Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013645 Vanilla planifolia HOM05D002786 ORTHO05D022444 1.6e-43 179.1 95 100.0
Os02g0474700 Oryza sativa ssp. japonica HOM05D002786 ORTHO05D003493 1.5e-28 129.4 90 74.4
FvH4_4g12200 Fragaria vesca HOM05D002786 ORTHO05D003493 7.2e-28 127.1 93 73.1
FAN12G0646 Fragaria x ananassa HOM05D002786 ORTHO05D003493 7.2e-28 127.1 93 73.1
FAN17G1115 Fragaria x ananassa HOM05D002786 ORTHO05D003493 7.2e-28 127.1 93 73.1
FAN22G0173 Fragaria x ananassa HOM05D002786 ORTHO05D003493 7.2e-28 127.1 93 73.1
FAN07G1377 Fragaria x ananassa HOM05D002786 ORTHO05D003493 2.7e-27 125.2 93 72.0
Zm00001eb241000 Zea mays HOM05D002786 ORTHO05D003493 3.6e-27 124.8 90 74.4
FAN12G1472 Fragaria x ananassa HOM05D002786 ORTHO05D003493 6.1e-27 124.0 93 72.0
Manes.04G061600 Manihot esculenta HOM05D002786 ORTHO05D003493 1.4e-26 122.9 92 71.7
RcHm_v2.0_Chr4g0409961 Rosa chinensis HOM05D002786 ORTHO05D003493 1.4e-26 122.9 91 71.4
MBI11_g04281_MAGBIO Magnolia biondii HOM05D002786 ORTHO05D003493 3.0e-26 121.7 90 72.2
PSO017G6957 Papaver somniferum HOM05D002786 ORTHO05D003493 5.2e-26 120.9 92 70.7
PSO675G7863 Papaver somniferum HOM05D002786 ORTHO05D003493 5.2e-26 120.9 92 70.7
Thecc.04G180600 Theobroma cacao HOM05D002786 ORTHO05D003493 5.2e-26 120.9 73 80.8
GSVIVG01031670001 Vitis vinifera HOM05D002786 ORTHO05D003493 6.7e-26 120.6 92 70.7
Cc03_g10590 Coffea canephora HOM05D002786 ORTHO05D003493 1.5e-25 119.4 74 77.0
DCAR_026823 Daucus carota HOM05D002786 ORTHO05D003493 1.5e-25 119.4 77 75.3
Manes.11G114100 Manihot esculenta HOM05D002786 ORTHO05D003493 1.5e-25 119.4 75 74.7
vmacro00563 Vaccinium macrocarpon HOM05D002786 ORTHO05D003493 2.6e-25 118.6 92 67.4
Zm00001eb180520 Zea mays HOM05D002786 ORTHO05D003493 3.3e-25 118.2 90 74.4
Duzib212G1023 Durio zibethinus HOM05D002786 ORTHO05D003493 5.7e-25 117.5 74 77.0
MD04G1028800 Malus domestica HOM05D002786 ORTHO05D003493 5.7e-25 117.5 92 67.4
Duzib268G0977 Durio zibethinus HOM05D002786 ORTHO05D003493 7.5e-25 117.1 76 73.7
CsaV3_1G023100 Cucumis sativus L. HOM05D002786 ORTHO05D003493 9.7e-25 116.7 94 64.9
TAR636G0823 Trochodendron aralioides HOM05D002786 ORTHO05D003493 9.7e-25 116.7 71 81.7
MELO3C010592.2 Cucumis melo HOM05D002786 ORTHO05D003493 1.3e-24 116.3 92 64.1
Ciclev10018740m.g Citrus clementina HOM05D002786 ORTHO05D003493 1.7e-24 115.9 92 65.2
Phvul.008G018400 Phaseolus vulgaris HOM05D002786 ORTHO05D003493 1.7e-24 115.9 92 66.3
Haze_11083 Corylus avellana HOM05D002786 ORTHO05D003493 2.2e-24 115.5 93 67.7
Rhsim09G0037400 Rhododendron simsii HOM05D002786 ORTHO05D003493 2.2e-24 115.5 93 64.5
Oeu007217.1 Olea europaea HOM05D002786 ORTHO05D003493 2.8e-24 115.2 92 65.2
Oeu013399.2 Olea europaea HOM05D002786 ORTHO05D003493 2.8e-24 115.2 92 65.2
SGA_v2.0_scaffold109G31145 Striga asiatica HOM05D002786 ORTHO05D003493 2.8e-24 115.2 70 80.0
Psat6g243600 Pisum sativum HOM05D002786 ORTHO05D003493 3.7e-24 114.8 92 64.1
EL10Ac5g11639 Beta vulgaris HOM05D002786 ORTHO05D003493 4.8e-24 114.4 92 68.5
Duzib151G0845 Durio zibethinus HOM05D002786 ORTHO05D003493 4.8e-24 114.4 72 77.8
Gohir.D09G204200 Gossypium hirsutum HOM05D002786 ORTHO05D003493 6.3e-24 114.0 93 67.7
Nn7g37146 Nelumbo nucifera HOM05D002786 ORTHO05D003493 1.1e-23 113.2 94 64.9
Actinidia35908 Actinidia chinensis HOM05D002786 ORTHO05D003493 1.4e-23 112.8 93 66.7
MD00G1128300 Malus domestica HOM05D002786 ORTHO05D003493 1.4e-23 112.8 92 67.4
CiPaw.02G059800 Carya illinoinensis HOM05D002786 ORTHO05D003493 1.8e-23 112.5 92 68.5
Lj6A731T90 Lonicera japonica HOM05D002786 ORTHO05D003493 1.8e-23 112.5 71 74.6
Atru.chr3.1801 Acer truncatum HOM05D002786 ORTHO05D003493 2.4e-23 112.1 92 66.3
Lalb_Chr04g0258061 Lupinus albus HOM05D002786 ORTHO05D003493 3.1e-23 111.7 93 64.5
TPR.G8888 Trifolium pratense HOM05D002786 ORTHO05D003493 3.1e-23 111.7 93 64.5
Gohir.A09G210800 Gossypium hirsutum HOM05D002786 ORTHO05D003493 4.1e-23 111.3 92 66.3
MSTRG.24604 Avicennia marina HOM05D002786 ORTHO05D003493 5.3e-23 110.9 91 67.0
Cfa008548 Carpinus fangiana HOM05D002786 ORTHO05D003493 5.3e-23 110.9 93 66.7
Nitab4.5_0001687g0080 Nicotiana tabacum HOM05D002786 ORTHO05D003493 5.3e-23 110.9 71 74.6
Potri.002G232600 Populus trichocarpa HOM05D002786 ORTHO05D003493 7.0e-23 110.5 71 74.6
Aqoxy2G03945 Aquilegia oxysepala HOM05D002786 ORTHO05D003493 9.1e-23 110.2 71 76.1
Hund15147 Selenicereus undatus HOM05D002786 ORTHO05D003493 9.1e-23 110.2 71 71.8
Dinv22652 Davidia involucrata HOM05D002786 ORTHO05D003493 1.2e-22 109.8 93 65.6
CSS0033102 Camellia sinensis var. sinensis HOM05D002786 ORTHO05D003493 2.0e-22 109.0 91 65.9
TWI15G0371 Tripterygium wilfordii HOM05D002786 ORTHO05D003493 2.0e-22 109.0 92 65.2
CDE07G0250 Ceratophyllum demersum HOM05D002786 ORTHO05D003493 2.7e-22 108.6 96 63.5
HanXRQChr16g0527621 Helianthus annuus HOM05D002786 ORTHO05D003493 2.7e-22 108.6 83 68.7
Lj3C859G10 Lonicera japonica HOM05D002786 ORTHO05D003493 2.7e-22 108.6 68 76.5
Lalb_Chr02g0144511 Lupinus albus HOM05D002786 ORTHO05D003493 2.7e-22 108.6 92 64.1
Medtr1g116957 Medicago truncatula HOM05D002786 ORTHO05D003493 2.7e-22 108.6 72 75.0
COL.COLO4_10183 Corchorus olitorius HOM05D002786 ORTHO05D022444 3.5e-22 108.2 92 67.4
TWI63G1206 Tripterygium wilfordii HOM05D002786 ORTHO05D003493 3.5e-22 108.2 93 64.5
CiPaw.01G108500 Carya illinoinensis HOM05D002786 ORTHO05D003493 4.5e-22 107.8 93 64.5
ClCG08G003770 Citrullus lanatus HOM05D002786 ORTHO05D003493 4.5e-22 107.8 92 62.0
Lsat_1_v5_gn_3_105661 Lactuca sativa HOM05D002786 ORTHO05D003493 4.5e-22 107.8 92 62.0
Gorai.005G017400 Gossypium raimondii HOM05D002786 ORTHO05D003493 5.9e-22 107.5 92 63.0
THA.LOC104800912 Tarenaya hassleriana HOM05D002786 ORTHO05D003493 5.9e-22 107.5 75 69.3
Gohir.A10G136400 Gossypium hirsutum HOM05D002786 ORTHO05D003493 7.7e-22 107.1 70 75.7
HanXRQChr03g0062991 Helianthus annuus HOM05D002786 ORTHO05D003493 7.7e-22 107.1 93 60.2
Hma1.2p1_0412F.1_g147160 Hydrangea macrophylla HOM05D002786 ORTHO05D003493 7.7e-22 107.1 92 65.2
Lj1g0019142 Lotus japonicus HOM05D002786 ORTHO05D003493 7.7e-22 107.1 91 63.7
Solyc09g098240.4 Solanum lycopersicum HOM05D002786 ORTHO05D003493 7.7e-22 107.1 69 73.9
Sed0004282 Sechium edule HOM05D002786 ORTHO05D003493 1.0e-21 106.7 92 62.0
arahy.Tifrunner.gnm1.ann1.0F4JWJ Arachis hypogaea HOM05D002786 ORTHO05D003493 1.3e-21 106.3 92 62.0
arahy.Tifrunner.gnm1.ann1.6D1JC0 Arachis hypogaea HOM05D002786 ORTHO05D003493 1.3e-21 106.3 92 62.0
Eucgr.H02619 Eucalyptus grandis HOM05D002786 ORTHO05D003493 1.7e-21 105.9 93 64.5
Glyma.18G282800 Glycine max HOM05D002786 ORTHO05D003493 1.7e-21 105.9 92 60.9
PGR135G0001 Punica granatum HOM05D002786 ORTHO05D003493 2.2e-21 105.5 92 63.0
CANSAT78G0453 Cannabis sativa HOM05D002786 ORTHO05D003493 2.9e-21 105.1 92 60.9
Ca_07104_v3 Cicer arietinum L. HOM05D002786 ORTHO05D003493 2.9e-21 105.1 92 62.0
Ca_07106_v3 Cicer arietinum L. HOM05D002786 ORTHO05D003493 2.9e-21 105.1 92 62.0
Lj5g0000254 Lotus japonicus HOM05D002786 ORTHO05D003493 3.8e-21 104.8 70 72.9
TWI38G1748 Tripterygium wilfordii HOM05D002786 ORTHO05D003493 3.8e-21 104.8 92 63.0
Phvul.007G001700 Phaseolus vulgaris HOM05D002786 ORTHO05D003493 5.0e-21 104.4 91 60.4
Potri.014G149600 Populus trichocarpa HOM05D002786 ORTHO05D003493 5.0e-21 104.4 92 63.0
SGA_v2.0_scaffold290G47298 Striga asiatica HOM05D002786 ORTHO05D003493 5.0e-21 104.4 91 61.5
Glyma.10G297700 Glycine max HOM05D002786 ORTHO05D003493 6.5e-21 104.0 92 63.0
Sed0001099 Sechium edule HOM05D002786 ORTHO05D003493 1.1e-20 103.2 92 59.8
ATR0609G059 Amborella trichopoda HOM05D002786 ORTHO05D003493 1.5e-20 102.8 94 60.6
Glyma.08G258700 Glycine max HOM05D002786 ORTHO05D003493 1.5e-20 102.8 92 59.8
Lsat_1_v5_gn_4_22540 Lactuca sativa HOM05D002786 ORTHO05D003493 1.5e-20 102.8 112 54.5
Sopen09g036180 Solanum pennellii HOM05D002786 ORTHO05D003493 1.5e-20 102.8 69 71.0
