Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014635 Vanilla planifolia HOM05D004392 ORTHO05D004846 5.6e-311 1070.1 544 100.0
MBI12_g11801_MAGBIO Magnolia biondii HOM05D004392 ORTHO05D004846 4.9e-153 545.4 551 54.3
TAR629G2483 Trochodendron aralioides HOM05D004392 ORTHO05D004846 1.1e-149 534.3 546 54.2
Nn3g18803 Nelumbo nucifera HOM05D004392 ORTHO05D004846 1.1e-144 517.7 553 52.4
QL08p047226 Quercus lobata HOM05D004392 ORTHO05D004846 3.0e-142 509.6 546 52.9
GSVIVG01027438001 Vitis vinifera HOM05D004392 ORTHO05D004846 3.0e-142 509.6 544 52.2
Hund27149 Selenicereus undatus HOM05D004392 ORTHO05D004846 5.0e-142 508.8 543 53.6
Aqoxy5G04345 Aquilegia oxysepala HOM05D004392 ORTHO05D004846 2.5e-141 506.5 548 49.8
Zm00001eb230740 Zea mays HOM05D004392 ORTHO05D004846 2.3e-139 500.0 547 50.5
Cfa003736 Carpinus fangiana HOM05D004392 ORTHO05D004846 8.9e-139 498.0 545 51.6
Atru.chr5.766 Acer truncatum HOM05D004392 ORTHO05D004846 7.5e-138 495.0 552 50.9
Dinv34257 Davidia involucrata HOM05D004392 ORTHO05D004846 7.5e-138 495.0 545 50.5
Haze_15733 Corylus avellana HOM05D004392 ORTHO05D004846 1.3e-137 494.2 552 50.9
Actinidia08006 Actinidia chinensis HOM05D004392 ORTHO05D004846 2.2e-137 493.4 553 50.1
Cpa.g.sc193.10 Carica papaya HOM05D004392 ORTHO05D004846 4.9e-137 492.3 540 50.7
CiPaw.01G082300 Carya illinoinensis HOM05D004392 ORTHO05D004846 4.9e-137 492.3 547 50.5
AUR62004560 Chenopodium quinoa HOM05D004392 ORTHO05D004846 2.1e-135 486.9 547 52.7
Rhsim07G0000300 Rhododendron simsii HOM05D004392 ORTHO05D004846 2.7e-135 486.5 545 50.3
Manes.01G240000 Manihot esculenta HOM05D004392 ORTHO05D004846 6.0e-135 485.3 545 50.1
ATR0304G014 Amborella trichopoda HOM05D004392 ORTHO05D004846 7.8e-135 485.0 552 49.6
CSS0004566 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 1.3e-134 484.2 545 49.9
Ciclev10018449m.g Citrus clementina HOM05D004392 ORTHO05D004846 1.3e-134 484.2 543 50.5
Sc01g0002200 Simmondsia chinensis HOM05D004392 ORTHO05D004846 1.3e-134 484.2 556 49.5
CSS0009785 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 1.1e-133 481.1 545 49.7
Duzib138G1478 Durio zibethinus HOM05D004392 ORTHO05D004846 5.6e-133 478.8 544 48.7
Ah.05g178970 Amaranthus hybridus HOM05D004392 ORTHO05D004846 9.5e-133 478.0 544 50.2
TWI59G0442 Tripterygium wilfordii HOM05D004392 ORTHO05D004846 9.5e-133 478.0 544 49.3
PSO063G6286 Papaver somniferum HOM05D004392 ORTHO05D004846 1.6e-132 477.2 543 50.1
Potri.014G105601 Populus trichocarpa HOM05D004392 ORTHO05D004846 2.8e-132 476.5 548 48.7
CDE02G2120 Ceratophyllum demersum HOM05D004392 ORTHO05D004846 1.8e-131 473.8 546 48.5
Thecc.01G333400 Theobroma cacao HOM05D004392 ORTHO05D004846 1.8e-131 473.8 544 48.5
Prupe.2G197500 Prunus persica HOM05D004392 ORTHO05D004846 3.1e-131 473.0 541 50.5
