integrative Orthologycalmodulin binding AT2G24570
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G24570
GO:1990841
ISO
PLAZA Integrative Orthologypromoter-specific chromatin binding Os04g0287400
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G24570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G24570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036576 WRKY domain superfamily
IPR003657 WRKY domain
IPR018872 Zn-cluster domain
IPR044810 WRKY transcription factor, plant
Mapman id Description
15.5.22.1 RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY)