Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014748 Vanilla planifolia HOM05D005670 ORTHO05D007612 3.0e-204 714.9 347 100.0
HPP92_014737 Vanilla planifolia HOM05D005670 ORTHO05D007612 3.7e-114 415.6 227 89.4
TAR626G1957 Trochodendron aralioides HOM05D005670 ORTHO05D007612 7.8e-88 328.2 231 67.1
Zm00001eb433900 Zea mays HOM05D005670 ORTHO05D007612 9.5e-86 321.2 227 66.5
MBI18_g16998_MAGBIO Magnolia biondii HOM05D005670 ORTHO05D007612 5.2e-84 315.5 207 69.1
CSS0005949 Camellia sinensis var. sinensis HOM05D005670 ORTHO05D007612 8.9e-84 314.7 207 69.6
ATR0680G385 Amborella trichopoda HOM05D005670 ORTHO05D007612 7.5e-83 311.6 231 63.6
QL05p039856 Quercus lobata HOM05D005670 ORTHO05D007612 2.2e-82 310.1 207 68.1
Aqoxy1G02519 Aquilegia oxysepala HOM05D005670 ORTHO05D007612 2.9e-82 309.7 207 68.1
PSO675G5775 Papaver somniferum HOM05D005670 ORTHO05D007612 6.4e-82 308.5 231 62.3
Ciclev10014972m.g Citrus clementina HOM05D005670 ORTHO05D007612 1.4e-81 307.4 230 62.6
FAN11G1478 Fragaria x ananassa HOM05D005670 ORTHO05D007612 1.4e-81 307.4 240 59.6
CDE09G0528 Ceratophyllum demersum HOM05D005670 ORTHO05D007612 3.2e-81 306.2 225 62.2
unitig_22.g6763 Utricularia gibba HOM05D005670 ORTHO05D007612 3.2e-81 306.2 203 70.0
Eucgr.E03319 Eucalyptus grandis HOM05D005670 ORTHO05D007612 4.1e-81 305.8 201 69.7
Nn1g06587 Nelumbo nucifera HOM05D005670 ORTHO05D007612 4.1e-81 305.8 207 67.1
Lj1A1206G64 Lonicera japonica HOM05D005670 ORTHO05D007612 5.4e-81 305.4 207 66.7
Cpa.g.sc27.55 Carica papaya HOM05D005670 ORTHO05D007612 7.1e-81 305.1 231 62.3
Nitab4.5_0005954g0030 Nicotiana tabacum HOM05D005670 ORTHO05D007612 7.1e-81 305.1 231 62.8
Sabra04G0025900 Salix brachista HOM05D005670 ORTHO05D007612 7.1e-81 305.1 207 67.6
SGA_v2.0_scaffold22G09723 Striga asiatica HOM05D005670 ORTHO05D007612 9.2e-81 304.7 207 68.1
CiPaw.09G058400 Carya illinoinensis HOM05D005670 ORTHO05D007612 1.2e-80 304.3 207 65.2
COL.COLO4_31493 Corchorus olitorius HOM05D005670 ORTHO05D008858 1.2e-80 304.3 207 67.6
Gohir.A10G024800 Gossypium hirsutum HOM05D005670 ORTHO05D007612 1.6e-80 303.9 231 61.9
Gohir.D10G025500 Gossypium hirsutum HOM05D005670 ORTHO05D007612 2.1e-80 303.5 231 61.5
Gorai.011G026800 Gossypium raimondii HOM05D005670 ORTHO05D007612 2.1e-80 303.5 231 61.5
Haze_06486 Corylus avellana HOM05D005670 ORTHO05D007612 3.5e-80 302.8 207 66.2
CAN.G1164.15 Capsicum annuum HOM05D005670 ORTHO05D007612 6.0e-80 302.0 207 66.7
Cc02_g13200 Coffea canephora HOM05D005670 ORTHO05D007612 7.8e-80 301.6 203 68.5
Potri.004G041800 Populus trichocarpa HOM05D005670 ORTHO05D007612 1.0e-79 301.2 207 67.1
MD00G1095000 Malus domestica HOM05D005670 ORTHO05D007612 1.3e-79 300.8 207 65.2
