Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.0e-211 738.8 362 100.0
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.6e-189 666.0 359 87.5
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 4.5e-163 578.2 352 75.9
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 5.9e-163 577.8 351 76.1
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 5.0e-162 574.7 362 75.4
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 8.5e-162 573.9 351 75.2
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 1.1e-161 573.5 351 75.8
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 1.1e-161 573.5 350 76.3
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.9e-161 572.8 351 75.2
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 2.5e-161 572.4 351 75.5
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 3.2e-161 572.0 350 75.4
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 4.2e-161 571.6 351 75.5
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 5.5e-161 571.2 361 74.2
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 5.5e-161 571.2 356 75.3
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 2.1e-160 569.3 351 75.2
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 2.7e-160 568.9 350 74.3
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 6.1e-160 567.8 351 75.8
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 7.9e-160 567.4 351 75.2
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 1.0e-159 567.0 351 75.8
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.4e-159 566.6 351 74.9
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 1.4e-159 566.6 361 73.7
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 2.3e-159 565.8 351 74.4
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 3.0e-159 565.5 350 74.6
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 5.2e-159 564.7 373 71.8
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 5.2e-159 564.7 362 73.2
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 6.7e-159 564.3 350 74.3
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 8.8e-159 563.9 351 73.2
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 1.5e-158 563.1 361 73.7
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 2.0e-158 562.8 359 73.3
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.0e-158 562.8 351 73.2
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 2.6e-158 562.4 352 73.6
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 5.7e-158 561.2 355 73.0
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 9.7e-158 560.5 352 73.9
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.3e-157 560.1 365 71.8
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 1.7e-157 559.7 363 72.7
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 2.2e-157 559.3 356 72.8
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 2.8e-157 558.9 361 73.1
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 2.8e-157 558.9 354 73.2
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 3.7e-157 558.5 362 71.5
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 4.8e-157 558.1 353 73.9
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 4.8e-157 558.1 350 75.1
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 4.8e-157 558.1 350 75.1
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 4.8e-157 558.1 351 74.6
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 6.3e-157 557.8 353 74.2
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 6.3e-157 557.8 353 74.2
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 6.3e-157 557.8 359 72.7
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 1.4e-156 556.6 347 74.6
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 1.4e-156 556.6 351 73.5
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.8e-156 556.2 365 72.6
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 2.4e-156 555.8 363 72.7
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.1e-156 555.4 351 72.4
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 5.3e-156 554.7 355 72.1
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 5.3e-156 554.7 355 73.0
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 5.3e-156 554.7 350 74.3
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 7.0e-156 554.3 352 73.3
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 7.0e-156 554.3 352 73.9
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 1.6e-155 553.1 352 73.3
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 2.0e-155 552.7 352 73.3
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 3.5e-155 552.0 350 73.7
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 5.9e-155 551.2 352 73.3
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 7.7e-155 550.8 350 72.6
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.0e-154 550.4 350 72.0
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 1.0e-154 550.4 350 73.4
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 1.3e-154 550.1 355 72.7
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 1.3e-154 550.1 353 72.2
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 1.3e-154 550.1 347 74.4
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 1.7e-154 549.7 353 73.7
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.7e-154 549.7 352 72.4
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 5.0e-154 548.1 350 71.4
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 5.0e-154 548.1 368 69.6
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 1.9e-153 546.2 352 73.0
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 1.9e-153 546.2 370 69.5
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 2.5e-153 545.8 359 70.5
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 3.2e-153 545.4 363 70.2
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 4.2e-153 545.0 362 70.2
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 5.5e-153 544.7 373 70.2
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 5.5e-153 544.7 366 71.3
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 5.5e-153 544.7 351 72.9
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 7.2e-153 544.3 347 72.0
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 9.4e-153 543.9 359 72.7
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 9.4e-153 543.9 370 71.6
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.2e-152 543.5 347 72.0
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 1.6e-152 543.1 370 70.3
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.6e-152 543.1 353 72.8
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 1.6e-152 543.1 363 69.7
