Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 2.5e-187 658.7 348 100.0
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 4.5e-59 232.6 351 44.2
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 4.2e-57 226.1 278 46.4
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 6.0e-56 222.2 278 46.0
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 1.8e-55 220.7 278 43.9
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 3.3e-54 216.5 313 43.1
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.3e-53 214.5 311 42.8
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 3.7e-53 213.0 314 43.0
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 8.1e-53 211.8 354 40.1
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 2.4e-52 210.3 280 45.7
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 2.4e-52 210.3 355 40.0
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 5.3e-52 209.1 281 45.6
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 9.0e-52 208.4 351 40.7
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 9.0e-52 208.4 364 39.6
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 9.0e-52 208.4 275 43.6
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 2.6e-51 206.8 276 46.0
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 1.0e-50 204.9 347 41.8
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 2.9e-50 203.4 285 46.3
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 3.8e-50 203.0 262 45.8
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 1.9e-49 200.7 283 42.4
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.5e-49 200.3 370 39.5
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 2.5e-49 200.3 280 43.9
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 2.5e-49 200.3 374 37.2
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 2.5e-49 200.3 276 42.8
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 3.2e-49 199.9 361 39.3
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 1.2e-48 198.0 272 44.9
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.6e-48 197.6 275 43.3
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 2.1e-48 197.2 360 41.7
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 2.7e-48 196.8 274 42.0
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 6.0e-48 195.7 275 42.9
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 1.3e-47 194.5 350 38.6
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 2.3e-47 193.7 328 39.6
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 2.3e-47 193.7 355 38.6
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 2.3e-47 193.7 266 43.2
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 5.1e-47 192.6 255 44.3
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 1.1e-46 191.4 279 40.5
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 2.5e-46 190.3 349 38.7
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 4.3e-46 189.5 359 38.2
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 7.4e-46 188.7 277 41.2
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 9.6e-46 188.3 363 38.3
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 1.3e-45 188.0 279 42.7
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 2.1e-45 187.2 292 39.4
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.8e-45 186.8 306 39.2
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.7e-45 186.4 304 40.5
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 4.8e-45 186.0 278 39.9
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 4.8e-45 186.0 265 39.2
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 6.3e-45 185.7 275 41.1
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 6.3e-45 185.7 311 38.3
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 8.2e-45 185.3 282 40.4
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 8.2e-45 185.3 356 37.4
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 1.8e-44 184.1 268 42.2
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 2.4e-44 183.7 301 38.9
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 2.4e-44 183.7 361 38.8
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 3.1e-44 183.3 376 35.9
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 3.1e-44 183.3 283 40.6
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 4.1e-44 183.0 351 39.9
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 6.9e-44 182.2 280 38.9
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 6.9e-44 182.2 356 37.4
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 9.0e-44 181.8 371 37.5
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 1.2e-43 181.4 259 43.6
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 1.2e-43 181.4 266 41.0
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.5e-43 181.0 349 38.1
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 1.5e-43 181.0 263 41.4
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 2.0e-43 180.6 273 40.7
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 2.6e-43 180.3 280 38.6
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 7.6e-43 178.7 358 36.0
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 1.3e-42 177.9 348 36.5
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 1.7e-42 177.6 364 36.8
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 3.8e-42 176.4 274 40.9
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 5.0e-42 176.0 364 37.4
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 8.5e-42 175.3 356 35.7
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 4.2e-41 172.9 261 39.1
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 4.2e-41 172.9 280 37.9
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 4.2e-41 172.9 353 36.5
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 4.2e-41 172.9 367 36.8
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 7.2e-41 172.2 353 37.1
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 9.3e-41 171.8 353 35.4
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 1.2e-40 171.4 352 35.2
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 1.6e-40 171.0 267 38.6
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 2.1e-40 170.6 285 40.4
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 2.1e-40 170.6 359 37.6
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 4.6e-40 169.5 368 38.9
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 7.9e-40 168.7 241 39.8
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.0e-39 168.3 272 38.6
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 1.3e-39 167.9 280 37.9
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 5.1e-39 166.0 348 37.1
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 8.7e-39 165.2 321 35.2
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 8.7e-39 165.2 330 37.3
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 4.3e-38 162.9 214 44.4
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 4.8e-37 159.5 348 35.6
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 2.4e-36 157.1 306 38.2
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 2.4e-36 157.1 355 35.2
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 1.5e-35 154.5 270 37.0
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 3.4e-35 153.3 220 44.5
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.0e-34 151.8 220 41.4
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 1.3e-34 151.4 204 41.7
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 1.3e-34 151.4 250 40.0
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 6.5e-34 149.1 358 33.5
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 2.5e-33 147.1 240 37.1
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.6e-32 144.4 282 36.9
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 3.6e-32 143.3 324 35.2
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 1.1e-30 138.3 263 38.4
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 2.0e-30 137.5 281 39.5
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 5.7e-30 136.0 293 37.5
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 1.7e-29 134.4 485 26.8
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.8e-29 133.7 363 35.0
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 1.1e-28 131.7 282 35.8
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 6.9e-28 129.0 299 33.4
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 1.5e-27 127.9 172 44.8
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 1.3e-26 124.8 373 30.0
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 8.5e-26 122.1 253 34.0
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 5.5e-25 119.4 158 43.0
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 3.3e-22 110.2 307 34.5
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 6.3e-21 105.9 250 30.8
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 5.0e-18 96.3 302 30.8
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 3.6e-16 90.1 93 50.5
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 3.3e-14 83.6 177 35.0
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 1.8e-12 77.8 79 50.6
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 5.5e-09 66.2 214 30.4
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 3.0e-07 60.5 213 27.2
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 5.7e-06 56.2 244 27.5


User provided reference genes

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