PGSC0003DMG400022386 Solanum tuberosum HOM05D005670 ORTHO05D007612 1.3e-79 300.8 207 66.7
Prupe.4G045000 Prunus persica HOM05D005670 ORTHO05D007612 1.7e-79 300.4 206 67.5
A09p25930 Brassica napus HOM05D005670 ORTHO05D007612 3.0e-79 299.7 231 60.2
BraA09t38162Z Brassica rapa HOM05D005670 ORTHO05D007612 3.0e-79 299.7 231 60.2
Peaxi162Scf00947g00005 Petunia axillaris HOM05D005670 ORTHO05D007612 3.0e-79 299.7 207 67.1
MSTRG.7329 Avicennia marina HOM05D005670 ORTHO05D007612 3.9e-79 299.3 207 66.2
MD05G1314100 Malus domestica HOM05D005670 ORTHO05D007612 3.9e-79 299.3 207 66.2
Nitab4.5_0002158g0080 Nicotiana tabacum HOM05D005670 ORTHO05D007612 3.9e-79 299.3 231 62.3
Sopen02g023260 Solanum pennellii HOM05D005670 ORTHO05D007612 3.9e-79 299.3 207 66.2
Thecc.06G189700 Theobroma cacao HOM05D005670 ORTHO05D007612 3.9e-79 299.3 231 61.0
HanXRQChr04g0124101 Helianthus annuus HOM05D005670 ORTHO05D007612 5.1e-79 298.9 207 68.1
Solyc02g078400.3 Solanum lycopersicum HOM05D005670 ORTHO05D007612 5.1e-79 298.9 207 66.2
AT4G04955 Arabidopsis thaliana HOM05D005670 ORTHO05D007612 6.6e-79 298.5 207 65.2
ECA236G2993 Erigeron canadensis HOM05D005670 ORTHO05D007612 6.6e-79 298.5 231 62.3
AL6G48490 Arabidopsis lyrata HOM05D005670 ORTHO05D007612 8.6e-79 298.1 207 65.7
AUR62016994 Chenopodium quinoa HOM05D005670 ORTHO05D007612 1.1e-78 297.7 231 59.7
Lsat_1_v5_gn_7_18941 Lactuca sativa HOM05D005670 ORTHO05D007612 1.1e-78 297.7 231 62.3
Rhsim02G0128200 Rhododendron simsii HOM05D005670 ORTHO05D007612 1.1e-78 297.7 207 65.2
THA.LOC104806286 Tarenaya hassleriana HOM05D005670 ORTHO05D007612 1.1e-78 297.7 207 65.2
Sp6g04000 Schrenkiella parvula HOM05D005670 ORTHO05D007612 1.5e-78 297.4 207 64.3
BcaC04g21352 Brassica carinata HOM05D005670 ORTHO05D007612 1.9e-78 297.0 207 64.7
C09p32840 Brassica napus HOM05D005670 ORTHO05D007612 1.9e-78 297.0 207 64.7
BolC9t56124H Brassica oleracea HOM05D005670 ORTHO05D007612 1.9e-78 297.0 207 64.7
BcaB01g01850 Brassica carinata HOM05D005670 ORTHO05D007612 2.5e-78 296.6 207 65.2
Duzib192G0381 Durio zibethinus HOM05D005670 ORTHO05D007612 2.5e-78 296.6 231 61.0
PGR042G2793 Punica granatum HOM05D005670 ORTHO05D007612 3.3e-78 296.2 201 66.2
DCAR_004080 Daucus carota HOM05D005670 ORTHO05D007612 4.3e-78 295.8 207 65.2
Thhalv10028578m.g Eutrema salsugineum HOM05D005670 ORTHO05D007612 4.3e-78 295.8 207 64.7
Carub.0006s3289 Capsella rubella HOM05D005670 ORTHO05D007612 7.3e-78 295.0 207 64.7
Hund23715 Selenicereus undatus HOM05D005670 ORTHO05D007612 9.5e-78 294.7 207 64.7
Glyma.15G072900 Glycine max HOM05D005670 ORTHO05D007612 1.6e-77 293.9 202 65.8
Manes.16G026300 Manihot esculenta HOM05D005670 ORTHO05D007612 1.6e-77 293.9 207 66.7