PSO782G2296 Papaver somniferum HOM05D004392 ORTHO05D004846 6.8e-131 471.9 543 49.9
COL.COLO4_23048 Corchorus olitorius HOM05D004392 ORTHO05D004846 1.5e-130 470.7 544 48.7
Sabra14G0077700 Salix brachista HOM05D004392 ORTHO05D004846 1.3e-129 467.6 548 48.0
MD07G1159400 Malus domestica HOM05D004392 ORTHO05D004846 6.4e-129 465.3 544 49.3
AUR62022676 Chenopodium quinoa HOM05D004392 ORTHO05D004846 8.3e-129 464.9 548 51.3
Gohir.A12G116600 Gossypium hirsutum HOM05D004392 ORTHO05D004846 2.4e-128 463.4 546 47.4
Hma1.2p1_0074F.1_g038710 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 4.1e-128 462.6 549 48.1
PGR031G1055 Punica granatum HOM05D004392 ORTHO05D004846 1.6e-127 460.7 543 47.5
Gorai.008G130800 Gossypium raimondii HOM05D004392 ORTHO05D004846 7.8e-127 458.4 546 47.1
THA.LOC104801349 Tarenaya hassleriana HOM05D004392 ORTHO05D004846 7.8e-127 458.4 544 46.1
Lj9C607G8 Lonicera japonica HOM05D004392 ORTHO05D004846 1.3e-126 457.6 572 46.9
AL6G52660 Arabidopsis lyrata HOM05D004392 ORTHO05D004846 1.7e-126 457.2 546 47.6
RcHm_v2.0_Chr1g0361071 Rosa chinensis HOM05D004392 ORTHO05D004846 2.3e-126 456.8 547 48.1
Gohir.D12G120100 Gossypium hirsutum HOM05D004392 ORTHO05D004846 1.5e-125 454.1 546 46.9
FvH4_7g17640 Fragaria vesca HOM05D004392 ORTHO05D004846 1.9e-125 453.8 553 48.1
FAN06G0296 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.9e-125 453.8 553 48.1
BcaC04g24098 Brassica carinata HOM05D004392 ORTHO05D004846 4.3e-125 452.6 547 46.1
C09p01080 Brassica napus HOM05D004392 ORTHO05D004846 4.3e-125 452.6 547 46.1
CARHR249530 Cardamine hirsuta HOM05D004392 ORTHO05D004846 4.3e-125 452.6 541 46.8
Aa31LG5G1150 Aethionema arabicum HOM05D004392 ORTHO05D004846 7.3e-125 451.8 546 46.9
Thhalv10028358m.g Eutrema salsugineum HOM05D004392 ORTHO05D004846 1.2e-124 451.1 546 46.0
MSTRG.17382 Avicennia marina HOM05D004392 ORTHO05D004846 1.6e-124 450.7 553 46.8
BolC9t53041H Brassica oleracea HOM05D004392 ORTHO05D004846 2.1e-124 450.3 547 46.1
FAN06G0139 Fragaria x ananassa HOM05D004392 ORTHO05D004846 2.1e-124 450.3 553 47.9
Eucgr.D02650 Eucalyptus grandis HOM05D004392 ORTHO05D004846 2.8e-124 449.9 544 47.8
FAN10G3859 Fragaria x ananassa HOM05D004392 ORTHO05D004846 2.8e-124 449.9 553 47.9
Sp6g01320 Schrenkiella parvula HOM05D004392 ORTHO05D004846 3.6e-124 449.5 550 46.4
FAN10G1489 Fragaria x ananassa HOM05D004392 ORTHO05D004846 6.2e-124 448.7 553 47.6
arahy.Tifrunner.gnm1.ann1.9PW2R5 Arachis hypogaea HOM05D004392 ORTHO05D004846 1.1e-123 448.0 541 47.7
FAN01G0919 Fragaria x ananassa HOM05D004392 ORTHO05D004846 2.4e-123 446.8 545 47.9
Lalb_Chr10g0100861 Lupinus albus HOM05D004392 ORTHO05D004846 3.1e-123 446.4 555 47.7
EL10Ac1g00187 Beta vulgaris HOM05D004392 ORTHO05D004846 4.0e-123 446.0 607 45.1
BcaB01g02315 Brassica carinata HOM05D004392 ORTHO05D004846 4.0e-123 446.0 548 46.2
