Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014799 Vanilla planifolia HOM05D005566 ORTHO05D007534 1.4e-207 726.1 368 100.0
HPP92_014800 Vanilla planifolia HOM05D005566 ORTHO05D007534 2.3e-175 619.0 370 86.5
CDE05G3632 Ceratophyllum demersum HOM05D005566 ORTHO05D007534 3.6e-35 153.3 348 37.1
CDE08G0014 Ceratophyllum demersum HOM05D005566 ORTHO05D007534 9.9e-33 145.2 345 36.2
GSVIVG01019806001 Vitis vinifera HOM05D005566 ORTHO05D007534 3.5e-30 136.7 326 33.4
Nn6g33532 Nelumbo nucifera HOM05D005566 ORTHO05D007534 6.6e-29 132.5 206 41.7
Manes.02G024200 Manihot esculenta HOM05D005566 ORTHO05D007534 1.6e-27 127.9 339 33.6
Ah.12g057290 Amaranthus hybridus HOM05D005566 ORTHO05D007534 2.8e-27 127.1 372 32.3
CSS0044378 Camellia sinensis var. sinensis HOM05D005566 ORTHO05D007534 1.1e-26 125.2 288 36.8
Sopen08g003840 Solanum pennellii HOM05D005566 ORTHO05D007534 1.1e-26 125.2 196 38.8
Solyc08g007950.3 Solanum lycopersicum HOM05D005566 ORTHO05D007534 3.1e-26 123.6 195 39.0
Lalb_Chr09g0333291 Lupinus albus HOM05D005566 ORTHO05D007534 1.2e-25 121.7 181 40.3
FAN04G1912 Fragaria x ananassa HOM05D005566 ORTHO05D007534 1.5e-25 121.3 236 36.0
FAN18G1004 Fragaria x ananassa HOM05D005566 ORTHO05D007534 1.5e-25 121.3 245 35.1
EL10Ac5g12770 Beta vulgaris HOM05D005566 ORTHO05D007534 2.0e-25 120.9 223 37.2
FvH4_5g01950 Fragaria vesca HOM05D005566 ORTHO05D007534 2.0e-25 120.9 236 35.6
COL.COLO4_34426 Corchorus olitorius HOM05D005566 ORTHO05D007534 2.6e-25 120.6 355 29.0
Thecc.03G275300 Theobroma cacao HOM05D005566 ORTHO05D007534 2.6e-25 120.6 367 29.4
VMungo0251G1600 Vigna mungo HOM05D005566 ORTHO05D007534 4.5e-25 119.8 216 38.4
CAN.G792.89 Capsicum annuum HOM05D005566 ORTHO05D007534 5.8e-25 119.4 179 41.9
Haze_08893 Corylus avellana HOM05D005566 ORTHO05D007534 5.8e-25 119.4 199 38.7
MD06G1077900 Malus domestica HOM05D005566 ORTHO05D007534 5.8e-25 119.4 250 35.2
CANSAT21G2631 Cannabis sativa HOM05D005566 ORTHO05D007534 7.6e-25 119.0 396 29.5
ClCG01G002940 Citrullus lanatus HOM05D005566 ORTHO05D007534 7.6e-25 119.0 360 30.3
Potri.003G124200 Populus trichocarpa HOM05D005566 ORTHO05D007534 9.9e-25 118.6 211 38.4
Cfa012142 Carpinus fangiana HOM05D005566 ORTHO05D007534 1.3e-24 118.2 199 38.2
Lj4g0021136 Lotus japonicus HOM05D005566 ORTHO05D007534 1.3e-24 118.2 180 41.1
MELO3C005651.2 Cucumis melo HOM05D005566 ORTHO05D007534 1.7e-24 117.9 363 29.8
FAN13G1151 Fragaria x ananassa HOM05D005566 ORTHO05D007534 3.8e-24 116.7 236 35.2
Sed0016580 Sechium edule HOM05D005566 ORTHO05D007534 3.8e-24 116.7 320 30.0
Ciclev10024399m.g Citrus clementina HOM05D005566 ORTHO05D007534 4.9e-24 116.3 189 38.6
Eucgr.D01874 Eucalyptus grandis HOM05D005566 ORTHO05D007534 4.9e-24 116.3 377 30.5
Peaxi162Scf00102g01550 Petunia axillaris HOM05D005566 ORTHO05D007534 4.9e-24 116.3 210 38.1
Cc08_g14350 Coffea canephora HOM05D005566 ORTHO05D007534 6.4e-24 115.9 381 29.1
CsaV3_5G003020 Cucumis sativus L. HOM05D005566 ORTHO05D007534 8.4e-24 115.5 355 29.3
Duzib084G0536 Durio zibethinus HOM05D005566 ORTHO05D007534 1.1e-23 115.2 354 29.4
