Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014401 Vanilla planifolia HOM05D004632 ORTHO05D005556 1.6e-259 899.4 657 100.0
Nn8g39852 Nelumbo nucifera HOM05D004632 ORTHO05D005556 1.3e-181 640.6 662 78.5
GSVIVG01035887001 Vitis vinifera HOM05D004632 ORTHO05D005556 4.0e-178 629.0 675 77.8
Aqoxy7G03810 Aquilegia oxysepala HOM05D004632 ORTHO05D005556 3.4e-177 625.9 667 78.0
Dinv34967 Davidia involucrata HOM05D004632 ORTHO05D005556 3.8e-176 622.5 672 77.2
Rhsim02G0214000 Rhododendron simsii HOM05D004632 ORTHO05D005556 6.4e-176 621.7 669 78.0
CSS0008139 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 2.1e-174 616.7 669 77.6
PSO782G2171 Papaver somniferum HOM05D004632 ORTHO05D005556 7.9e-174 614.8 666 76.9
PSO063G4867 Papaver somniferum HOM05D004632 ORTHO05D005556 2.3e-173 613.2 670 76.9
Os06g0649500 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 3.1e-170 602.8 444 70.3
MBI15_g05236_MAGBIO Magnolia biondii HOM05D004632 ORTHO05D005556 2.9e-168 596.3 454 69.6
Prupe.1G392800 Prunus persica HOM05D004632 ORTHO05D005556 4.6e-166 589.0 673 74.7
CiPaw.07G229300 Carya illinoinensis HOM05D004632 ORTHO05D005556 1.3e-165 587.4 678 74.3
Ciclev10007613m.g Citrus clementina HOM05D004632 ORTHO05D005556 1.8e-165 587.0 671 75.0
VMungo1309G0882 Vigna mungo HOM05D004632 ORTHO05D005556 1.8e-165 587.0 459 67.3
Sed0004025 Sechium edule HOM05D004632 ORTHO05D005556 1.1e-164 584.3 670 75.2
Duzib168G2284 Durio zibethinus HOM05D004632 ORTHO05D005556 1.9e-164 583.6 451 67.8
CsaV3_4G036640 Cucumis sativus L. HOM05D004632 ORTHO05D005556 1.3e-163 580.9 670 74.5
Potri.018G020200 Populus trichocarpa HOM05D004632 ORTHO05D005556 1.3e-163 580.9 674 73.4
ATR0739G094 Amborella trichopoda HOM05D004632 ORTHO05D005556 2.2e-163 580.1 452 66.4
Phvul.009G087600 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 2.2e-163 580.1 672 74.6
Peaxi162Scf00430g00519 Petunia axillaris HOM05D004632 ORTHO05D005556 3.7e-163 579.3 672 74.7
EL10Ac1g00704 Beta vulgaris HOM05D004632 ORTHO05D005556 4.8e-163 578.9 467 66.4
MELO3C016968.2 Cucumis melo HOM05D004632 ORTHO05D005556 4.8e-163 578.9 670 74.3
Psat5g032640 Pisum sativum HOM05D004632 ORTHO05D005556 4.8e-163 578.9 457 65.9
Potri.006G263400 Populus trichocarpa HOM05D004632 ORTHO05D005556 4.8e-163 578.9 674 72.8
Manes.16G128700 Manihot esculenta HOM05D004632 ORTHO05D005556 8.2e-163 578.2 668 74.1
Actinidia22297 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.1e-162 577.8 666 75.5
Glyma.04G061600 Glycine max HOM05D004632 ORTHO05D005556 4.1e-162 575.9 669 75.3
Atru.chr7.2537 Acer truncatum HOM05D004632 ORTHO05D005556 5.3e-162 575.5 679 73.9
Medtr3g106080 Medicago truncatula HOM05D004632 ORTHO05D005556 1.2e-161 574.3 671 74.1
Lalb_Chr23g0268241 Lupinus albus HOM05D004632 ORTHO05D005556 1.5e-161 573.9 665 74.1
DCAR_015265 Daucus carota HOM05D004632 ORTHO05D005556 2.0e-161 573.5 455 65.9
HanXRQChr03g0084861 Helianthus annuus HOM05D004632 ORTHO05D005556 2.6e-161 573.2 666 74.2
TPR.G1835 Trifolium pratense HOM05D004632 ORTHO05D005556 2.6e-161 573.2 457 65.6
CAN.G199.61 Capsicum annuum HOM05D004632 ORTHO05D005556 4.5e-161 572.4 674 73.6
Glyma.06G062300 Glycine max HOM05D004632 ORTHO05D005556 4.5e-161 572.4 668 75.1
