Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015136 Vanilla planifolia HOM05D005705 ORTHO05D007152 4.5e-202 707.6 332 100.0
Lj1g0017194 Lotus japonicus HOM05D005705 ORTHO05D007152 3.1e-134 482.3 366 62.8
CiPaw.11G003500 Carya illinoinensis HOM05D005705 ORTHO05D007152 7.1e-131 471.1 374 61.8
Psat5g053040 Pisum sativum HOM05D005705 ORTHO05D007152 2.1e-130 469.5 367 61.0
Aqoxy3G01676 Aquilegia oxysepala HOM05D005705 ORTHO05D007152 3.5e-130 468.8 370 60.5
Atru.chr6.1874 Acer truncatum HOM05D005705 ORTHO05D007152 4.6e-130 468.4 372 61.0
GSVIVG01008591001 Vitis vinifera HOM05D005705 ORTHO05D007152 1.8e-129 466.5 371 60.4
VMungo1309G0782 Vigna mungo HOM05D005705 ORTHO05D007152 6.7e-129 464.5 366 60.1
Manes.06G123000 Manihot esculenta HOM05D005705 ORTHO05D007152 1.1e-128 463.8 371 59.8
Ca_16064_v3 Cicer arietinum L. HOM05D005705 ORTHO05D007152 3.3e-128 462.2 368 61.1
Glyma.06G167100 Glycine max HOM05D005705 ORTHO05D007152 3.3e-128 462.2 365 61.4
TWI14G0152 Tripterygium wilfordii HOM05D005705 ORTHO05D007152 3.3e-128 462.2 373 59.2
Dinv11204 Davidia involucrata HOM05D005705 ORTHO05D007152 4.3e-128 461.8 378 60.3
Zm00001eb241970 Zea mays HOM05D005705 ORTHO05D007152 9.6e-128 460.7 371 59.8
CsaV3_1G000320 Cucumis sativus L. HOM05D005705 ORTHO05D007152 3.7e-127 458.8 370 59.5
Nn4g22220 Nelumbo nucifera HOM05D005705 ORTHO05D007152 6.2e-127 458.0 372 60.2
Phvul.009G162600 Phaseolus vulgaris HOM05D005705 ORTHO05D007152 8.1e-127 457.6 366 60.1
Ciclev10031733m.g Citrus clementina HOM05D005705 ORTHO05D007152 2.4e-126 456.1 370 59.7
arahy.Tifrunner.gnm1.ann1.5ZS0BP Arachis hypogaea HOM05D005705 ORTHO05D007152 9.0e-126 454.1 371 59.6
Medtr3g098940 Medicago truncatula HOM05D005705 ORTHO05D007152 9.0e-126 454.1 367 59.7
CANSAT80G2532 Cannabis sativa HOM05D005705 ORTHO05D007152 4.5e-125 451.8 370 59.2
Lalb_Chr08g0237371 Lupinus albus HOM05D005705 ORTHO05D007152 5.8e-125 451.4 367 59.1
Potri.015G101300 Populus trichocarpa HOM05D005705 ORTHO05D007152 5.8e-125 451.4 371 58.2
Sabra15G0121700 Salix brachista HOM05D005705 ORTHO05D007152 7.6e-125 451.1 370 57.3
Eucgr.K02692 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.1e-123 447.2 371 57.7
RcHm_v2.0_Chr7g0189351 Rosa chinensis HOM05D005705 ORTHO05D007152 1.4e-123 446.8 371 58.0
Migut.D01284 Erythranthe guttata HOM05D005705 ORTHO05D007152 2.4e-123 446.0 366 57.9
Nitab4.5_0003383g0010 Nicotiana tabacum HOM05D005705 ORTHO05D007152 2.4e-123 446.0 376 58.2
Cc08_g11650 Coffea canephora HOM05D005705 ORTHO05D007152 5.5e-123 444.9 377 57.8
Nitab4.5_0001332g0070 Nicotiana tabacum HOM05D005705 ORTHO05D007152 7.1e-123 444.5 374 57.8
THA.LOC104811568 Tarenaya hassleriana HOM05D005705 ORTHO05D007152 7.1e-123 444.5 370 57.0
Eucgr.F01610 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.6e-122 443.4 372 57.0
Sopen03g028300 Solanum pennellii HOM05D005705 ORTHO05D007152 1.6e-122 443.4 373 57.9
Solyc03g097550.3 Solanum lycopersicum HOM05D005705 ORTHO05D007152 3.5e-122 442.2 373 57.6
Eucgr.B00082 Eucalyptus grandis HOM05D005705 ORTHO05D007152 4.6e-122 441.8 367 57.8