CSS0009663 Camellia sinensis var. sinensis HOM05D002786 ORTHO05D003493 1.9e-20 102.4 84 66.7
unitig_21.g20553 Utricularia gibba HOM05D002786 ORTHO05D003493 1.9e-20 102.4 92 60.9
ECA234G1297 Erigeron canadensis HOM05D002786 ORTHO05D003493 2.5e-20 102.1 92 62.0
Psat3g188480 Pisum sativum HOM05D002786 ORTHO05D003493 2.5e-20 102.1 92 62.0
DCAR_002652 Daucus carota HOM05D002786 ORTHO05D003493 3.2e-20 101.7 93 60.2
Migut.N00442 Erythranthe guttata HOM05D002786 ORTHO05D003493 3.2e-20 101.7 91 59.3
Peaxi162Scf00378g00635 Petunia axillaris HOM05D002786 ORTHO05D003493 3.2e-20 101.7 96 61.5
Medtr7g021500 Medicago truncatula HOM05D002786 ORTHO05D003493 4.2e-20 101.3 92 60.9
Ah.02g115110 Amaranthus hybridus HOM05D002786 ORTHO05D003493 5.5e-20 100.9 86 65.1
HanXRQChr15g0471871 Helianthus annuus HOM05D002786 ORTHO05D003493 5.5e-20 100.9 90 61.1
Os04g0337300 Oryza sativa ssp. japonica HOM05D002786 ORTHO05D022444 5.5e-20 100.9 59 79.7
VMungo1383G3085 Vigna mungo HOM05D002786 ORTHO05D003493 5.5e-20 100.9 93 59.1
Gohir.D10G130200 Gossypium hirsutum HOM05D002786 ORTHO05D003493 7.2e-20 100.5 93 62.4
Gorai.011G143900 Gossypium raimondii HOM05D002786 ORTHO05D003493 7.2e-20 100.5 93 62.4
MSTRG.21983 Avicennia marina HOM05D002786 ORTHO05D003493 9.4e-20 100.1 82 63.4
TPR.G2948 Trifolium pratense HOM05D002786 ORTHO05D003493 9.4e-20 100.1 92 59.8
Thhalv10016172m.g Eutrema salsugineum HOM05D002786 ORTHO05D003493 1.2e-19 99.8 91 58.2
VMungo0720G0240 Vigna mungo HOM05D002786 ORTHO05D003493 1.2e-19 99.8 91 59.3
BcaB01g04029 Brassica carinata HOM05D002786 ORTHO05D003493 1.6e-19 99.4 91 59.3
Gorai.006G228100 Gossypium raimondii HOM05D002786 ORTHO05D003493 1.6e-19 99.4 126 50.8
THA.LOC104815866 Tarenaya hassleriana HOM05D002786 ORTHO05D003493 1.6e-19 99.4 71 67.6
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 2.1e-19 99.0 85 62.4
Lalb_Chr10g0092141 Lupinus albus HOM05D002786 ORTHO05D003493 2.1e-19 99.0 91 60.4
CAN.G710.41 Capsicum annuum HOM05D002786 ORTHO05D003493 2.7e-19 98.6 86 65.1
Prupe.1G180500 Prunus persica HOM05D002786 ORTHO05D003493 2.7e-19 98.6 92 60.9
SEGI_37762 Sequoiadendron giganteum HOM05D002786 ORTHO05D003493 3.6e-19 98.2 92 56.5
Ca_11422_v3 Cicer arietinum L. HOM05D002786 ORTHO05D003493 4.7e-19 97.8 92 58.7
MBI07_g00622_MAGBIO Magnolia biondii HOM05D002786 ORTHO05D003493 4.7e-19 97.8 68 69.1
Sabra02G0177400 Salix brachista HOM05D002786 ORTHO05D003493 4.7e-19 97.8 87 64.4
Ah.12g062150 Amaranthus hybridus HOM05D002786 ORTHO05D003493 6.1e-19 97.4 91 58.2
AT2G31660 Arabidopsis thaliana HOM05D002786 ORTHO05D003493 8.0e-19 97.1 74 60.8