RcHm_v2.0_Chr6g0299541 Rosa chinensis HOM05D004632 ORTHO05D005556 4.5e-161 572.4 666 74.8
Cc09_g08590 Coffea canephora HOM05D004632 ORTHO05D005556 1.3e-160 570.9 674 73.6
ClCG05G016370 Citrullus lanatus HOM05D004632 ORTHO05D005556 1.7e-160 570.5 677 74.0
MD00G1143300 Malus domestica HOM05D004632 ORTHO05D005556 6.5e-160 568.5 460 64.8
Sopen06g024220 Solanum pennellii HOM05D004632 ORTHO05D005556 8.5e-160 568.2 679 72.8
Ca_15774_v3 Cicer arietinum L. HOM05D004632 ORTHO05D005556 1.4e-159 567.4 671 73.8
Cpa.g.sc127.22 Carica papaya HOM05D004632 ORTHO05D005556 1.9e-159 567.0 459 64.7
Lj1g0022186 Lotus japonicus HOM05D004632 ORTHO05D005556 3.2e-159 566.2 454 67.0
Sabra06G0205900 Salix brachista HOM05D004632 ORTHO05D005556 7.2e-159 565.1 670 72.5
Lsat_1_v5_gn_6_77900 Lactuca sativa HOM05D004632 ORTHO05D005556 2.1e-158 563.5 463 65.4
Solyc06g065700.3 Solanum lycopersicum HOM05D004632 ORTHO05D005556 2.1e-158 563.5 677 72.4
Lsat_1_v5_gn_7_4261 Lactuca sativa HOM05D004632 ORTHO05D005556 2.7e-158 563.1 462 65.8
TWI32G0830 Tripterygium wilfordii HOM05D004632 ORTHO05D005556 2.7e-158 563.1 675 72.0
FAN20G0152 Fragaria x ananassa HOM05D004632 ORTHO05D005556 7.9e-158 561.6 680 72.5
FAN20G1191 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.0e-157 561.2 681 72.4
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea HOM05D004632 ORTHO05D005556 1.3e-157 560.8 454 65.6
ECA240G3507 Erigeron canadensis HOM05D004632 ORTHO05D005556 1.8e-157 560.5 665 73.2
FvH4_2g41020 Fragaria vesca HOM05D004632 ORTHO05D005556 1.8e-157 560.5 666 73.9
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea HOM05D004632 ORTHO05D005556 3.0e-157 559.7 666 74.2
MSTRG.9370 Avicennia marina HOM05D004632 ORTHO05D005556 2.5e-156 556.6 669 72.6
BcaB04g19812 Brassica carinata HOM05D004632 ORTHO05D005556 7.4e-156 555.1 461 63.3
Gohir.A05G058900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.2e-155 553.5 452 65.5
A09p06280 Brassica napus HOM05D004632 ORTHO05D005556 4.8e-155 552.4 458 64.2
BraA09t36273Z Brassica rapa HOM05D004632 ORTHO05D005556 4.8e-155 552.4 458 64.2
PGR042G1415 Punica granatum HOM05D004632 ORTHO05D005556 6.3e-155 552.0 675 72.1
BolC9t53613H Brassica oleracea HOM05D004632 ORTHO05D005556 1.1e-154 551.2 458 64.0
FAN27G1200 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.1e-154 551.2 454 65.0
Ah.05g177560 Amaranthus hybridus HOM05D004632 ORTHO05D005556 5.9e-153 545.4 474 63.5
Migut.N00603 Erythranthe guttata HOM05D004632 ORTHO05D005556 7.7e-153 545.0 667 72.3
BcaC04g23574 Brassica carinata HOM05D004632 ORTHO05D005556 1.3e-152 544.3 455 64.2
C09p06950 Brassica napus HOM05D004632 ORTHO05D005556 1.3e-152 544.3 455 63.7
Lj7A732T26 Lonicera japonica HOM05D004632 ORTHO05D005556 2.2e-152 543.5 683 67.1
Eucgr.C02661 Eucalyptus grandis HOM05D004632 ORTHO05D005556 2.9e-152 543.1 689 70.5
CDE05G3472 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 2.3e-149 533.5 668 60.8
Zm00001eb388650 Zea mays HOM05D004632 ORTHO05D005556 1.5e-148 530.8 568 81.0
Gorai.001G037500 Gossypium raimondii HOM05D004632 ORTHO05D005556 3.3e-148 529.6 452 63.1
Gohir.A07G031900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 1.7e-147 527.3 452 63.1
