Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014932 Vanilla planifolia HOM05D001092 ORTHO05D000923 1.1e-110 403.3 193 100.0
HPP92_014878 Vanilla planifolia HOM05D001092 ORTHO05D000923 1.7e-92 342.8 166 97.6
HPP92_014922 Vanilla planifolia HOM05D001092 ORTHO05D000923 2.3e-89 332.4 166 94.6
MD04G1057200 Malus domestica HOM05D001092 ORTHO05D000923 1.4e-65 253.4 174 68.4
Atru.chr9.1144 Acer truncatum HOM05D001092 ORTHO05D000923 2.0e-64 249.6 189 61.9
Dinv28897 Davidia involucrata HOM05D001092 ORTHO05D000923 3.3e-64 248.8 166 66.9
GSVIVG01013270001 Vitis vinifera HOM05D001092 ORTHO05D000923 1.1e-62 243.8 166 65.1
CANSAT21G2480 Cannabis sativa HOM05D001092 ORTHO05D000923 3.1e-62 242.3 166 66.3
MD06G1043800 Malus domestica HOM05D001092 ORTHO05D000923 4.1e-62 241.9 166 66.9
CiPaw.12G058300 Carya illinoinensis HOM05D001092 ORTHO05D000923 1.2e-61 240.4 166 66.3
FAN18G3751 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.2e-61 240.4 166 64.5
TWI60G0589 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 1.5e-61 240.0 166 66.3
FvH4_5g20820 Fragaria vesca HOM05D001092 ORTHO05D000923 2.0e-61 239.6 166 64.5
FAN08G1156 Fragaria x ananassa HOM05D001092 ORTHO05D000923 2.0e-61 239.6 166 64.5
Prupe.5G050700 Prunus persica HOM05D001092 ORTHO05D000923 2.6e-61 239.2 166 66.3
Cfa012359 Carpinus fangiana HOM05D001092 ORTHO05D000923 4.5e-61 238.4 166 63.9
RcHm_v2.0_Chr7g0207821 Rosa chinensis HOM05D001092 ORTHO05D000923 5.9e-61 238.0 166 65.1
FAN04G0578 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.0e-60 237.3 166 63.3
MBI04_g20743_MAGBIO Magnolia biondii HOM05D001092 ORTHO05D000923 1.0e-60 237.3 166 65.1
Aqoxy3G02588 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 1.3e-60 236.9 166 66.3
PSO063G3710 Papaver somniferum HOM05D001092 ORTHO05D000923 1.7e-60 236.5 166 64.5
Haze_08330 Corylus avellana HOM05D001092 ORTHO05D000923 3.8e-60 235.3 166 64.5
QL12p007950 Quercus lobata HOM05D001092 ORTHO05D000923 3.8e-60 235.3 166 63.9
Potri.001G148800 Populus trichocarpa HOM05D001092 ORTHO05D000923 5.0e-60 235.0 166 64.5
arahy.Tifrunner.gnm1.ann1.G3NGVJ Arachis hypogaea HOM05D001092 ORTHO05D000923 6.5e-60 234.6 166 64.5
arahy.Tifrunner.gnm1.ann1.PHJ2IJ Arachis hypogaea HOM05D001092 ORTHO05D000923 6.5e-60 234.6 166 64.5
Actinidia25929 Actinidia chinensis HOM05D001092 ORTHO05D000923 2.5e-59 232.6 166 64.5
Ciclev10018424m.g Citrus clementina HOM05D001092 ORTHO05D000923 2.5e-59 232.6 166 64.5
Manes.17G019783 Manihot esculenta HOM05D001092 ORTHO05D000923 4.2e-59 231.9 166 63.9
Thecc.03G236900 Theobroma cacao HOM05D001092 ORTHO05D000923 4.2e-59 231.9 166 63.9
PGR031G0629 Punica granatum HOM05D001092 ORTHO05D000923 7.2e-59 231.1 166 65.1
Sabra01G0118800 Salix brachista HOM05D001092 ORTHO05D000923 7.2e-59 231.1 166 64.5
AT4G17140 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 1.6e-58 229.9 166 65.1
Glyma.11G039900 Glycine max HOM05D001092 ORTHO05D000923 1.6e-58 229.9 166 62.7
Medtr5g013780 Medicago truncatula HOM05D001092 ORTHO05D000923 1.6e-58 229.9 166 62.0
Cpa.g.sc98.46 Carica papaya HOM05D001092 ORTHO05D000923 2.1e-58 229.6 165 63.6
Nn1g00699 Nelumbo nucifera HOM05D001092 ORTHO05D000923 2.7e-58 229.2 167 63.5
Gohir.A03G003300 Gossypium hirsutum HOM05D001092 ORTHO05D000923 3.6e-58 228.8 166 62.7
Gohir.A08G161600 Gossypium hirsutum HOM05D001092 ORTHO05D000923 3.6e-58 228.8 166 63.3
Gohir.D08G181600 Gossypium hirsutum HOM05D001092 ORTHO05D000923 3.6e-58 228.8 166 63.3