CANSAT35G0124 Cannabis sativa HOM05D005670 ORTHO05D007612 2.1e-77 293.5 207 66.2
RcHm_v2.0_Chr5g0008181 Rosa chinensis HOM05D005670 ORTHO05D007612 2.8e-77 293.1 208 63.5
Atru.chr10.1904 Acer truncatum HOM05D005670 ORTHO05D007612 3.6e-77 292.7 203 63.5
CARHR252570 Cardamine hirsuta HOM05D005670 ORTHO05D007612 3.6e-77 292.7 206 64.1
Glyma.13G240600 Glycine max HOM05D005670 ORTHO05D007612 4.7e-77 292.4 206 64.1
TWI38G1891 Tripterygium wilfordii HOM05D005670 ORTHO05D007612 4.7e-77 292.4 231 60.2
FAN21G0121 Fragaria x ananassa HOM05D005670 ORTHO05D007612 6.2e-77 292.0 207 63.8
Aa31LG9G9510 Aethionema arabicum HOM05D005670 ORTHO05D007612 8.1e-77 291.6 214 63.6
FvH4_3g09410 Fragaria vesca HOM05D005670 ORTHO05D007612 1.4e-76 290.8 207 63.8
Sed0013715 Sechium edule HOM05D005670 ORTHO05D007612 1.4e-76 290.8 207 64.7
THA.LOC104812854 Tarenaya hassleriana HOM05D005670 ORTHO05D007612 1.8e-76 290.4 207 64.7
Glyma.15G073000 Glycine max HOM05D005670 ORTHO05D007612 3.1e-76 289.7 207 62.8
Sc05g0007760 Simmondsia chinensis HOM05D005670 ORTHO05D007612 3.1e-76 289.7 207 64.3
ClCG03G005950 Citrullus lanatus HOM05D005670 ORTHO05D007612 1.2e-75 287.7 207 63.3
EL10Ac8g20366 Beta vulgaris HOM05D005670 ORTHO05D007612 1.5e-75 287.3 231 58.9
Glyma.13G240500 Glycine max HOM05D005670 ORTHO05D007612 2.0e-75 287.0 207 61.8
FAN16G2869 Fragaria x ananassa HOM05D005670 ORTHO05D007612 2.6e-75 286.6 207 63.3
Medtr2g013060 Medicago truncatula HOM05D005670 ORTHO05D007612 3.4e-75 286.2 207 62.8
AUR62014803 Chenopodium quinoa HOM05D005670 ORTHO05D007612 5.8e-75 285.4 231 58.9
Psat1g206560 Pisum sativum HOM05D005670 ORTHO05D007612 1.3e-74 284.3 208 62.0
CsaV3_1G012190 Cucumis sativus L. HOM05D005670 ORTHO05D007612 2.2e-74 283.5 214 61.2
Lj6g0007385 Lotus japonicus HOM05D005670 ORTHO05D007612 2.2e-74 283.5 207 63.3
VMungo0540G1414 Vigna mungo HOM05D005670 ORTHO05D007612 2.9e-74 283.1 203 61.6
VMungo0540G1652 Vigna mungo HOM05D005670 ORTHO05D007612 3.7e-74 282.7 206 63.1
Ca_00305_v3 Cicer arietinum L. HOM05D005670 ORTHO05D007612 6.4e-74 282.0 207 62.3
TPR.G36745 Trifolium pratense HOM05D005670 ORTHO05D007612 6.4e-74 282.0 207 61.8
Lalb_Chr15g0089871 Lupinus albus HOM05D005670 ORTHO05D007612 1.1e-73 281.2 207 63.3
Phvul.006G186800 Phaseolus vulgaris HOM05D005670 ORTHO05D007612 1.1e-73 281.2 206 62.6
Phvul.006G186700 Phaseolus vulgaris HOM05D005670 ORTHO05D007612 1.4e-73 280.8 231 57.6
Sed0017986 Sechium edule HOM05D005670 ORTHO05D007612 1.3e-71 274.2 207 60.9
Mapoly0068s0105 Marchantia polymorpha HOM05D005670 ORTHO05D007612 1.7e-71 273.9 225 55.1
Mapoly0156s0028 Marchantia polymorpha HOM05D005670 ORTHO05D007612 1.7e-71 273.9 225 55.1
arahy.Tifrunner.gnm1.ann1.RER6EK Arachis hypogaea HOM05D005670 ORTHO05D007612 1.1e-68 264.6 194 63.9