ClCG06G018130 Citrullus lanatus HOM05D005705 ORTHO05D007152 7.9e-122 441.0 371 58.5
ECA247G0704 Erigeron canadensis HOM05D005705 ORTHO05D007152 1.0e-121 440.7 374 58.3
Peaxi162Scf00516g00214 Petunia axillaris HOM05D005705 ORTHO05D007152 1.3e-121 440.3 376 56.9
PGR044G0296 Punica granatum HOM05D005705 ORTHO05D007152 2.3e-121 439.5 383 55.9
FAN13G0195 Fragaria x ananassa HOM05D005705 ORTHO05D007152 3.9e-121 438.7 378 56.9
Gorai.003G119300 Gossypium raimondii HOM05D005705 ORTHO05D007152 8.7e-121 437.6 371 56.1
FAN18G0862 Fragaria x ananassa HOM05D005705 ORTHO05D007152 1.5e-120 436.8 382 56.3
CAN.G732.1 Capsicum annuum HOM05D005705 ORTHO05D007152 2.5e-120 436.0 376 56.6
Gohir.D03G113100 Gossypium hirsutum HOM05D005705 ORTHO05D007152 4.3e-120 435.3 371 56.1
ATR0582G303 Amborella trichopoda HOM05D005705 ORTHO05D007152 7.4e-120 434.5 389 55.0
FAN08G2466 Fragaria x ananassa HOM05D005705 ORTHO05D007152 9.6e-120 434.1 385 55.6
DCAR_026236 Daucus carota HOM05D005705 ORTHO05D007152 1.3e-119 433.7 373 57.6
Lsat_1_v5_gn_1_32681 Lactuca sativa HOM05D005705 ORTHO05D007152 1.3e-119 433.7 375 58.1
arahy.Tifrunner.gnm1.ann1.U15GQW Arachis hypogaea HOM05D005705 ORTHO05D007152 1.6e-119 433.3 407 53.8
Thecc.03G135500 Theobroma cacao HOM05D005705 ORTHO05D007152 1.6e-119 433.3 371 56.6
MD14G1151500 Malus domestica HOM05D005705 ORTHO05D007152 1.4e-118 430.3 378 56.6
HanXRQChr02g0034161 Helianthus annuus HOM05D005705 ORTHO05D007152 2.4e-118 429.5 374 56.4
vmacro19145 Vaccinium macrocarpon HOM05D005705 ORTHO05D007152 1.5e-117 426.8 405 54.3
Aa31LG3G7650 Aethionema arabicum HOM05D005705 ORTHO05D007152 7.6e-117 424.5 385 55.3
TPR.G35256 Trifolium pratense HOM05D005705 ORTHO05D007152 2.2e-116 422.9 367 56.4
Duzib084G0308 Durio zibethinus HOM05D005705 ORTHO05D007152 1.1e-115 420.6 329 60.2
PSO017G1135 Papaver somniferum HOM05D005705 ORTHO05D007152 3.2e-115 419.1 369 55.0
MD06G1136700 Malus domestica HOM05D005705 ORTHO05D007152 4.2e-115 418.7 371 54.7
PSO478G3581 Papaver somniferum HOM05D005705 ORTHO05D007152 4.6e-114 415.2 368 55.2
Eucgr.B00079 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.0e-113 414.1 353 57.2
EL10Ac5g11353 Beta vulgaris HOM05D005705 ORTHO05D007152 2.5e-112 409.5 360 54.4
CSS0038740 Camellia sinensis var. sinensis HOM05D005705 ORTHO05D007152 5.7e-112 408.3 401 51.9
Sp6g13350 Schrenkiella parvula HOM05D005705 ORTHO05D007152 3.7e-111 405.6 370 54.1
AL8G25400 Arabidopsis lyrata HOM05D005705 ORTHO05D007152 4.8e-111 405.2 370 53.2
Prupe.5G146600 Prunus persica HOM05D005705 ORTHO05D007152 6.3e-111 404.8 372 54.3
BcaC01g06097 Brassica carinata HOM05D005705 ORTHO05D007152 1.1e-110 404.1 371 53.9
Thhalv10013761m.g Eutrema salsugineum HOM05D005705 ORTHO05D007152 1.8e-110 403.3 370 54.6
BraA03t10919Z Brassica rapa HOM05D005705 ORTHO05D007152 3.1e-110 402.5 371 54.4
Carub.0008s1118 Capsella rubella HOM05D005705 ORTHO05D007152 3.1e-110 402.5 369 53.9
C03p19170 Brassica napus HOM05D005705 ORTHO05D007152 6.9e-110 401.4 371 53.6
QL10p001835 Quercus lobata HOM05D005705 ORTHO05D007152 6.9e-110 401.4 506 43.9
