Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013448 Vanilla planifolia HOM05D001598 ORTHO05D007192 3.7e-94 348.2 177 100.0
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 5.0e-83 311.2 176 92.0
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 1.2e-73 280.0 169 83.4
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 2.0e-71 272.7 181 75.7
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 1.3e-70 270.0 181 75.1
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 1.3e-70 270.0 180 75.0
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 1.7e-70 269.6 181 75.7
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 1.7e-70 269.6 181 74.6
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 4.9e-70 268.1 181 72.9
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 4.9e-70 268.1 181 74.0
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 6.4e-70 267.7 181 74.0
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 1.4e-69 266.5 181 74.6
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 1.4e-69 266.5 181 74.6
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 1.9e-69 266.2 181 74.0
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 2.4e-69 265.8 181 73.5
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 2.4e-69 265.8 177 72.3
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 2.4e-69 265.8 181 74.0
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 3.2e-69 265.4 181 72.9
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 7.0e-69 264.2 181 74.0
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 9.2e-69 263.8 182 73.6
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 9.2e-69 263.8 172 75.6
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 9.2e-69 263.8 181 74.0
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 1.2e-68 263.5 178 75.3
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 1.2e-68 263.5 177 73.4
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 1.6e-68 263.1 181 72.9
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 1.6e-68 263.1 181 72.4
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 2.0e-68 262.7 164 77.4
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 4.6e-68 261.5 165 78.2
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 4.6e-68 261.5 185 70.3
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 4.6e-68 261.5 185 70.3
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 4.6e-68 261.5 181 73.5
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 4.6e-68 261.5 181 71.8
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 6.0e-68 261.2 165 78.2
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 7.8e-68 260.8 181 71.8
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 1.3e-67 260.0 164 78.0
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 1.3e-67 260.0 175 74.9
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 1.7e-67 259.6 180 72.2
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 2.3e-67 259.2 165 77.6
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 2.3e-67 259.2 182 73.1
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 3.0e-67 258.8 169 75.1
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 3.0e-67 258.8 177 72.3
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 3.0e-67 258.8 169 75.1
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 3.9e-67 258.5 165 77.0
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 3.9e-67 258.5 181 71.8
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 3.9e-67 258.5 172 74.4
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 3.9e-67 258.5 174 72.4
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 3.9e-67 258.5 169 72.8
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 5.0e-67 258.1 180 71.7
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 5.0e-67 258.1 181 70.7
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 5.0e-67 258.1 176 73.9
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 5.0e-67 258.1 181 72.9
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 6.6e-67 257.7 187 70.1
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 8.6e-67 257.3 182 71.4
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 8.6e-67 257.3 182 71.4
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 8.6e-67 257.3 184 70.7
Lj2A895T22 Lonicera japonica HOM05D001598 ORTHO05D007192 8.6e-67 257.3 201 67.2
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 8.6e-67 257.3 169 74.0
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 1.1e-66 256.9 172 71.5
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 1.1e-66 256.9 181 72.9
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 1.9e-66 256.1 179 71.5
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 1.9e-66 256.1 176 71.6
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 1.9e-66 256.1 176 72.2
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 2.5e-66 255.8 184 69.6
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 3.3e-66 255.4 172 70.9
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 3.3e-66 255.4 181 70.7
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 4.3e-66 255.0 170 73.5
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 4.3e-66 255.0 181 70.2
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 5.6e-66 254.6 176 71.0
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 7.3e-66 254.2 174 71.8
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 9.5e-66 253.8 169 72.8
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 9.5e-66 253.8 181 69.1
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 1.6e-65 253.1 172 69.8
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 2.1e-65 252.7 170 72.4
CSS0046041 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 2.8e-65 252.3 205 65.9
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 2.8e-65 252.3 180 70.0
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 8.0e-65 250.8 182 69.2
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 8.0e-65 250.8 169 71.6
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 1.4e-64 250.0 172 72.7
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 2.3e-64 249.2 181 68.5
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 6.8e-64 247.7 181 68.0
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 1.2e-63 246.9 181 68.0
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 3.7e-62 241.9 174 70.1
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 1.9e-61 239.6 181 65.7
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 4.1e-61 238.4 182 67.0
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 7.1e-61 237.7 182 67.6
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 1.2e-60 236.9 207 61.4
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 1.2e-60 236.9 169 69.8
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 2.1e-60 236.1 207 60.9
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 3.0e-59 232.3 180 66.7
SEGI_37017 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 4.3e-58 228.4 168 69.0
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 9.5e-58 227.3 237 54.9
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 2.1e-57 226.1 173 68.2
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 8.9e-56 220.7 178 64.0
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 1.1e-53 213.8 308 44.2
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 1.7e-51 206.5 163 63.2
HPP92_013468 Vanilla planifolia HOM05D001598 ORTHO05D007192 2.8e-41 172.6 99 90.9
Sc21g0006570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 4.4e-39 165.2 109 73.4
Manes.11G103300 Manihot esculenta HOM05D001598 ORTHO05D007192 9.9e-39 164.1 111 74.8
Prupe.6G153900 Prunus persica HOM05D001598 ORTHO05D007192 7.9e-36 154.5 108 73.1
Nn1g08035 Nelumbo nucifera HOM05D001598 ORTHO05D007192 1.7e-30 136.7 91 68.1
SEGI_32063 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 5.4e-29 131.7 104 64.4
BcaB08g37328 Brassica carinata HOM05D001598 ORTHO05D007192 4.6e-28 128.6 79 75.9
SEGI_02371 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 4.3e-26 122.1 90 70.0
Lj2C893T10 Lonicera japonica HOM05D001598 ORTHO05D007192 5.6e-26 121.7 78 76.9
BcaB08g37330 Brassica carinata HOM05D001598 ORTHO05D007192 4.0e-24 115.5 83 69.9
PRCOL_00002568 Prasinoderma coloniale HOM05D001598 ORTHO05D007192 6.9e-24 114.8 142 46.5
Zm00001eb067470 Zea mays HOM05D001598 ORTHO05D007192 3.4e-23 112.5 86 66.3
CBR_g53773 Chara braunii HOM05D000019 ORTHO05D000002 2.7e-20 102.8 156 40.4
MCO03G199 Micromonas commoda HOM05D001598 ORTHO05D007192 2.3e-19 99.8 115 47.0
BcaC04g19497 Brassica carinata HOM05D001598 ORTHO05D007192 1.5e-18 97.1 90 58.9
SGA_v2.0_scaffold6G03251 Striga asiatica HOM05D001598 ORTHO05D007192 2.5e-18 96.3 186 39.8
TAR374G1328 Trochodendron aralioides HOM05D001598 ORTHO05D007192 2.5e-18 96.3 65 75.4
Glyma.14G045450 Glycine max HOM05D001598 ORTHO05D007192 9.6e-18 94.4 65 72.3
Cre06.g282150 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 1.0e-14 84.3 147 36.1
CBR_g53769 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-14 83.2 62 62.9


User provided reference genes

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