Gorai.004G190500 Gossypium raimondii HOM05D001092 ORTHO05D000923 3.6e-58 228.8 166 63.3
Lj2g0026983 Lotus japonicus HOM05D001092 ORTHO05D000923 4.7e-58 228.4 166 62.7
Cc08_g01550 Coffea canephora HOM05D001092 ORTHO05D000923 8.0e-58 227.6 166 65.1
Psat2g175240 Pisum sativum HOM05D001092 ORTHO05D000923 1.0e-57 227.3 166 62.0
Ca_26022_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 1.4e-57 226.9 166 61.4
Phvul.002G003000 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 1.4e-57 226.9 166 62.7
AL7G37590 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 3.0e-57 225.7 166 63.3
Peaxi162Scf00084g00118 Petunia axillaris HOM05D001092 ORTHO05D000923 3.0e-57 225.7 166 62.0
TPR.G33938 Trifolium pratense HOM05D001092 ORTHO05D000923 3.0e-57 225.7 166 62.0
Thhalv10024176m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 3.9e-57 225.3 166 63.3
Gohir.D03G169100 Gossypium hirsutum HOM05D001092 ORTHO05D000923 3.9e-57 225.3 166 61.4
Gorai.003G179200 Gossypium raimondii HOM05D001092 ORTHO05D000923 3.9e-57 225.3 166 61.4
VMungo1215G1951 Vigna mungo HOM05D001092 ORTHO05D000923 3.9e-57 225.3 166 62.0
Aa31LG2G13220 Aethionema arabicum HOM05D001092 ORTHO05D000923 5.2e-57 224.9 166 62.0
CAN.G1445.6 Capsicum annuum HOM05D001092 ORTHO05D000923 6.7e-57 224.6 166 63.9
Lsat_1_v5_gn_3_15901 Lactuca sativa HOM05D001092 ORTHO05D000923 6.7e-57 224.6 166 60.8
Sopen08g026080 Solanum pennellii HOM05D001092 ORTHO05D000923 6.7e-57 224.6 171 61.4
ATR0829G162 Amborella trichopoda HOM05D001092 ORTHO05D000923 8.8e-57 224.2 167 61.1
DCAR_000729 Daucus carota HOM05D001092 ORTHO05D000923 8.8e-57 224.2 166 60.8
Duzib205G0058 Durio zibethinus HOM05D001092 ORTHO05D000923 8.8e-57 224.2 166 60.2
EL10Ac5g12216 Beta vulgaris HOM05D001092 ORTHO05D000923 2.0e-56 223.0 166 60.8
Lalb_Chr16g0379281 Lupinus albus HOM05D001092 ORTHO05D000923 2.6e-56 222.6 166 61.4
Sp7g17050 Schrenkiella parvula HOM05D001092 ORTHO05D000923 2.6e-56 222.6 166 62.7
Solyc08g077500.4 Solanum lycopersicum HOM05D001092 ORTHO05D000923 3.3e-56 222.2 171 60.2
MSTRG.1961 Avicennia marina HOM05D001092 ORTHO05D000923 5.7e-56 221.5 166 62.7
ECA246G3294 Erigeron canadensis HOM05D001092 ORTHO05D000923 5.7e-56 221.5 166 61.4
THA.LOC104814451 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 7.4e-56 221.1 166 61.4
Carub.0007s2427 Capsella rubella HOM05D001092 ORTHO05D000923 9.7e-56 220.7 166 63.3
HanXRQChr17g0535661 Helianthus annuus HOM05D001092 ORTHO05D000923 2.2e-55 219.5 166 60.8
CARHR223710 Cardamine hirsuta HOM05D001092 ORTHO05D000923 6.3e-55 218.0 166 60.8
unitig_21.g20375 Utricularia gibba HOM05D001092 ORTHO05D000923 1.4e-54 216.9 166 59.6
Sc07g0009000 Simmondsia chinensis HOM05D001092 ORTHO05D000923 3.1e-54 215.7 166 58.4
Migut.E00810 Erythranthe guttata HOM05D001092 ORTHO05D000923 4.1e-54 215.3 191 56.0
ClCG09G012520 Citrullus lanatus HOM05D001092 ORTHO05D000923 9.1e-54 214.2 166 58.4
Eucgr.D02142 Eucalyptus grandis HOM05D001092 ORTHO05D000923 1.2e-53 213.8 166 61.4
BolC8t48437H Brassica oleracea HOM05D001092 ORTHO05D000923 5.9e-53 211.5 166 60.2
BraA08t33273Z Brassica rapa HOM05D001092 ORTHO05D000923 5.9e-53 211.5 166 60.2
Ah.12g053800 Amaranthus hybridus HOM05D001092 ORTHO05D000923 1.3e-52 210.3 166 59.6
CsaV3_3G049680 Cucumis sativus L. HOM05D001092 ORTHO05D000923 3.8e-52 208.8 166 57.8
MELO3C003359.2 Cucumis melo HOM05D001092 ORTHO05D000923 8.5e-52 207.6 166 57.8
Sed0007068 Sechium edule HOM05D001092 ORTHO05D000923 4.2e-51 205.3 173 54.3
AUR62007201 Chenopodium quinoa HOM05D001092 ORTHO05D000923 9.4e-51 204.1 167 58.1
