Gene: AT3G59020
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G59020
- Transcript Identifier AT3G59020.2
- Gene Type Coding gene
- Location Chr3 : 21810973-21817418 : negative
Gene Family Information
- ID HOM05D002786
- #Genes/#Species 248/99
- Phylogenetic origin
- ID ORTHO05D003493
- #Genes/#Species 221/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G59020.2
- uniprot F4J738
Descriptions
- Description ARM repeat superfamily protein
- Computational description ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, importin-alpha export receptor activity, binding; INVOLVED IN: intracellular protein transport, cell proliferation, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), CAS/CSE, C-terminal (InterPro:IPR005043), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G31660.1); Has 8110 Blast hits to 5178 proteins in 456 species: Archae - 41; Bacteria - 603; Metazoa - 2454; Fungi - 1580; Plants - 679; Viruses - 179; Other Eukaryotes - 2574 (source: NCBI BLink).
- Computational description ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, importin-alpha export receptor activity, binding; INVOLVED IN: intracellular protein transport, cell proliferation, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), CAS/CSE, C-terminal (InterPro:IPR005043), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G31660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | Gene Ontology | intracellular protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0006606 | IBA | Gene Ontology | protein import into nucleus | 1 |
| GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031267 | IEA | Gene Ontology | small GTPase binding | |
| GO:0031267 | IEA | InterPro | small GTPase binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | IBA | Gene Ontology | cytosol | 1 |
| GO:0005635 | IBA | Gene Ontology | nuclear envelope | 1 |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 23.5.1.2.8 | Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (SAD2/EMA1) |