THA.LOC104814991 Tarenaya hassleriana HOM05D004632 ORTHO05D005556 1.1e-146 524.6 467 60.2
Glyma.17G222200 Glycine max HOM05D004632 ORTHO05D005556 3.1e-146 523.1 446 61.4
BolC2t12041H Brassica oleracea HOM05D004632 ORTHO05D005556 4.1e-146 522.7 460 61.5
Gohir.D07G035600 Gossypium hirsutum HOM05D004632 ORTHO05D005556 4.1e-146 522.7 452 62.2
Sp2g22380 Schrenkiella parvula HOM05D004632 ORTHO05D005556 1.2e-145 521.2 459 61.0
VMungo0647G2075 Vigna mungo HOM05D004632 ORTHO05D005556 1.5e-145 520.8 446 61.2
Phvul.001G042300 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 3.4e-145 519.6 446 61.0
Thhalv10003767m.g Eutrema salsugineum HOM05D004632 ORTHO05D005556 4.5e-145 519.2 454 62.1
SGA_v2.0_scaffold40G15680 Striga asiatica HOM05D004632 ORTHO05D005556 4.5e-145 519.2 704 67.9
AT5G25150 Arabidopsis thaliana HOM05D004632 ORTHO05D005556 2.2e-144 516.9 460 61.3
CSS0046974 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 2.9e-144 516.5 613 74.7
vmacro11252 Vaccinium macrocarpon HOM05D004632 ORTHO05D005556 5.5e-143 512.3 359 73.5
Carub.0006s2297 Capsella rubella HOM05D004632 ORTHO05D005556 9.4e-143 511.5 670 70.7
C02p59830 Brassica napus HOM05D004632 ORTHO05D005556 1.6e-142 510.8 460 60.4
AUR62013801 Chenopodium quinoa HOM05D004632 ORTHO05D005556 3.6e-142 509.6 406 66.5
MSTRG.4644 Avicennia marina HOM05D004632 ORTHO05D005556 1.0e-141 508.1 456 60.3
TAR626G1191 Trochodendron aralioides HOM05D004632 ORTHO05D005556 1.0e-141 508.1 566 80.9
Thecc.09G016800 Theobroma cacao HOM05D004632 ORTHO05D005556 6.7e-141 505.4 571 79.5
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 4.4e-140 502.7 463 58.5
CARHR188340 Cardamine hirsuta HOM05D004632 ORTHO05D005556 9.7e-140 501.5 461 59.9
A02p39940 Brassica napus HOM05D004632 ORTHO05D005556 2.0e-137 493.8 460 58.7
BraA02t08956Z Brassica rapa HOM05D004632 ORTHO05D005556 4.5e-137 492.7 460 59.1
Nitab4.5_0007182g0050 Nicotiana tabacum HOM05D004632 ORTHO05D005556 1.9e-135 487.3 453 59.6
AUR62023356 Chenopodium quinoa HOM05D004632 ORTHO05D005556 2.6e-132 476.9 459 59.5
Hund27424 Selenicereus undatus HOM05D004632 ORTHO05D005556 7.5e-132 475.3 578 50.7
Haze_21427 Corylus avellana HOM05D004632 ORTHO05D005556 4.1e-130 469.5 463 58.1
AL6G36810 Arabidopsis lyrata HOM05D004632 ORTHO05D005556 1.2e-129 468.0 442 58.8
SalBow1G2567 Salvia bowleyana HOM05D004632 ORTHO05D005556 2.0e-129 467.2 384 65.4
BcaB07g29936 Brassica carinata HOM05D004632 ORTHO05D005556 2.7e-129 466.8 455 56.0
Nitab4.5_0003976g0020 Nicotiana tabacum HOM05D004632 ORTHO05D005556 7.7e-129 465.3 725 60.4
Mapoly0009s0169 Marchantia polymorpha HOM05D004632 ORTHO05D005556 1.2e-116 424.9 468 48.9
TAR625G0176 Trochodendron aralioides HOM05D004632 ORTHO05D005556 1.3e-115 421.4 356 64.9
BcaC03g17924 Brassica carinata HOM05D004632 ORTHO05D005556 3.7e-115 419.9 460 52.4
Oeu061252.3 Olea europaea HOM05D004632 ORTHO05D005556 9.2e-114 415.2 700 63.1
Pp3c12_23330 Physcomitrium patens HOM05D004632 ORTHO05D005556 1.6e-110 404.4 462 50.4
Gohir.D05G060932 Gossypium hirsutum HOM05D004632 ORTHO05D005556 1.1e-106 391.7 410 55.6
Oeu013659.1 Olea europaea HOM05D004632 ORTHO05D005556 2.8e-102 377.1 279 71.0