ECA233G2610 Erigeron canadensis HOM05D002786 ORTHO05D003493 8.0e-19 97.1 64 71.9
Sp4g14060 Schrenkiella parvula HOM05D002786 ORTHO05D003493 8.0e-19 97.1 91 58.2
AL4G26900 Arabidopsis lyrata HOM05D002786 ORTHO05D003493 1.0e-18 96.7 73 61.6
BraA05t20321Z Brassica rapa HOM05D002786 ORTHO05D003493 1.8e-18 95.9 71 63.4
CARHR125290 Cardamine hirsuta HOM05D002786 ORTHO05D003493 2.3e-18 95.5 91 58.2
Pp3c15_21650 Physcomitrium patens HOM05D002786 ORTHO05D003493 2.3e-18 95.5 83 56.6
BcaB02g10406 Brassica carinata HOM05D002786 ORTHO05D003493 3.0e-18 95.1 91 56.0
Lalb_Chr06g0164651 Lupinus albus HOM05D002786 ORTHO05D003493 3.0e-18 95.1 92 56.5
BcaC02g11274 Brassica carinata HOM05D002786 ORTHO05D003493 5.2e-18 94.4 70 62.9
A05p13850 Brassica napus HOM05D002786 ORTHO05D003493 5.2e-18 94.4 70 62.9
C04p18220 Brassica napus HOM05D002786 ORTHO05D003493 5.2e-18 94.4 70 62.9
BolC4t23379H Brassica oleracea HOM05D002786 ORTHO05D003493 5.2e-18 94.4 70 62.9
BolC4t27579H Brassica oleracea HOM05D002786 ORTHO05D003493 5.2e-18 94.4 68 64.7
A04p24150 Brassica napus HOM05D002786 ORTHO05D003493 6.8e-18 94.0 68 64.7
C04p60880 Brassica napus HOM05D002786 ORTHO05D003493 6.8e-18 94.0 68 64.7
BraA03t11046Z Brassica rapa HOM05D002786 ORTHO05D003493 6.8e-18 94.0 91 56.0
BraA04t17935Z Brassica rapa HOM05D002786 ORTHO05D003493 6.8e-18 94.0 68 64.7
AUR62037083 Chenopodium quinoa HOM05D002786 ORTHO05D003493 1.5e-17 92.8 75 62.7
Aa31LG5G5320 Aethionema arabicum HOM05D002786 ORTHO05D003493 2.0e-17 92.4 78 62.8
Lj3g0017626 Lotus japonicus HOM05D002786 ORTHO05D003493 2.0e-17 92.4 80 61.2
Pp3c9_22260 Physcomitrium patens HOM05D002786 ORTHO05D003493 2.6e-17 92.0 83 57.8
A03p17820 Brassica napus HOM05D002786 ORTHO05D003493 3.4e-17 91.7 91 56.0
BcaC01g05937 Brassica carinata HOM05D002786 ORTHO05D003493 4.4e-17 91.3 91 56.0
A04p02290 Brassica napus HOM05D002786 ORTHO05D003493 4.4e-17 91.3 93 55.9
BraA04t15960Z Brassica rapa HOM05D002786 ORTHO05D003493 4.4e-17 91.3 93 55.9
CARHR169430 Cardamine hirsuta HOM05D002786 ORTHO05D003493 1.7e-16 89.4 93 53.8
C03p20890 Brassica napus HOM05D002786 ORTHO05D003493 4.8e-16 87.8 91 54.9
BolC3t14469H Brassica oleracea HOM05D002786 ORTHO05D003493 4.8e-16 87.8 91 54.9
BcaC02g10037 Brassica carinata HOM05D002786 ORTHO05D003493 6.3e-16 87.4 93 54.8
C04p33640 Brassica napus HOM05D002786 ORTHO05D003493 6.3e-16 87.4 93 54.8
Carub.0004s1296 Capsella rubella HOM05D002786 ORTHO05D003493 8.3e-16 87.0 85 54.1
BolC4t24933H Brassica oleracea HOM05D002786 ORTHO05D003493 1.8e-15 85.9 99 53.5
Mapoly0014s0213 Marchantia polymorpha HOM05D002786 ORTHO05D003493 1.8e-15 85.9 92 51.1
