Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 9.2e-204 713.4 370 100.0
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 3.1e-167 592.0 463 73.2
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 2.5e-76 290.0 403 44.2
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 2.8e-75 286.6 450 41.3
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 6.2e-75 285.4 473 40.2
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 1.1e-74 284.6 473 40.2
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 3.1e-74 283.1 454 40.1
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 5.2e-74 282.3 430 41.6
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 6.8e-74 282.0 439 41.2
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 8.9e-74 281.6 439 40.8
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 8.9e-74 281.6 439 39.9
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 1.2e-73 281.2 446 39.5
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.4e-73 279.6 455 40.0
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 3.4e-73 279.6 413 41.9
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 5.8e-73 278.9 439 40.1
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 7.5e-73 278.5 442 38.5
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 7.5e-73 278.5 435 41.4
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 9.8e-73 278.1 439 41.7
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 9.8e-73 278.1 440 41.8
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 9.8e-73 278.1 434 41.7
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 1.7e-72 277.3 441 40.4
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 1.7e-72 277.3 436 40.6
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 1.7e-72 277.3 445 39.6
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 1.7e-72 277.3 400 42.5
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 3.7e-72 276.2 455 40.0
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 4.9e-72 275.8 427 40.5
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 8.3e-72 275.0 439 39.9
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 1.4e-71 274.2 436 39.9
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 1.4e-71 274.2 439 40.5
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 3.2e-71 273.1 430 40.7
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 9.2e-71 271.6 436 39.7
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 9.2e-71 271.6 456 38.4
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 9.2e-71 271.6 439 39.4
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 1.2e-70 271.2 436 41.5
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 2.1e-70 270.4 435 39.3
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 4.6e-70 269.2 431 39.7
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.3e-69 267.7 434 40.3
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 1.3e-69 267.7 435 38.2
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 1.7e-69 267.3 413 40.7
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 1.7e-69 267.3 435 39.8
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 3.9e-69 266.2 431 41.1
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 5.1e-69 265.8 430 40.5
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 6.6e-69 265.4 456 39.0
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 8.6e-69 265.0 405 39.8
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 8.6e-69 265.0 463 38.7
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 1.1e-68 264.6 434 40.8
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 1.5e-68 264.2 435 40.7
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 1.5e-68 264.2 455 39.6
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 1.9e-68 263.8 452 38.5
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 2.5e-68 263.5 462 38.5
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 2.5e-68 263.5 472 38.1
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 4.3e-68 262.7 400 41.0
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 5.6e-68 262.3 436 40.6
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 5.6e-68 262.3 445 39.1
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 7.3e-68 261.9 435 38.9
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 7.3e-68 261.9 435 40.5
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 7.3e-68 261.9 464 38.1
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 7.3e-68 261.9 426 39.0
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 9.5e-68 261.5 440 39.8
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 9.5e-68 261.5 447 39.1
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 1.2e-67 261.2 446 38.3
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 1.6e-67 260.8 428 38.8
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 2.1e-67 260.4 445 39.8
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 3.6e-67 259.6 445 39.6
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 4.7e-67 259.2 431 39.9
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.1e-66 258.1 443 38.6
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 2.3e-66 256.9 389 42.2
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 1.2e-65 254.6 395 40.5
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.5e-65 254.2 401 39.9
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 2.0e-65 253.8 414 39.4
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 5.8e-65 252.3 463 38.2
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 9.9e-65 251.5 439 38.3
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 1.3e-64 251.1 435 38.4
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 2.9e-64 250.0 421 40.4
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 2.9e-64 250.0 453 39.7
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 6.4e-64 248.8 441 38.5
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 1.9e-63 247.3 426 39.2
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 3.2e-63 246.5 441 38.5
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.7e-62 243.4 407 39.6
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 1.1e-58 231.5 403 38.7
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.2e-57 228.0 421 39.0
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.3e-56 224.6 433 36.7
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 1.7e-56 224.2 487 35.5
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.2e-56 223.8 226 62.8
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 2.4e-55 220.3 359 40.1
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 2.7e-54 216.9 416 37.3
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 6.2e-51 205.7 318 42.5
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 3.8e-48 196.4 363 35.8
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.2e-47 193.0 443 33.9
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 4.6e-46 189.5 335 39.7
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.0e-45 188.3 452 33.0
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 8.7e-45 185.3 375 33.3
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 3.3e-44 183.3 316 38.9
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 2.8e-43 180.3 383 34.7
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 3.1e-42 176.8 318 38.7
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 6.9e-42 175.6 308 38.0
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 9.3e-39 165.2 204 45.1
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 3.5e-38 163.3 209 44.5
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 6.0e-38 162.5 281 37.7
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 7.9e-38 162.2 171 55.0
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 5.1e-37 159.5 192 46.9
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 2.5e-36 157.1 168 54.8
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 1.6e-35 154.5 318 34.3
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 2.8e-35 153.7 300 35.3
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 1.8e-34 151.0 304 34.2
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 2.4e-34 150.6 287 37.3
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 3.9e-29 133.3 164 48.8
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 5.1e-29 132.9 168 46.4
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.5e-28 131.3 371 30.7
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 4.8e-27 126.3 173 45.1
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 2.0e-25 120.9 158 44.3
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 2.6e-25 120.6 143 49.7
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 4.2e-23 113.2 136 49.3
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 1.3e-21 108.2 163 41.7
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 3.0e-21 107.1 132 48.5
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 3.9e-21 106.7 118 50.8
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 6.9e-18 95.9 98 56.1
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 1.1e-15 88.6 114 49.1
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 2.5e-15 87.4 138 39.1
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 2.0e-12 77.8 144 33.3
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 2.5e-12 77.4 73 56.2
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 2.5e-07 60.8 53 52.8


User provided reference genes

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