Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 1.6e-114 417.5 566 100.0
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 8.3e-71 272.3 386 99.2
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 3.3e-19 100.9 122 44.3
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 3.6e-18 97.4 107 47.7
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 6.9e-17 93.2 112 45.5
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 9.0e-17 92.8 122 41.8
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 2.6e-16 91.3 109 47.7
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 4.5e-16 90.5 123 43.1
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 4.5e-16 90.5 124 43.5
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 5.8e-16 90.1 109 47.7
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 5.8e-16 90.1 124 41.1
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 7.6e-16 89.7 119 40.3
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 7.6e-16 89.7 120 41.7
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 9.9e-16 89.4 108 47.2
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 9.9e-16 89.4 124 41.1
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 9.9e-16 89.4 120 41.7
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 1.3e-15 89.0 84 48.8
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 1.7e-15 88.6 124 41.9
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.2e-15 88.2 119 39.5
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 2.2e-15 88.2 108 47.2
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 2.9e-15 87.8 108 47.2
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 3.8e-15 87.4 120 39.2
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 4.9e-15 87.0 108 46.3
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 4.9e-15 87.0 108 46.3
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 4.9e-15 87.0 110 45.5
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.9e-15 87.0 120 38.3
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 4.9e-15 87.0 122 39.3
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 4.9e-15 87.0 122 41.8
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 4.9e-15 87.0 120 39.2
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 6.4e-15 86.7 108 46.3
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 6.4e-15 86.7 121 42.1
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 6.4e-15 86.7 121 42.1
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 6.4e-15 86.7 122 37.7
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 6.4e-15 86.7 122 37.7
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 8.4e-15 86.3 109 45.0
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 8.4e-15 86.3 120 40.0
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 1.1e-14 85.9 108 46.3
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 1.1e-14 85.9 119 42.0
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 1.1e-14 85.9 108 46.3
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 1.1e-14 85.9 123 38.2
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.4e-14 85.5 120 40.8
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 1.4e-14 85.5 120 40.8
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 1.4e-14 85.5 116 38.8
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 1.4e-14 85.5 116 38.8
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.4e-14 85.5 112 41.1
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.4e-14 85.5 85 45.9
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 2.4e-14 84.7 121 41.3
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.4e-14 84.7 121 41.3
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 2.4e-14 84.7 120 38.3
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.2e-14 84.3 122 41.0
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 3.2e-14 84.3 120 39.2
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 7.1e-14 83.2 120 39.2
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 9.3e-14 82.8 121 37.2
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 9.3e-14 82.8 121 37.2
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 1.2e-13 82.4 83 48.2
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 1.6e-13 82.0 121 39.7
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 2.7e-13 81.3 124 38.7
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 3.5e-13 80.9 122 38.5
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 3.5e-13 80.9 119 37.0
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 3.5e-13 80.9 117 38.5
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 3.5e-13 80.9 126 38.9
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 4.6e-13 80.5 123 37.4
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.3e-12 79.0 123 37.4
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 1.8e-12 78.6 120 33.3
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 1.8e-12 78.6 123 36.6
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 2.3e-12 78.2 123 39.0
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 3.0e-12 77.8 82 45.1
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 3.0e-12 77.8 120 35.0
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 6.7e-12 76.6 124 36.3
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 8.7e-12 76.3 116 37.9
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 1.1e-11 75.9 129 37.2
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.9e-11 75.1 102 41.2
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 1.9e-11 75.1 122 36.9
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 1.9e-11 75.1 120 36.7
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 7.4e-11 73.2 122 34.4
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 9.6e-11 72.8 111 36.9
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.3e-10 72.4 111 38.7
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 1.3e-10 72.4 87 37.9
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 1.3e-10 72.4 127 34.6
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.6e-10 72.0 76 46.1
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 1.6e-10 72.0 69 46.4
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 1.6e-10 72.0 122 36.9
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 1.6e-10 72.0 90 42.2
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 1.6e-10 72.0 131 37.4
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 2.8e-10 71.2 114 31.6
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 4.8e-10 70.5 80 45.0
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 4.8e-10 70.5 99 39.4
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 6.2e-10 70.1 125 36.8
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 8.1e-10 69.7 101 37.6
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 1.4e-09 68.9 79 39.2
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.4e-09 68.9 117 34.2
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 1.8e-09 68.6 121 38.0
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 1.8e-09 68.6 124 34.7
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 3.1e-09 67.8 69 40.6
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 3.1e-09 67.8 124 34.7
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 4.0e-09 67.4 64 48.4
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 6.9e-09 66.6 76 42.1
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 6.9e-09 66.6 117 34.2
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 9.0e-09 66.2 97 38.1
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 9.0e-09 66.2 116 34.5
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 3.4e-08 64.3 86 44.2
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 5.8e-08 63.5 121 32.2
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 2.9e-07 61.2 87 41.4
SalBow8G1439 Salvia bowleyana HOM05D006918 ORTHO05D008525 4.9e-07 60.5 78 42.3
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 2.4e-06 58.2 71 46.5
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 5.5e-06 57.0 89 32.6


User provided reference genes

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