Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 6.8e-222 773.9 439 100.0
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.8e-118 430.3 348 60.3
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 7.0e-118 428.3 348 59.8
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 2.7e-117 426.4 370 57.3
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 3.5e-117 426.0 374 57.5
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 5.9e-117 425.2 373 57.9
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 2.9e-116 422.9 348 59.8
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 5.0e-116 422.2 372 56.7
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 1.5e-115 420.6 350 59.1
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.9e-115 420.2 351 59.0
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 4.2e-115 419.1 349 59.0
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 5.5e-115 418.7 348 58.6
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 5.5e-115 418.7 349 59.3
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 9.4e-115 417.9 372 57.0
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 2.1e-114 416.8 345 58.3
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 6.1e-114 415.2 348 58.6
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 1.4e-113 414.1 372 56.2
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.8e-113 413.7 347 57.6
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 2.3e-113 413.3 371 55.5
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 4.0e-113 412.5 347 58.5
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 4.0e-113 412.5 372 56.2
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 5.2e-113 412.1 348 58.3
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 8.8e-113 411.4 352 59.1
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 8.8e-113 411.4 348 58.3
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 4.4e-112 409.1 372 54.8
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 4.4e-112 409.1 351 57.3
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 9.8e-112 407.9 345 58.8
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 1.3e-111 407.5 348 55.7
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 2.8e-111 406.4 348 59.5
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 2.8e-111 406.4 349 57.3
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 3.7e-111 406.0 372 54.3
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 3.7e-111 406.0 355 55.8
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 6.3e-111 405.2 372 55.9
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 8.3e-111 404.8 348 56.0
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 8.3e-111 404.8 349 56.7
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 1.1e-110 404.4 355 55.5
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 3.1e-110 402.9 348 57.2
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 3.1e-110 402.9 345 56.5
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 4.1e-110 402.5 383 54.3
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 9.1e-110 401.4 348 57.8
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 1.2e-109 401.0 351 55.8
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.6e-109 400.6 348 56.6
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.6e-109 400.6 394 55.1
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 1.6e-109 400.6 348 58.6
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 1.6e-109 400.6 348 58.6
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 1.6e-109 400.6 348 58.3
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 2.0e-109 400.2 347 56.2
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 2.0e-109 400.2 348 55.5
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 2.7e-109 399.8 347 55.9
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 5.9e-109 398.7 308 61.4
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 5.9e-109 398.7 354 54.2
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.0e-108 397.9 345 57.7
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 1.0e-108 397.9 361 53.7
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 1.0e-108 397.9 350 55.7
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 2.3e-108 396.7 348 55.5
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 2.3e-108 396.7 348 55.5
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.9e-108 396.4 345 57.4
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 3.8e-108 396.0 348 55.2
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 5.0e-108 395.6 352 55.4
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 5.0e-108 395.6 348 56.3
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 6.6e-108 395.2 345 57.1
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 8.6e-108 394.8 350 56.9
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.1e-107 394.4 345 57.1
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 1.9e-107 393.7 348 54.9
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 1.9e-107 393.7 351 54.1
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 4.2e-107 392.5 364 53.6
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 7.2e-107 391.7 349 55.6
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 9.5e-107 391.3 348 54.9
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 1.2e-106 391.0 348 54.6
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 1.6e-106 390.6 354 55.4
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 4.7e-106 389.0 355 56.1
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 6.1e-106 388.7 327 58.4
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 1.8e-105 387.1 346 54.6
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 2.3e-105 386.7 348 53.2
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 5.2e-105 385.6 348 54.0
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 5.2e-105 385.6 348 54.0
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 5.2e-105 385.6 351 53.0
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 1.5e-104 384.0 348 53.7
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 1.5e-104 384.0 362 55.2
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 2.0e-104 383.6 348 54.0
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 4.4e-104 382.5 348 53.4
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 5.7e-104 382.1 351 55.6
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 5.7e-104 382.1 351 53.0
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 9.8e-104 381.3 348 53.2
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 1.3e-103 380.9 346 54.0
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 2.2e-103 380.2 351 54.4
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 3.7e-103 379.4 316 58.2
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 4.9e-103 379.0 348 53.7
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 8.3e-103 378.3 375 52.8
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.8e-102 377.1 398 48.7
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 1.2e-101 374.4 348 54.3
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 8.6e-100 368.2 373 52.3
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 2.1e-98 363.6 326 54.6
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 9.8e-96 354.8 381 50.4
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.6e-93 347.4 334 51.8
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 2.0e-93 347.1 412 45.6
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 1.0e-92 344.7 318 52.5
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 5.0e-92 342.4 334 51.2
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 2.5e-91 340.1 331 51.7
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 3.2e-86 323.2 309 52.8
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 7.1e-86 322.0 298 54.0
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 9.2e-86 321.6 238 64.3
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 3.9e-84 316.2 330 49.4
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 6.6e-84 315.5 294 53.4
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 1.8e-81 307.4 232 61.6
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 3.2e-78 296.6 292 52.7
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.1e-77 293.9 265 53.2
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.0e-76 290.0 273 53.8
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 1.8e-65 254.2 232 54.3
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 4.4e-64 249.6 300 46.0
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 3.2e-62 243.4 255 49.8
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 1.1e-59 235.0 325 40.6
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 4.8e-58 229.6 251 48.6
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.4e-57 228.0 158 65.8
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 3.1e-57 226.9 174 59.8
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 5.3e-57 226.1 348 38.2
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 9.9e-56 221.9 304 43.1
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 1.1e-51 208.4 318 40.3
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 4.9e-47 193.0 154 57.1
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 7.9e-45 185.7 224 42.9
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 5.7e-43 179.5 161 54.0
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.3e-39 168.3 135 60.7
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 8.2e-34 149.1 282 32.6
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 1.0e-20 105.5 78 65.4
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 1.4e-20 105.1 69 69.6
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 3.3e-19 100.5 60 80.0
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 5.0e-15 86.7 124 39.5
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 3.2e-14 84.0 109 44.0
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 9.7e-11 72.4 153 31.4
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 1.0e-07 62.4 44 63.6


User provided reference genes

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