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.6e-152 543.1 359 72.7
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 2.1e-152 542.7 355 70.4
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 3.6e-152 542.0 365 69.3
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 6.1e-152 541.2 370 69.2
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 1.4e-151 540.0 347 72.6
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 4.0e-151 538.5 357 70.9
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 4.0e-151 538.5 352 73.3
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 4.0e-151 538.5 347 71.8
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 5.2e-151 538.1 367 69.2
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 8.8e-151 537.3 348 73.9
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.2e-150 537.0 367 70.6
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 2.6e-150 535.8 360 69.7
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 3.3e-150 535.4 332 73.8
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 7.5e-150 534.3 357 71.7
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.3e-149 533.5 375 67.2
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 1.7e-149 533.1 348 73.9
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 2.2e-149 532.7 351 70.1
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 1.1e-148 530.4 367 68.9
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 9.1e-148 527.3 366 68.9
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 7.7e-147 524.2 366 69.4
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.0e-146 523.9 350 70.3
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 1.3e-146 523.5 355 71.8
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 3.6e-144 515.4 348 70.4
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.0e-143 512.3 351 67.8
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 3.0e-143 512.3 356 67.7
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 6.8e-143 511.1 349 67.9
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.0e-142 509.6 331 70.4
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 1.7e-141 506.5 350 68.3
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 1.7e-141 506.5 386 64.0
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 1.7e-141 506.5 332 71.1
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 2.4e-140 502.7 342 66.7
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 3.1e-140 502.3 344 70.3
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 3.1e-140 502.3 360 66.1
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.2e-137 492.3 351 65.8
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 9.5e-137 490.7 296 75.3
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.2e-136 490.3 355 67.0
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 8.0e-136 487.6 355 66.2
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.0e-135 487.3 364 63.2
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.8e-132 476.5 290 74.1
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 5.4e-132 474.9 436 55.3
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 9.2e-132 474.2 350 64.3
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 3.5e-131 472.2 353 64.6
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 6.6e-130 468.0 364 64.3
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 8.6e-130 467.6 331 66.8
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.9e-129 466.5 277 76.9
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 4.9e-125 451.8 315 67.6
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 8.3e-125 451.1 351 63.0
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 4.6e-123 445.3 331 62.5
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 8.6e-114 414.5 238 79.0
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 9.5e-113 411.0 362 58.3
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 1.2e-110 404.1 351 55.3
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 1.1e-108 397.5 710 35.8
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 7.1e-100 368.2 259 66.0
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 7.8e-99 364.8 333 55.0
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 4.7e-96 355.5 234 70.5
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.2e-92 342.4 331 53.2
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 7.1e-92 341.7 233 67.4
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 2.3e-82 310.1 227 64.3
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 1.6e-72 277.3 202 64.9
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 5.3e-71 272.3 291 50.5
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 3.4e-46 189.9 142 63.4
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 1.5e-41 174.5 100 81.0
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.8e-40 170.2 165 52.7
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 6.3e-40 169.1 123 67.5
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 8.2e-40 168.7 116 73.3
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 1.1e-39 168.3 123 66.7
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 1.4e-39 167.9 123 66.7
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 1.7e-37 161.0 122 63.9
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 8.5e-37 158.7 95 78.9
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.4e-34 151.4 123 61.0
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.3e-34 150.6 98 67.3
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 8.8e-34 148.7 107 67.3
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 4.5e-30 136.3 117 65.0
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 2.9e-29 133.7 126 53.2
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 3.8e-21 106.7 69 71.0
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 5.0e-21 106.3 64 78.1
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 6.5e-21 105.9 64 76.6
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 8.6e-21 105.5 67 76.1
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 4.5e-14 83.2 84 50.0
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.4e-10 71.6 124 38.7
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.4e-10 71.6 49 65.3
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 5.2e-10 69.7 56 62.5
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.1e-07 62.0 71 50.7
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 3.2e-07 60.5 58 55.2


User provided reference genes

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