SMO118G0104 Selaginella moellendorffii HOM05D004632 ORTHO05D005556 1.4e-101 374.8 393 50.6
CSS0042581 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 2.4e-98 364.0 293 68.3
MD15G1039100 Malus domestica HOM05D004632 ORTHO05D005556 5.8e-92 342.8 316 58.9
Actinidia13189 Actinidia chinensis HOM05D004632 ORTHO05D005556 2.4e-74 284.3 657 58.0
Zm00001eb259920 Zea mays HOM05D004632 ORTHO05D005556 1.1e-71 275.4 194 71.6
COL.COLO4_18941 Corchorus olitorius HOM05D004632 ORTHO05D005556 9.3e-58 229.2 183 70.5
PRCOL_00000651 Prasinoderma coloniale HOM05D004632 ORTHO05D005556 2.1e-54 218.0 463 33.0
VMungo1309G1582 Vigna mungo HOM05D004632 ORTHO05D005556 4.5e-52 210.3 141 74.5
MD15G1039000 Malus domestica HOM05D004632 ORTHO05D005556 6.5e-51 206.5 149 69.8
SEGI_13945 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 1.5e-47 195.3 159 62.3
SEGI_28232 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 3.3e-47 194.1 167 60.5
Dinv40981 Davidia involucrata HOM05D004632 ORTHO05D005556 2.2e-46 191.4 279 48.0
CBR_g41144 Chara braunii HOM05D004632 ORTHO05D005556 1.4e-45 188.7 194 47.4
Sed0017212 Sechium edule HOM05D004632 ORTHO05D005556 9.0e-45 186.0 568 45.2
MCO11G306 Micromonas commoda HOM05D004632 ORTHO05D005556 1.0e-43 182.6 481 28.5
CDE05G1210 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 1.8e-40 171.8 142 63.4
CDE05G3588 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 1.1e-39 169.1 130 62.3
MCO11G293 Micromonas commoda HOM05D004632 ORTHO05D005556 1.1e-39 169.1 524 27.1
Manes.03G009801 Manihot esculenta HOM05D004632 ORTHO05D005556 9.1e-37 159.5 409 35.5
AagrBONN_evm.TU.Sc2ySwM_228.3176 Anthoceros agrestis HOM05D003428 ORTHO05D004131 3.2e-34 151.0 147 51.7
Actinidia10511 Actinidia chinensis HOM05D004632 ORTHO05D005556 3.6e-33 147.5 143 55.9
CBR_g39739 Chara braunii HOM05D004632 ORTHO05D005556 1.0e-32 146.0 292 35.6
PSO541G0014 Papaver somniferum HOM05D004632 ORTHO05D005556 4.4e-31 140.6 116 65.5
Hma1.2p1_0059F.1_g032640 Hydrangea macrophylla HOM05D004632 ORTHO05D005556 1.2e-25 122.5 292 86.6
Sabra18G0022500 Salix brachista HOM05D004632 ORTHO05D005556 6.5e-19 100.1 291 34.0
Glyma.14G103500 Glycine max HOM05D004632 ORTHO05D005556 1.1e-18 99.4 100 53.0
Actinidia09762 Actinidia chinensis HOM05D004632 ORTHO05D005556 6.1e-17 93.6 73 65.8
SEGI_29407 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 1.2e-15 89.4 87 49.4
Cre12.g526950 Chlamydomonas reinhardtii HOM05D004632 ORTHO05D005556 7.5e-15 86.7 449 22.5
SEGI_30848 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 2.4e-13 81.6 77 51.9
Cfa022837 Carpinus fangiana HOM05D004632 ORTHO05D005556 5.3e-13 80.5 496 24.4
Haze_26425 Corylus avellana HOM05D004632 ORTHO05D005556 1.5e-10 72.4 198 31.3
FAN15G3250 Fragaria x ananassa HOM05D004632 ORTHO05D005556 5.5e-10 70.5 46 76.1
Actinidia10512 Actinidia chinensis HOM05D004632 ORTHO05D005556 2.1e-09 68.6 82 47.6
SEGI_21073 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 8.0e-09 66.6 51 68.6
MD15G1038900 Malus domestica HOM05D004632 ORTHO05D005556 1.0e-08 66.2 53 62.3
Os07g0205200 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 1.5e-07 62.4 84 42.9


User provided reference genes

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