Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 3.8e-105 384.8 186 100.0
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.1e-67 260.4 187 65.2
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 6.9e-67 257.7 186 64.0
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 9.0e-67 257.3 185 61.6
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 7.7e-66 254.2 183 61.7
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 1.7e-65 253.1 186 61.3
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 1.7e-65 253.1 183 61.2
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 6.5e-65 251.1 186 61.3
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.1e-64 250.4 186 61.3
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 1.4e-64 250.0 186 60.2
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 2.5e-64 249.2 186 62.4
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 3.2e-64 248.8 186 60.2
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 4.2e-64 248.4 186 60.8
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 4.2e-64 248.4 186 61.3
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 5.5e-64 248.1 183 61.7
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 9.4e-64 247.3 186 61.8
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 1.6e-63 246.5 186 58.6
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 2.1e-63 246.1 185 58.4
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 2.1e-63 246.1 177 61.0
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 3.6e-63 245.4 183 61.2
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 3.6e-63 245.4 186 61.8
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 7.9e-63 244.2 187 61.0
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 2.3e-62 242.7 186 59.7
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 3.9e-62 241.9 183 60.1
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 5.1e-62 241.5 183 60.1
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 2.0e-61 239.6 177 61.6
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 4.3e-61 238.4 186 59.7
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 7.4e-61 237.7 178 61.2
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 7.4e-61 237.7 186 57.5
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 7.4e-61 237.7 186 58.6
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 1.7e-60 236.5 186 60.2
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 4.8e-60 235.0 185 56.8
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 1.8e-59 233.0 186 54.8
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.4e-59 232.6 188 56.4
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.1e-59 232.3 188 56.9
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 3.1e-59 232.3 206 55.3
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 2.6e-58 229.2 187 55.6
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 1.0e-57 227.3 186 54.8
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 1.0e-57 227.3 187 55.1
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 1.0e-57 227.3 187 55.1
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 1.0e-57 227.3 187 55.1
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 2.2e-57 226.1 186 53.2
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 2.9e-57 225.7 174 59.2
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 3.8e-57 225.3 186 57.0
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 8.5e-57 224.2 187 54.5
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 8.5e-57 224.2 187 54.5
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 1.9e-56 223.0 183 55.7
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 2.5e-56 222.6 189 53.4
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 3.2e-56 222.2 186 52.2
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 4.2e-56 221.9 186 52.7
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 7.2e-56 221.1 185 53.0
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 9.4e-56 220.7 186 55.4
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 1.2e-55 220.3 178 59.0
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 1.6e-55 219.9 186 53.2
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 1.6e-55 219.9 186 58.1
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 2.1e-55 219.5 186 55.4
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 3.6e-55 218.8 177 55.9
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 6.1e-55 218.0 186 53.2
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 1.4e-54 216.9 177 54.2
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 1.8e-54 216.5 186 55.4
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 3.9e-54 215.3 187 52.4
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 3.9e-54 215.3 177 55.4
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 5.1e-54 214.9 189 52.9
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 4.4e-53 211.8 202 49.0
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 4.4e-53 211.8 185 49.7
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 4.4e-53 211.8 236 44.9
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 1.3e-52 210.3 186 50.0
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 2.2e-52 209.5 180 51.7
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 2.2e-52 209.5 180 51.7
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 2.8e-52 209.1 189 52.4
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 2.8e-52 209.1 180 52.8
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 3.7e-52 208.8 182 53.8
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 6.3e-52 208.0 180 51.1
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 6.3e-52 208.0 180 51.1
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 8.2e-52 207.6 186 53.2
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 8.2e-52 207.6 186 50.5
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 9.1e-51 204.1 186 50.5
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 1.2e-50 203.8 186 48.9
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 1.5e-50 203.4 186 50.0
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 3.5e-50 202.2 186 50.0
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 3.5e-50 202.2 186 50.0
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 5.9e-50 201.4 208 46.6
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 3.8e-49 198.7 185 50.8
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.3e-46 189.5 177 49.7
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 3.9e-46 188.7 135 63.7
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 9.7e-45 184.1 145 56.6
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.7e-44 183.3 185 45.4
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 2.6e-42 176.0 216 44.9
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 1.9e-40 169.9 165 49.1
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 9.4e-40 167.5 185 42.2
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 1.8e-38 163.3 182 44.5
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 4.4e-37 158.7 138 50.7
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 4.4e-37 158.7 138 50.7
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 5.7e-37 158.3 135 51.1
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.1e-35 152.5 115 60.0
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 9.1e-35 151.0 119 58.8
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 4.5e-34 148.7 152 45.4
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 4.5e-34 148.7 106 60.4
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 1.1e-32 144.1 105 61.0
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 1.5e-32 143.7 184 39.1
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 3.8e-25 119.0 102 51.0
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 2.5e-24 116.3 179 35.2
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.6e-23 112.5 182 34.1
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 1.4e-22 110.5 177 36.2
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.8e-22 110.2 97 53.6
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 1.8e-19 100.1 88 53.4
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 3.1e-19 99.4 97 49.5
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 3.9e-17 92.4 95 42.1
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 6.6e-17 91.7 95 42.1
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.1e-16 90.9 143 32.9
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 1.0e-14 84.3 117 37.6
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 1.0e-14 84.3 117 37.6
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 1.0e-14 84.3 117 37.6
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.4e-14 84.0 37 100.0
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 2.3e-14 83.2 110 39.1
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.9e-12 76.3 42 83.3
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 8.3e-12 74.7 92 42.4
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 2.7e-10 69.7 151 31.8
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 7.8e-10 68.2 64 54.7
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 5.0e-09 65.5 44 65.9
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 3.3e-08 62.8 42 66.7
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 1.6e-07 60.5 42 64.3
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 1.6e-07 60.5 42 64.3
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 6.2e-07 58.5 52 50.0
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 1.8e-06 57.0 42 57.1


User provided reference genes

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