Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.8e-78 295.8 143 100.0
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.1e-75 286.6 141 98.6
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 1.8e-62 242.7 135 85.2
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 1.5e-61 239.6 135 83.7
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 2.6e-61 238.8 135 83.0
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 2.6e-61 238.8 135 83.0
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 4.4e-61 238.0 135 83.0
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 5.7e-61 237.7 135 82.2
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 7.4e-61 237.3 135 82.2
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 7.4e-61 237.3 135 82.2
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 1.3e-60 236.5 135 81.5
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 1.7e-60 236.1 135 82.2
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 2.2e-60 235.7 135 82.2
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 2.8e-60 235.3 135 80.7
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 3.7e-60 235.0 135 82.2
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 3.7e-60 235.0 135 80.7
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 4.8e-60 234.6 135 81.5
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 8.2e-60 233.8 135 81.5
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 8.2e-60 233.8 135 82.2
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 1.1e-59 233.4 135 80.7
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 1.1e-59 233.4 135 80.7
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 1.4e-59 233.0 135 80.0
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 1.4e-59 233.0 135 80.7
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 1.4e-59 233.0 135 81.5
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 1.8e-59 232.6 135 80.7
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 1.8e-59 232.6 135 80.7
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 1.8e-59 232.6 135 81.5
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 1.8e-59 232.6 135 81.5
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 2.4e-59 232.3 135 81.5
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 3.1e-59 231.9 135 81.5
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 3.1e-59 231.9 135 81.5
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 3.1e-59 231.9 135 80.7
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 4.1e-59 231.5 135 80.7
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 5.3e-59 231.1 135 80.7
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 7.0e-59 230.7 135 80.0
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 7.0e-59 230.7 135 80.0
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 7.0e-59 230.7 135 79.3
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 9.1e-59 230.3 135 80.7
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 9.1e-59 230.3 135 79.3
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 1.2e-58 229.9 135 79.3
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 1.2e-58 229.9 135 80.0
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 1.2e-58 229.9 135 79.3
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 1.6e-58 229.6 135 80.7
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 1.6e-58 229.6 135 79.3
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 2.0e-58 229.2 135 79.3
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 2.6e-58 228.8 135 80.0
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 2.6e-58 228.8 135 80.0
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 2.6e-58 228.8 135 80.0
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 3.5e-58 228.4 134 79.9
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 3.5e-58 228.4 135 78.5
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 5.9e-58 227.6 135 80.0
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 5.9e-58 227.6 135 80.0
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 7.7e-58 227.3 135 78.5
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 7.7e-58 227.3 135 78.5
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 7.7e-58 227.3 135 79.3
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 7.7e-58 227.3 135 79.3
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 7.7e-58 227.3 135 79.3
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 1.0e-57 226.9 135 78.5
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 1.0e-57 226.9 135 78.5
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 1.0e-57 226.9 135 80.0
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 1.3e-57 226.5 134 79.1
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 1.3e-57 226.5 135 78.5
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 1.7e-57 226.1 135 78.5
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 1.7e-57 226.1 135 80.0
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 2.2e-57 225.7 135 77.8
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 2.2e-57 225.7 135 79.3
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 2.2e-57 225.7 135 79.3
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 2.9e-57 225.3 134 77.6
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 3.8e-57 224.9 134 78.4
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 3.8e-57 224.9 134 78.4
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 3.8e-57 224.9 135 78.5
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 3.8e-57 224.9 135 79.3
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 3.8e-57 224.9 133 79.7
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 3.8e-57 224.9 135 79.3
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 5.0e-57 224.6 134 78.4
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 5.0e-57 224.6 135 77.0
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 6.5e-57 224.2 135 79.3
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 6.5e-57 224.2 135 79.3
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 8.5e-57 223.8 135 81.5
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 8.5e-57 223.8 135 79.3
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 1.1e-56 223.4 135 79.3
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.5e-56 223.0 135 79.3
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 7.2e-56 220.7 134 77.6
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 9.4e-56 220.3 135 77.8
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 1.2e-55 219.9 135 77.0
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 1.2e-55 219.9 135 77.8
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 2.7e-55 218.8 134 76.9
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 3.6e-55 218.4 144 75.0
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 1.0e-54 216.9 135 77.8
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.0e-54 216.9 134 76.1
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 1.4e-54 216.5 135 75.6
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 4.0e-54 214.9 135 76.3
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 4.0e-54 214.9 144 73.6
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 2.0e-53 212.6 135 75.6
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 4.4e-53 211.5 134 73.1
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 3.1e-51 205.3 135 71.9
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 7.0e-51 204.1 134 71.6
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 1.1e-48 196.8 135 67.4
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 2.5e-48 195.7 117 79.5
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 2.1e-47 192.6 135 68.9
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 1.0e-46 190.3 117 76.1
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 1.4e-46 189.9 116 78.4
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 1.4e-46 189.9 118 78.8
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 1.2e-45 186.8 134 64.2
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 1.0e-41 173.7 134 63.4
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 4.2e-40 168.3 135 60.7
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 2.0e-37 159.5 134 57.5
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 6.3e-36 154.5 124 64.5
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.8e-35 152.9 142 57.7
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 4.5e-34 148.3 92 77.2
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 1.0e-33 147.1 92 76.1
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 1.7e-33 146.4 89 78.7
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 6.6e-33 144.4 111 64.9
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 8.6e-33 144.1 138 53.6
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 2.8e-31 139.0 77 83.1
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 6.1e-31 137.9 137 53.3
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 1.8e-30 136.3 94 69.1
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.2e-29 133.7 83 73.5
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 2.6e-29 132.5 83 74.7
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.8e-27 126.3 135 48.9
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 5.2e-22 108.2 90 64.4
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 1.3e-20 103.6 134 41.8
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 2.4e-19 99.4 133 45.1
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 7.3e-16 87.8 141 36.9
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 1.4e-14 83.6 43 83.7
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 2.7e-10 69.3 74 41.9


User provided reference genes

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