CARHR256910 Cardamine hirsuta HOM05D005705 ORTHO05D007152 9.0e-110 401.0 370 52.7
BolC3t14305H Brassica oleracea HOM05D005705 ORTHO05D007152 2.6e-109 399.4 372 53.8
AT5G51140 Arabidopsis thaliana HOM05D005705 ORTHO05D007152 3.4e-109 399.1 370 52.4
BcaC01g06077 Brassica carinata HOM05D005705 ORTHO05D007152 5.9e-109 398.3 372 53.5
Rhsim08G0193700 Rhododendron simsii HOM05D005705 ORTHO05D007152 5.9e-109 398.3 350 57.1
ECA247G2912 Erigeron canadensis HOM05D005705 ORTHO05D007152 7.6e-109 397.9 373 54.7
A02p12470 Brassica napus HOM05D005705 ORTHO05D007152 1.0e-108 397.5 358 55.3
BolC2t08194H Brassica oleracea HOM05D005705 ORTHO05D007152 2.2e-108 396.4 359 55.4
Haze_07188 Corylus avellana HOM05D005705 ORTHO05D007152 5.0e-108 395.2 352 56.2
BraA02t06310Z Brassica rapa HOM05D005705 ORTHO05D007152 6.5e-108 394.8 358 54.7
A03p16280 Brassica napus HOM05D005705 ORTHO05D007152 8.5e-108 394.4 351 55.3
C02p20570 Brassica napus HOM05D005705 ORTHO05D007152 1.1e-107 394.0 358 55.0
BcaC03g14622 Brassica carinata HOM05D005705 ORTHO05D007152 5.5e-107 391.7 360 55.0
FAN04G2238 Fragaria x ananassa HOM05D005705 ORTHO05D007152 3.9e-105 385.6 414 49.3
Gohir.A03G053840 Gossypium hirsutum HOM05D005705 ORTHO05D007152 2.2e-103 379.8 381 50.7
Sed0013194 Sechium edule HOM05D005705 ORTHO05D007152 1.5e-101 373.6 363 54.8
Sc22g0003610 Simmondsia chinensis HOM05D005705 ORTHO05D007152 2.2e-100 369.8 362 52.5
Dinv23185 Davidia involucrata HOM05D005705 ORTHO05D007152 3.8e-100 369.0 221 76.0
TAR374G1739 Trochodendron aralioides HOM05D005705 ORTHO05D007152 5.0e-100 368.6 296 62.2
Actinidia18330 Actinidia chinensis HOM05D005705 ORTHO05D007152 1.0e-97 360.9 307 58.3
Lj5A92G46 Lonicera japonica HOM05D005705 ORTHO05D007152 1.7e-95 353.6 417 46.5
FvH4_5g08961 Fragaria vesca HOM05D005705 ORTHO05D007152 8.2e-95 351.3 221 72.4
Eucgr.K02689 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.1e-94 350.9 362 49.7
Pp3c10_5730 Physcomitrium patens HOM05D005705 ORTHO05D007152 1.1e-94 350.9 488 38.5
PGSC0003DMG400031733 Solanum tuberosum HOM05D005705 ORTHO05D007152 9.1e-94 347.8 220 72.7
Gohir.A03G053960 Gossypium hirsutum HOM05D005705 ORTHO05D007152 2.2e-92 343.2 221 68.8
Nn4g22223 Nelumbo nucifera HOM05D005705 ORTHO05D007152 1.4e-91 340.5 372 48.4
Oeu061128.1 Olea europaea HOM05D005705 ORTHO05D007152 4.2e-91 339.0 428 45.6
Mapoly0190s0007 Marchantia polymorpha HOM05D005705 ORTHO05D007152 9.4e-91 337.8 463 39.7
PGR083G0448 Punica granatum HOM05D005705 ORTHO05D007152 8.8e-89 331.3 372 47.0
Hma1.2p1_0168F.1_g074310 Hydrangea macrophylla HOM05D005705 ORTHO05D007152 1.7e-87 327.0 340 51.2
Eucgr.K02697 Eucalyptus grandis HOM05D005705 ORTHO05D007152 7.0e-86 321.6 391 44.5
AUR62034819 Chenopodium quinoa HOM05D005705 ORTHO05D007152 2.0e-85 320.1 371 43.9
AUR62029555 Chenopodium quinoa HOM05D005705 ORTHO05D007152 2.6e-85 319.7 371 43.7
SGA_v2.0_scaffold37G14637 Striga asiatica HOM05D005705 ORTHO05D007152 2.5e-83 313.2 373 44.2
MELO3C026185.2 Cucumis melo HOM05D005705 ORTHO05D007152 2.6e-80 303.1 310 51.0