Aa31LG10G13510 Aethionema arabicum HOM05D002786 ORTHO05D003493 4.1e-15 84.7 93 49.5
BcaC08g44950 Brassica carinata HOM05D002786 ORTHO05D003493 5.4e-15 84.3 84 54.8
A07p24410 Brassica napus HOM05D002786 ORTHO05D003493 5.4e-15 84.3 84 54.8
C06p25840 Brassica napus HOM05D002786 ORTHO05D003493 5.4e-15 84.3 84 54.8
BolC6t37745H Brassica oleracea HOM05D002786 ORTHO05D003493 5.4e-15 84.3 84 54.8
BraA07t30088Z Brassica rapa HOM05D002786 ORTHO05D003493 5.4e-15 84.3 84 54.8
Sp5g03960 Schrenkiella parvula HOM05D002786 ORTHO05D003493 1.6e-14 82.8 84 54.8
BcaB02g08232 Brassica carinata HOM05D002786 ORTHO05D003493 2.0e-14 82.4 86 52.3
BcaB06g28532 Brassica carinata HOM05D002786 ORTHO05D003493 5.9e-14 80.9 60 61.7
Carub.0005s2578 Capsella rubella HOM05D002786 ORTHO05D003493 7.7e-14 80.5 83 54.2
THA.LOC104803420 Tarenaya hassleriana HOM05D002786 ORTHO05D003493 7.7e-14 80.5 83 51.8
AagrBONN_evm.TU.Sc2ySwM_344.2799 Anthoceros agrestis HOM05D002786 ORTHO05D003493 1.3e-13 79.7 68 51.5
Thhalv10005763m.g Eutrema salsugineum HOM05D002786 ORTHO05D003493 1.3e-13 79.7 77 57.1
BcaB02g07490 Brassica carinata HOM05D002786 ORTHO05D003493 2.3e-13 79.0 84 52.4
Nitab4.5_0001526g0120 Nicotiana tabacum HOM05D002786 ORTHO05D003493 2.3e-13 79.0 62 64.5
SMO169G0196 Selaginella moellendorffii HOM05D002786 ORTHO05D003493 2.9e-13 78.6 91 49.5
Lsat_1_v5_gn_4_22560 Lactuca sativa HOM05D002786 ORTHO05D003493 3.8e-13 78.2 68 55.9
Nitab4.5_0000978g0140 Nicotiana tabacum HOM05D002786 ORTHO05D003493 6.5e-13 77.4 95 48.4
Nitab4.5_0004758g0040 Nicotiana tabacum HOM05D002786 ORTHO05D003493 1.5e-12 76.3 95 50.5
Lj1g0021376 Lotus japonicus HOM05D002786 ORTHO05D003493 3.2e-12 75.1 91 49.5
AT3G59020 Arabidopsis thaliana HOM05D002786 ORTHO05D003493 4.2e-12 74.7 83 50.6
AL5G40900 Arabidopsis lyrata HOM05D002786 ORTHO05D003493 7.2e-12 73.9 83 50.6
Lj1g0005822 Lotus japonicus HOM05D002786 ORTHO05D003493 1.2e-11 73.2 92 47.8
AUR62036490 Chenopodium quinoa HOM05D002786 ORTHO05D003493 6.8e-10 67.4 95 44.2
Sabra14G0112800 Salix brachista HOM05D002786 ORTHO05D003493 1.5e-09 66.2 54 59.3
Peaxi162Scf00286g00442 Petunia axillaris HOM05D002786 ORTHO05D003493 3.4e-09 65.1 40 77.5
Cre13.g562450 Chlamydomonas reinhardtii HOM05D002786 ORTHO05D003493 1.3e-08 63.2 79 41.8
Phvul.005G111900 Phaseolus vulgaris HOM05D002786 ORTHO05D022444 1.1e-07 60.1 44 61.4
Medtr7g107210 Medicago truncatula HOM05D002786 ORTHO05D022444 1.2e-06 56.6 60 51.7
MCO08G239 Micromonas commoda HOM05D002786 ORTHO05D003493 1.6e-06 56.2 72 44.4


User provided reference genes

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