AT4G00800 Arabidopsis thaliana HOM05D004392 ORTHO05D004846 6.8e-123 445.3 541 46.8
CsaV3_3G007340 Cucumis sativus L. HOM05D004392 ORTHO05D004846 8.9e-123 444.9 548 46.5
FAN03G2506 Fragaria x ananassa HOM05D004392 ORTHO05D004846 8.9e-123 444.9 545 47.7
Lj3g0000602 Lotus japonicus HOM05D004392 ORTHO05D004846 8.9e-123 444.9 548 47.6
Carub.0006s3583 Capsella rubella HOM05D004392 ORTHO05D004846 2.0e-122 443.7 544 46.3
A09p00990 Brassica napus HOM05D004392 ORTHO05D004846 5.8e-122 442.2 548 45.8
BraA09t35770Z Brassica rapa HOM05D004392 ORTHO05D004846 7.6e-122 441.8 547 45.7
Cc02_g39950 Coffea canephora HOM05D004392 ORTHO05D004846 7.6e-122 441.8 553 45.2
arahy.Tifrunner.gnm1.ann1.H04KSL Arachis hypogaea HOM05D004392 ORTHO05D004846 9.9e-122 441.4 545 47.3
Medtr8g024320 Medicago truncatula HOM05D004392 ORTHO05D004846 1.7e-121 440.7 547 47.0
Sed0010760 Sechium edule HOM05D004392 ORTHO05D004846 8.4e-121 438.3 559 46.0
TAR636G2848 Trochodendron aralioides HOM05D004392 ORTHO05D004846 2.4e-120 436.8 550 46.0
DCAR_013954 Daucus carota HOM05D004392 ORTHO05D004846 3.2e-120 436.4 548 45.3
TPR.G19826 Trifolium pratense HOM05D004392 ORTHO05D004846 5.4e-120 435.6 542 46.7
Phvul.010G119400 Phaseolus vulgaris HOM05D004392 ORTHO05D004846 9.3e-120 434.9 553 46.5
Glyma.16G018400 Glycine max HOM05D004392 ORTHO05D004846 1.6e-119 434.1 551 46.8
Psat4g164000 Pisum sativum HOM05D004392 ORTHO05D004846 2.1e-119 433.7 546 47.4
SalBow3G3735 Salvia bowleyana HOM05D004392 ORTHO05D004846 2.7e-119 433.3 549 45.0
VMungo0331G0990 Vigna mungo HOM05D004392 ORTHO05D004846 4.6e-119 432.6 542 46.5
Nitab4.5_0000006g0150 Nicotiana tabacum HOM05D004392 ORTHO05D004846 1.3e-118 431.0 547 45.7
vmacro00027 Vaccinium macrocarpon HOM05D004392 ORTHO05D004846 1.3e-118 431.0 541 46.8
Ca_26063_v3 Cicer arietinum L. HOM05D004392 ORTHO05D004846 1.7e-118 430.6 547 46.6
SGA_v2.0_scaffold98G29423 Striga asiatica HOM05D004392 ORTHO05D004846 3.0e-118 429.9 543 44.9
Peaxi162Scf00462g00512 Petunia axillaris HOM05D004392 ORTHO05D004846 3.9e-118 429.5 543 45.3
Glyma.07G049700 Glycine max HOM05D004392 ORTHO05D004846 1.9e-117 427.2 543 46.8
Nitab4.5_0011074g0010 Nicotiana tabacum HOM05D004392 ORTHO05D004846 4.3e-117 426.0 543 45.1
Lsat_1_v5_gn_3_140700 Lactuca sativa HOM05D004392 ORTHO05D004846 5.6e-117 425.6 538 44.4
Migut.B01921 Erythranthe guttata HOM05D004392 ORTHO05D004846 7.3e-117 425.2 546 45.2
Sopen05g026910 Solanum pennellii HOM05D004392 ORTHO05D004846 4.8e-116 422.5 544 44.9
CAN.G929.34 Capsicum annuum HOM05D004392 ORTHO05D004846 1.1e-115 421.4 540 45.4
Solyc05g044610.3 Solanum lycopersicum HOM05D004392 ORTHO05D004846 1.8e-115 420.6 544 44.9
ClCG05G000190 Citrullus lanatus HOM05D004392 ORTHO05D004846 1.5e-114 417.5 548 44.7
HanXRQChr11g0352941 Helianthus annuus HOM05D004392 ORTHO05D004846 9.9e-114 414.8 535 45.2