SMO145G0108 Selaginella moellendorffii HOM05D005670 ORTHO05D007612 1.8e-68 263.8 233 54.1
MELO3C002593.2 Cucumis melo HOM05D005670 ORTHO05D007612 7.6e-67 258.5 258 51.2
arahy.Tifrunner.gnm1.ann1.06VRVW Arachis hypogaea HOM05D005670 ORTHO05D007612 1.7e-66 257.3 190 63.7
Pp3c2_7120 Physcomitrium patens HOM05D005670 ORTHO05D007612 5.4e-65 252.3 228 51.8
CBR_g34175 Chara braunii HOM05D005670 ORTHO05D007612 2.3e-63 246.9 205 58.0
Pp3c14_11050 Physcomitrium patens HOM05D005670 ORTHO05D007612 2.3e-63 246.9 200 54.5
Ah.09g237260 Amaranthus hybridus HOM05D005670 ORTHO05D007612 9.6e-62 241.5 231 51.1
Migut.M01152 Erythranthe guttata HOM05D005670 ORTHO05D007612 2.8e-61 240.0 231 51.9
AagrBONN_evm.TU.Sc2ySwM_344.2129 Anthoceros agrestis HOM05D005670 ORTHO05D007612 2.9e-58 229.9 215 52.6
MCO09G610 Micromonas commoda HOM05D005670 ORTHO05D007612 1.4e-52 211.1 190 53.2
Pp3c17_10590 Physcomitrium patens HOM05D005670 ORTHO05D007612 4.0e-52 209.5 171 55.6
vmacro15902 Vaccinium macrocarpon HOM05D005670 ORTHO05D007612 7.1e-49 198.7 137 68.6
FAN08G0180 Fragaria x ananassa HOM05D005670 ORTHO05D007612 1.3e-42 177.9 200 46.5
FAN18G0055 Fragaria x ananassa HOM05D005670 ORTHO05D007612 3.2e-41 173.3 134 59.0
FvH4_5g20980 Fragaria vesca HOM05D005670 ORTHO05D007612 1.3e-39 167.9 128 59.4
Cre13.g592050 Chlamydomonas reinhardtii HOM05D005670 ORTHO05D007612 1.1e-38 164.9 240 40.8
Zm00001eb137210 Zea mays HOM05D005670 ORTHO05D007612 7.4e-38 162.2 148 54.1
Cfa026875 Carpinus fangiana HOM05D005670 ORTHO05D007612 4.2e-33 146.4 216 37.5
PRCOL_00001419 Prasinoderma coloniale HOM05D005670 ORTHO05D007612 9.7e-30 135.2 198 40.4
Zm00001eb374970 Zea mays HOM05D005670 ORTHO05D007612 1.3e-29 134.8 183 39.3
Duzib235G0954 Durio zibethinus HOM05D005670 ORTHO05D007612 6.3e-29 132.5 170 42.9
Pp3s42_40 Physcomitrium patens HOM05D004829 ORTHO05D034576 6.9e-28 129.0 204 32.8
Dinv07547 Davidia involucrata HOM05D005670 ORTHO05D007612 2.9e-26 123.6 70 77.1
Eucgr.E03116 Eucalyptus grandis HOM05D005670 ORTHO05D007612 4.1e-20 103.2 73 60.3
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 1.1e-14 85.1 171 33.3
Haze_26731 Corylus avellana HOM05D004351 ORTHO05D005196 9.7e-14 82.0 174 28.7
Actinidia25619 Actinidia chinensis HOM05D005670 ORTHO05D007612 6.3e-13 79.3 64 62.5
Actinidia39456 Actinidia chinensis HOM05D005670 ORTHO05D007612 6.3e-13 79.3 64 62.5
Rhsim04G0080800 Rhododendron simsii HOM05D000001 ORTHO05D000003 7.0e-12 75.9 82 48.8
MCO02G098 Micromonas commoda HOM05D004351 ORTHO05D005196 4.7e-08 63.2 174 24.1
Lj2C622G21 Lonicera japonica HOM05D004351 ORTHO05D005196 3.3e-06 57.0 174 23.0


User provided reference genes

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