ATR0680G084 Amborella trichopoda HOM05D005566 ORTHO05D007534 1.9e-23 114.4 293 33.1
Glyma.08G012600 Glycine max HOM05D005566 ORTHO05D007534 1.9e-23 114.4 239 36.0
TAR629G1018 Trochodendron aralioides HOM05D005566 ORTHO05D007534 1.9e-23 114.4 404 29.7
RcHm_v2.0_Chr7g0198431 Rosa chinensis HOM05D005566 ORTHO05D007534 2.4e-23 114.0 234 33.3
Dinv38972 Davidia involucrata HOM05D005566 ORTHO05D007534 3.2e-23 113.6 388 29.9
Gohir.A12G226600 Gossypium hirsutum HOM05D005566 ORTHO05D007534 3.2e-23 113.6 363 29.2
Cpa.g.sc76.21 Carica papaya HOM05D005566 ORTHO05D007534 4.2e-23 113.2 371 30.5
Phvul.002G287600 Phaseolus vulgaris HOM05D005566 ORTHO05D007534 4.2e-23 113.2 181 41.4
AL1G24430 Arabidopsis lyrata HOM05D005566 ORTHO05D007534 5.4e-23 112.8 199 37.7
Aa31LG1G1950 Aethionema arabicum HOM05D005566 ORTHO05D007534 9.3e-23 112.1 196 36.7
Sp1g11360 Schrenkiella parvula HOM05D005566 ORTHO05D007534 9.3e-23 112.1 224 35.7
Atru.chr9.204 Acer truncatum HOM05D005566 ORTHO05D007534 1.2e-22 111.7 338 30.2
PGR031G0987 Punica granatum HOM05D005566 ORTHO05D007534 1.2e-22 111.7 215 35.3
Thhalv10006889m.g Eutrema salsugineum HOM05D005566 ORTHO05D007534 1.6e-22 111.3 192 38.0
MSTRG.11999 Avicennia marina HOM05D005566 ORTHO05D007534 2.7e-22 110.5 351 28.5
SalBow5G3774 Salvia bowleyana HOM05D005566 ORTHO05D007534 3.5e-22 110.2 218 36.2
THA.LOC104809401 Tarenaya hassleriana HOM05D005566 ORTHO05D007534 3.5e-22 110.2 192 35.9
Gorai.008G245200 Gossypium raimondii HOM05D005566 ORTHO05D007534 6.0e-22 109.4 364 29.4
CARHR013110 Cardamine hirsuta HOM05D005566 ORTHO05D007534 7.9e-22 109.0 212 36.3
Ca_17550_v3 Cicer arietinum L. HOM05D005566 ORTHO05D007534 7.9e-22 109.0 243 34.6
Gohir.D12G229000 Gossypium hirsutum HOM05D005566 ORTHO05D007534 7.9e-22 109.0 353 30.3
Sabra03G0087800 Salix brachista HOM05D005566 ORTHO05D007534 7.9e-22 109.0 382 29.6
Nitab4.5_0001200g0190 Nicotiana tabacum HOM05D005566 ORTHO05D007534 1.0e-21 108.6 210 35.7
AT1G12800 Arabidopsis thaliana HOM05D005566 ORTHO05D007534 1.8e-21 107.8 227 36.6
Carub.0001s1252 Capsella rubella HOM05D005566 ORTHO05D007534 3.0e-21 107.1 189 37.0
QL12p018066 Quercus lobata HOM05D005566 ORTHO05D007534 3.0e-21 107.1 193 38.3
Prupe.5G095700 Prunus persica HOM05D005566 ORTHO05D007534 5.1e-21 106.3 353 28.3
TPR.G12738 Trifolium pratense HOM05D005566 ORTHO05D007534 5.1e-21 106.3 205 37.1
A06p08880 Brassica napus HOM05D005566 ORTHO05D007534 6.7e-21 105.9 187 38.5
Duzib205G0430 Durio zibethinus HOM05D005566 ORTHO05D007534 6.7e-21 105.9 185 36.2
unitig_744.g24358 Utricularia gibba HOM05D005566 ORTHO05D007534 1.5e-20 104.8 210 35.7
Glyma.05G205700 Glycine max HOM05D005566 ORTHO05D007534 1.9e-20 104.4 180 37.2
Actinidia02022 Actinidia chinensis HOM05D005566 ORTHO05D007534 3.3e-20 103.6 385 28.6
SGA_v2.0_scaffold253G45116 Striga asiatica HOM05D005566 ORTHO05D007534 3.3e-20 103.6 380 26.6
Medtr8g097290 Medicago truncatula HOM05D005566 ORTHO05D007534 5.6e-20 102.8 187 37.4
BcaC05g25155 Brassica carinata HOM05D005566 ORTHO05D007534 9.6e-20 102.1 189 38.6
