Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013415 Vanilla planifolia HOM05D006539 ORTHO05D008694 8.1e-117 423.7 206 100.0
HPP92_013411 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.2e-80 303.5 191 81.7
Lalb_Chr10g0093241 Lupinus albus HOM05D006539 ORTHO05D008694 2.4e-60 236.1 188 64.4
arahy.Tifrunner.gnm1.ann1.YFBV2Q Arachis hypogaea HOM05D006539 ORTHO05D008694 9.1e-60 234.2 183 65.0
PGR004G2004 Punica granatum HOM05D006539 ORTHO05D008694 2.6e-59 232.6 182 64.3
Medtr7g012240 Medicago truncatula HOM05D006539 ORTHO05D008694 5.9e-59 231.5 189 63.5
CDE06G2615 Ceratophyllum demersum HOM05D006539 ORTHO05D008694 1.7e-58 229.9 183 62.3
Ca_06802_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 1.7e-58 229.9 189 63.5
TPR.G33480 Trifolium pratense HOM05D006539 ORTHO05D008694 1.7e-58 229.9 189 63.0
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 1.7e-58 229.9 183 65.0
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 1.7e-58 229.9 183 65.0
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 2.2e-58 229.6 183 65.0
QL02p039353 Quercus lobata HOM05D006539 ORTHO05D008694 2.2e-58 229.6 183 64.5
GSVIVG01011483001 Vitis vinifera HOM05D006539 ORTHO05D008694 2.2e-58 229.6 186 63.4
Oeu000853.1 Olea europaea HOM05D006539 ORTHO05D008694 2.9e-58 229.2 186 62.9
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 3.8e-58 228.8 186 62.9
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 3.8e-58 228.8 189 61.9
Atru.chr8.368 Acer truncatum HOM05D006539 ORTHO05D008694 5.0e-58 228.4 187 63.1
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 5.0e-58 228.4 187 62.6
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 8.5e-58 227.6 182 63.2
CiPaw.03G091900 Carya illinoinensis HOM05D006539 ORTHO05D008694 1.1e-57 227.3 183 63.9
TWI32G0765 Tripterygium wilfordii HOM05D006539 ORTHO05D008694 1.1e-57 227.3 183 63.9
Manes.02G050600 Manihot esculenta HOM05D006539 ORTHO05D008694 1.4e-57 226.9 183 63.9
VMungo1383G3577 Vigna mungo HOM05D006539 ORTHO05D008694 1.4e-57 226.9 189 61.4
Prupe.3G259900 Prunus persica HOM05D006539 ORTHO05D008694 1.9e-57 226.5 183 62.8
MD17G1055800 Malus domestica HOM05D006539 ORTHO05D008694 2.5e-57 226.1 187 61.5
ATR0111G028 Amborella trichopoda HOM05D006539 ORTHO05D008694 3.2e-57 225.7 187 62.0
Glyma.08G241400 Glycine max HOM05D006539 ORTHO05D008694 4.2e-57 225.3 189 61.4
Lj1g0006679 Lotus japonicus HOM05D006539 ORTHO05D008694 4.2e-57 225.3 189 62.4
QL02p039600 Quercus lobata HOM05D006539 ORTHO05D008694 4.2e-57 225.3 183 63.9
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 4.2e-57 225.3 194 58.2
FAN05G4473 Fragaria x ananassa HOM05D006539 ORTHO05D008694 5.5e-57 224.9 183 63.9
Peaxi162Scf00166g00943 Petunia axillaris HOM05D006539 ORTHO05D008694 5.5e-57 224.9 184 63.6
Eucgr.I01991 Eucalyptus grandis HOM05D006539 ORTHO05D008694 7.2e-57 224.6 183 63.4
Potri.004G122300 Populus trichocarpa HOM05D006539 ORTHO05D008694 9.4e-57 224.2 183 63.4
Zm00001eb326670 Zea mays HOM05D006539 ORTHO05D008694 1.2e-56 223.8 183 62.3
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 1.6e-56 223.4 184 60.9
AUR62034477 Chenopodium quinoa HOM05D006539 ORTHO05D008694 2.1e-56 223.0 184 60.9
FvH4_6g47560 Fragaria vesca HOM05D006539 ORTHO05D008694 2.1e-56 223.0 183 63.4
FAN14G0848 Fragaria x ananassa HOM05D006539 ORTHO05D008694 2.1e-56 223.0 183 63.4
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 2.1e-56 223.0 183 62.3
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 2.1e-56 223.0 183 62.3
Solyc02g088540.3 Solanum lycopersicum HOM05D006539 ORTHO05D008694 2.1e-56 223.0 187 62.0
Sopen02g033260 Solanum pennellii HOM05D006539 ORTHO05D008694 2.1e-56 223.0 187 62.0
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 2.7e-56 222.6 187 61.0
Os07g0598100 Oryza sativa ssp. japonica HOM05D006539 ORTHO05D008694 2.7e-56 222.6 183 60.7
RcHm_v2.0_Chr2g0166661 Rosa chinensis HOM05D006539 ORTHO05D008694 2.7e-56 222.6 183 63.4
PGSC0003DMG400001350 Solanum tuberosum HOM05D006539 ORTHO05D008694 3.6e-56 222.2 187 62.0
Rhsim10G0046900 Rhododendron simsii HOM05D006539 ORTHO05D008694 4.7e-56 221.9 184 60.9