Ah.11g046430 Amaranthus hybridus HOM05D005705 ORTHO05D007152 7.0e-78 295.0 411 40.4
MSTRG.4614 Avicennia marina HOM05D005705 ORTHO05D007152 9.4e-75 284.6 277 52.7
Cpa.g.sc4.149 Carica papaya HOM05D005705 ORTHO05D007152 1.6e-69 267.3 156 76.9
RcHm_v2.0_Chr7g0189401 Rosa chinensis HOM05D005705 ORTHO05D007152 1.2e-66 257.7 306 46.1
Os02g0512300 Oryza sativa ssp. japonica HOM05D005705 ORTHO05D007152 1.4e-57 227.6 130 77.7
Hund10107 Selenicereus undatus HOM05D005705 ORTHO05D007152 1.4e-54 217.6 319 38.2
CDE02G4520 Ceratophyllum demersum HOM05D005705 ORTHO05D007152 3.0e-52 209.9 233 48.9
MBI11_g13060_MAGBIO Magnolia biondii HOM05D005705 ORTHO05D007152 2.3e-49 200.3 125 72.0
Cfa023901 Carpinus fangiana HOM05D005705 ORTHO05D007152 1.2e-48 198.0 396 32.8
Pp3c10_5680 Physcomitrium patens HOM05D005705 ORTHO05D007152 1.7e-47 194.1 366 32.0
Cre17.g702400 Chlamydomonas reinhardtii HOM05D005705 ORTHO05D007152 6.0e-45 185.7 305 36.7
AagrBONN_evm.TU.Sc2ySwM_362.2453 Anthoceros agrestis HOM05D005705 ORTHO05D007152 1.3e-44 184.5 226 43.4
Haze_27069 Corylus avellana HOM05D005705 ORTHO05D007152 1.5e-40 171.0 263 38.0
Haze_26548 Corylus avellana HOM05D005705 ORTHO05D007152 5.4e-38 162.5 260 35.4
MCO02G106 Micromonas commoda HOM05D005705 ORTHO05D007152 1.6e-34 151.0 179 45.3
CBR_g48327 Chara braunii HOM05D005705 ORTHO05D007152 5.8e-32 142.5 177 44.1
Gohir.D03G113075 Gossypium hirsutum HOM05D005705 ORTHO05D007152 4.7e-26 122.9 115 52.2
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 1.3e-20 104.8 77 68.8
Cpa.g.sc4.145 Carica papaya HOM05D005705 ORTHO05D007152 5.1e-20 102.8 64 64.1
Eucgr.K02687 Eucalyptus grandis HOM05D005705 ORTHO05D007152 6.6e-20 102.4 93 49.5
arahy.Tifrunner.gnm1.ann1.MH3CCF Arachis hypogaea HOM05D001440 ORTHO05D007152 5.6e-19 99.4 88 56.8
arahy.Tifrunner.gnm1.ann1.N812UT Arachis hypogaea HOM05D005705 ORTHO05D007152 9.6e-19 98.6 64 71.9
arahy.Tifrunner.gnm1.ann1.WM01PM Arachis hypogaea HOM05D001440 ORTHO05D013218 3.6e-18 96.7 65 69.2
arahy.Tifrunner.gnm1.ann1.5M4P4Y Arachis hypogaea HOM05D005705 ORTHO05D007152 1.4e-17 94.7 64 70.3
arahy.Tifrunner.gnm1.ann1.DA2DAM Arachis hypogaea HOM05D005705 ORTHO05D007152 2.6e-16 90.5 64 67.2
AagrBONN_evm.TU.Sc2ySwM_368.1098 Anthoceros agrestis HOM05D005705 ORTHO05D007152 3.0e-12 77.0 48 72.9
MCO13G347 Micromonas commoda HOM05D005705 ORTHO05D007152 1.5e-11 74.7 319 24.5
Pp3s46_330 Physcomitrium patens HOM05D007020 ORTHO05D008935 8.1e-10 68.9 240 24.2
PSO384G4004 Papaver somniferum HOM05D006791 ORTHO05D008221 2.0e-08 64.3 270 22.6
VMungo0720G1069 Vigna mungo HOM05D006791 ORTHO05D008221 4.5e-08 63.2 277 21.7
Cpa.g.sc4.148 Carica papaya HOM05D005705 ORTHO05D007152 9.9e-08 62.0 43 58.1
PSO339G2849 Papaver somniferum HOM05D006791 ORTHO05D008221 1.7e-07 61.2 270 21.9
BraA03t13977Z Brassica rapa HOM05D006791 ORTHO05D008221 1.1e-06 58.5 129 27.9
BolC7t45202H Brassica oleracea HOM05D006791 ORTHO05D008221 1.9e-06 57.8 108 30.6
A03p48770 Brassica napus HOM05D006791 ORTHO05D008221 3.2e-06 57.0 129 27.1


User provided reference genes

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