AUR62018801 Chenopodium quinoa HOM05D001092 ORTHO05D000923 1.6e-50 203.4 167 58.1
SEGI_02242 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 3.6e-50 202.2 166 54.2
Zm00001eb390790 Zea mays HOM05D001092 ORTHO05D000923 4.7e-50 201.8 166 54.8
MBI14_g25463_MAGBIO Magnolia biondii HOM05D001092 ORTHO05D000923 1.4e-46 190.3 140 63.6
SGA_v2.0_scaffold20G09243 Striga asiatica HOM05D001092 ORTHO05D000923 1.6e-45 186.8 165 55.8
CDE02G4159 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 4.5e-45 185.3 184 48.9
SHI07571 Sapria himalayana HOM05D001092 ORTHO05D000923 1.4e-41 173.7 165 50.3
Lj2A251G48 Lonicera japonica HOM05D001092 ORTHO05D000923 2.0e-37 159.8 111 63.1
Oeu007576.1 Olea europaea HOM05D001092 ORTHO05D000923 7.2e-35 151.4 110 62.7
AagrBONN_evm.TU.Sc2ySwM_362.876 Anthoceros agrestis HOM05D001092 ORTHO05D000923 1.4e-33 147.1 167 44.3
Rhsim11G0008400 Rhododendron simsii HOM05D001092 ORTHO05D000923 2.3e-33 146.4 125 56.8
Mapoly0105s0039 Marchantia polymorpha HOM05D001092 ORTHO05D000923 8.9e-33 144.4 173 41.6
PGSC0003DMG400029806 Solanum tuberosum HOM05D001092 ORTHO05D000923 1.2e-29 134.0 114 54.4
Pp3c22_21110 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.1e-27 127.5 168 38.1
Pp3c18_1370 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.1e-22 110.9 168 35.1
Pp3c18_1376 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.1e-22 110.9 168 35.1
SMO240G0011 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 1.4e-22 110.5 166 36.1
SMO340G0042 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 1.4e-22 110.5 166 36.1
AagrBONN_evm.TU.Sc2ySwM_362.1818 Anthoceros agrestis HOM05D001092 ORTHO05D000923 1.1e-19 100.9 166 33.1
Mapoly0076s0036 Marchantia polymorpha HOM05D001092 ORTHO05D000923 2.5e-19 99.8 180 32.2
SEGI_28116 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 5.6e-19 98.6 166 31.3
SEGI_33370 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 5.6e-19 98.6 166 31.3
CDE02G1757 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 1.6e-18 97.1 167 31.7
Pp3c9_20320 Physcomitrium patens HOM05D001092 ORTHO05D000923 2.8e-18 96.3 177 31.1
QL06p013490 Quercus lobata HOM05D001092 ORTHO05D000923 2.8e-18 96.3 166 30.7
HanXRQChr10g0319871 Helianthus annuus HOM05D001092 ORTHO05D000923 1.1e-17 94.4 147 33.3
SalBow8G3461 Salvia bowleyana HOM05D001092 ORTHO05D000923 2.3e-17 93.2 162 30.2
Nn2g14501 Nelumbo nucifera HOM05D001092 ORTHO05D000923 3.1e-17 92.8 166 29.5
TWI73G1237 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 3.4e-16 89.4 167 30.5
Nn2g14503 Nelumbo nucifera HOM05D001092 ORTHO05D000923 4.4e-16 89.0 166 28.3
Rhsim11G0008500 Rhododendron simsii HOM05D001092 ORTHO05D000923 2.2e-15 86.7 55 67.3
Sc03g0001750 Simmondsia chinensis HOM05D001092 ORTHO05D000923 2.9e-15 86.3 167 31.1
Nitab4.5_0006135g0030 Nicotiana tabacum HOM05D001092 ORTHO05D000923 1.4e-14 84.0 56 67.9
Nitab4.5_0001255g0080 Nicotiana tabacum HOM05D001092 ORTHO05D000923 4.1e-14 82.4 56 66.1
A08p12900 Brassica napus HOM05D001092 ORTHO05D000923 7.1e-14 81.6 69 53.6
CBR_g4878 Chara braunii HOM05D001092 ORTHO05D000923 1.3e-12 77.4 176 26.1
TAR629G2120 Trochodendron aralioides HOM05D001092 ORTHO05D000923 1.9e-11 73.6 40 75.0
CSS0003551 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.2e-08 64.3 56 53.6
Cc09_g07240 Coffea canephora HOM05D000128 ORTHO05D000923 4.4e-08 62.4 71 50.7


User provided reference genes

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