HanXRQChr11g0352951 Helianthus annuus HOM05D004392 ORTHO05D004846 9.9e-114 414.8 535 45.2
Oeu028215.3 Olea europaea HOM05D004392 ORTHO05D004846 7.1e-112 408.7 491 48.3
MELO3C005953.2 Cucumis melo HOM05D004392 ORTHO05D004846 4.6e-111 406.0 545 44.8
ECA233G3878 Erigeron canadensis HOM05D004392 ORTHO05D004846 2.5e-109 400.2 542 43.0
SEGI_29076 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 1.6e-108 397.5 551 42.5
SalBow3G1181 Salvia bowleyana HOM05D004392 ORTHO05D004846 2.1e-108 397.1 549 42.8
Mapoly0063s0095 Marchantia polymorpha HOM05D004392 ORTHO05D004846 1.5e-85 321.2 568 35.7
AagrBONN_evm.TU.Sc2ySwM_368.256 Anthoceros agrestis HOM05D004392 ORTHO05D004846 4.6e-79 299.7 551 35.9
QL10p065016 Quercus lobata HOM05D004392 ORTHO05D004846 1.5e-77 294.7 359 51.0
Pp3c17_2710 Physcomitrium patens HOM05D004392 ORTHO05D004846 2.8e-76 290.4 568 35.6
SMO114G0120 Selaginella moellendorffii HOM05D004392 ORTHO05D004846 8.8e-70 268.9 541 34.2
Os02g0124700 Oryza sativa ssp. japonica HOM05D004392 ORTHO05D004846 4.4e-69 266.5 238 57.1
Pp3c7_20800 Physcomitrium patens HOM05D004392 ORTHO05D004846 3.1e-67 260.4 558 34.4
Hma1.2p1_0074F.1_g038720 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 1.5e-61 241.5 242 50.0
SEGI_11710 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 2.8e-52 210.7 232 49.1
unitig_736.g22806 Utricularia gibba HOM05D004392 ORTHO05D004846 1.0e-49 202.2 323 41.8
Cc06_g21290 Coffea canephora HOM05D004392 ORTHO05D004846 1.3e-49 201.8 416 33.7
SHI29617 Sapria himalayana HOM05D004392 ORTHO05D004846 2.1e-47 194.5 385 37.7
CAN.G929.33 Capsicum annuum HOM05D004392 ORTHO05D004846 1.0e-46 192.2 775 26.8
CBR_g34692 Chara braunii HOM05D004392 ORTHO05D004846 1.6e-42 178.3 674 25.2
Cc00_g18720 Coffea canephora HOM05D004392 ORTHO05D004846 3.3e-40 170.6 218 41.7
CAN.G1674.1 Capsicum annuum HOM05D004392 ORTHO05D004846 6.1e-39 166.4 540 30.0
QL10p065024 Quercus lobata HOM05D004392 ORTHO05D004846 7.0e-35 152.9 134 56.0
Psat3g193680 Pisum sativum HOM05D003463 ORTHO05D030491 2.1e-31 141.4 140 50.0
Cc08_g08700 Coffea canephora HOM05D004392 ORTHO05D004846 4.9e-28 130.2 160 41.2
Cc05_g02700 Coffea canephora HOM05D004392 ORTHO05D004846 3.2e-27 127.5 180 38.9
Cc00_g21570 Coffea canephora HOM05D004392 ORTHO05D004846 4.1e-27 127.1 159 40.9
Cc07_g19980 Coffea canephora HOM05D004392 ORTHO05D004846 1.2e-23 115.5 165 38.2
Nitab4.5_0002816g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 3.7e-20 104.0 124 46.8
Lsat_1_v5_gn_7_90420 Lactuca sativa HOM05D004392 ORTHO05D004846 1.1e-11 75.9 220 30.5
Cc00_g33390 Coffea canephora HOM05D004392 ORTHO05D004846 1.4e-11 75.5 52 61.5
Psat0s3706g0080 Pisum sativum HOM05D004392 ORTHO05D004846 4.3e-08 63.9 161 34.8


User provided reference genes

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