SalBow6G1897 Salvia bowleyana HOM05D005566 ORTHO05D007534 1.3e-19 101.7 256 31.2
Sc22g0000210 Simmondsia chinensis HOM05D005566 ORTHO05D007534 1.3e-19 101.7 285 32.3
Psat7g035520 Pisum sativum HOM05D005566 ORTHO05D007534 1.6e-19 101.3 183 38.3
TWI81G0928 Tripterygium wilfordii HOM05D005566 ORTHO05D007534 4.8e-19 99.8 361 26.6
AUR62010607 Chenopodium quinoa HOM05D005566 ORTHO05D007534 6.2e-19 99.4 244 32.4
DCAR_008409 Daucus carota HOM05D005566 ORTHO05D007534 8.1e-19 99.0 213 36.2
Hund11490 Selenicereus undatus HOM05D005566 ORTHO05D007534 1.4e-18 98.2 181 35.9
MD14G1098700 Malus domestica HOM05D005566 ORTHO05D007534 1.8e-18 97.8 197 34.5
Oeu049553.1 Olea europaea HOM05D005566 ORTHO05D007534 4.0e-18 96.7 274 28.8
PSO063G1293 Papaver somniferum HOM05D005566 ORTHO05D007534 5.3e-18 96.3 217 32.7
arahy.Tifrunner.gnm1.ann1.8RU08H Arachis hypogaea HOM05D005566 ORTHO05D007534 3.4e-17 93.6 339 29.2
PSO782G1537 Papaver somniferum HOM05D005566 ORTHO05D007534 9.9e-17 92.0 285 29.1
BcaC05g25112 Brassica carinata HOM05D005566 ORTHO05D007534 1.7e-16 91.3 88 53.4
AUR62017248 Chenopodium quinoa HOM05D005566 ORTHO05D007534 2.2e-16 90.9 281 30.2
arahy.Tifrunner.gnm1.ann1.H32RIC Arachis hypogaea HOM05D005566 ORTHO05D007534 2.9e-16 90.5 339 28.9
C05p10500 Brassica napus HOM05D005566 ORTHO05D007534 6.4e-16 89.4 182 34.1
BolC5t29796H Brassica oleracea HOM05D005566 ORTHO05D007534 6.4e-16 89.4 182 34.1
BraA06t24082Z Brassica rapa HOM05D005566 ORTHO05D007534 8.4e-16 89.0 60 65.0
Rhsim02G0223600 Rhododendron simsii HOM05D005566 ORTHO05D007534 1.4e-15 88.2 197 34.5
Migut.A00792 Erythranthe guttata HOM05D005566 ORTHO05D007534 1.9e-15 87.8 400 25.2
Lj2A187T86 Lonicera japonica HOM05D005566 ORTHO05D007534 3.2e-15 87.0 179 34.1
Lsat_1_v5_gn_6_5820 Lactuca sativa HOM05D005566 ORTHO05D007534 1.6e-14 84.7 261 28.7
Zm00001eb229900 Zea mays HOM05D005566 ORTHO05D007534 2.1e-14 84.3 100 48.0
Actinidia14546 Actinidia chinensis HOM05D005566 ORTHO05D007534 1.8e-13 81.3 116 41.4
MBI17_g08175_MAGBIO Magnolia biondii HOM05D005566 ORTHO05D004184 1.8e-13 81.3 310 27.7
HanXRQChr02g0048911 Helianthus annuus HOM05D005566 ORTHO05D007534 3.0e-13 80.5 226 30.5
Os02g0115600 Oryza sativa ssp. japonica HOM05D005566 ORTHO05D007534 4.3e-12 76.6 104 44.2
ECA233G6007 Erigeron canadensis HOM05D005566 ORTHO05D007534 7.4e-12 75.9 221 30.3
Aqoxy5G04022 Aquilegia oxysepala HOM05D005566 ORTHO05D007534 1.6e-11 74.7 46 73.9
FAN08G2943 Fragaria x ananassa HOM05D005566 ORTHO05D007534 3.7e-11 73.6 262 27.9
CiPaw.12G095300 Carya illinoinensis HOM05D005566 ORTHO05D007534 9.0e-10 68.9 149 34.2
Hma1.2p1_1943F.1_g308460 Hydrangea macrophylla HOM05D005566 ORTHO05D007534 7.6e-09 65.9 223 30.5
Lsat_1_v5_gn_3_7621 Lactuca sativa HOM05D005566 ORTHO05D007534 3.8e-08 63.5 67 40.3
DCAR_004649 Daucus carota HOM05D005566 ORTHO05D007534 8.4e-08 62.4 187 27.3
Nitab4.5_0004032g0020 Nicotiana tabacum HOM05D005566 ORTHO05D007534 7.1e-07 59.3 208 26.9


User provided reference genes

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