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 4.7e-56 221.9 183 61.7
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 7.9e-56 221.1 188 60.1
Cc07_g03820 Coffea canephora HOM05D006539 ORTHO05D008694 7.9e-56 221.1 185 60.0
DCAR_011065 Daucus carota HOM05D006539 ORTHO05D008694 7.9e-56 221.1 185 62.2
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 7.9e-56 221.1 183 61.2
arahy.Tifrunner.gnm1.ann1.54MYG6 Arachis hypogaea HOM05D006539 ORTHO05D008694 1.0e-55 220.7 217 55.3
AUR62018139 Chenopodium quinoa HOM05D006539 ORTHO05D008694 1.0e-55 220.7 183 60.7
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 1.0e-55 220.7 183 61.2
Nn4g23332 Nelumbo nucifera HOM05D006539 ORTHO05D008694 1.4e-55 220.3 183 62.3
HPP92_006554 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.4e-55 220.3 148 76.4
CAN.G206.194 Capsicum annuum HOM05D006539 ORTHO05D008694 1.8e-55 219.9 184 62.0
Hund15564 Selenicereus undatus HOM05D006539 ORTHO05D008694 2.3e-55 219.5 186 60.8
EL10Ac2g03043 Beta vulgaris HOM05D006539 ORTHO05D008694 3.0e-55 219.2 186 60.2
vmacro05668 Vaccinium macrocarpon HOM05D006539 ORTHO05D008694 3.0e-55 219.2 184 60.3
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 3.9e-55 218.8 183 61.2
SalBow1G8487 Salvia bowleyana HOM05D006539 ORTHO05D008694 5.2e-55 218.4 184 59.2
CsaV3_3G041040 Cucumis sativus L. HOM05D006539 ORTHO05D008694 6.7e-55 218.0 183 61.7
Aqoxy3G00450 Aquilegia oxysepala HOM05D006539 ORTHO05D008694 8.8e-55 217.6 183 61.2
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 8.8e-55 217.6 183 59.0
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 8.8e-55 217.6 188 59.0
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 1.1e-54 217.2 183 60.7
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 2.0e-54 216.5 183 61.7
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 2.0e-54 216.5 183 61.2
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 2.6e-54 216.1 183 61.2
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 4.4e-54 215.3 186 59.1
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 5.7e-54 214.9 186 60.2
MSTRG.23905 Avicennia marina HOM05D006539 ORTHO05D008694 1.3e-53 213.8 186 59.1
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 1.3e-53 213.8 183 58.5
AL6G26250 Arabidopsis lyrata HOM05D006539 ORTHO05D008694 2.2e-53 213.0 186 59.1
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 2.2e-53 213.0 183 58.5
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 2.2e-53 213.0 183 58.5
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 2.8e-53 212.6 183 57.9
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 4.8e-53 211.8 183 59.6
Psat3g198480 Pisum sativum HOM05D006539 ORTHO05D008694 4.8e-53 211.8 220 53.6
Migut.H00658 Erythranthe guttata HOM05D006539 ORTHO05D008694 8.2e-53 211.1 186 58.6
SGA_v2.0_scaffold4G02416 Striga asiatica HOM05D006539 ORTHO05D008694 4.5e-51 205.3 184 57.1
unitig_899.g15160 Utricularia gibba HOM05D006539 ORTHO05D008694 5.0e-50 201.8 183 55.7
Haze_14476 Corylus avellana HOM05D003516 ORTHO05D004068 9.4e-49 197.6 183 57.9
PSO478G0472 Papaver somniferum HOM05D006539 ORTHO05D008694 2.0e-46 189.9 183 55.7
SMO228G0204 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 1.1e-44 184.1 186 50.0
SEGI_40704 Sequoiadendron giganteum HOM05D006539 ORTHO05D008694 2.7e-43 179.5 183 49.7
Mapoly0088s0068 Marchantia polymorpha HOM05D006539 ORTHO05D008694 5.9e-43 178.3 186 47.3
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 1.0e-42 177.6 187 50.3
CBR_g38172 Chara braunii HOM05D006539 ORTHO05D008694 1.5e-41 173.7 187 46.0
Pp3c12_19160 Physcomitrium patens HOM05D006539 ORTHO05D008694 5.5e-41 171.8 185 46.5
AUR62044515 Chenopodium quinoa HOM05D006539 ORTHO05D008694 9.4e-41 171.0 146 58.2
Nitab4.5_0008573g0030 Nicotiana tabacum HOM05D006539 ORTHO05D008694 8.0e-40 167.9 187 50.3
SMO116G0014 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 8.8e-39 164.5 182 45.6
MELO3C009837.2 Cucumis melo HOM05D006539 ORTHO05D008694 2.6e-38 162.9 104 77.9
FAN02G0136 Fragaria x ananassa HOM05D006539 ORTHO05D008694 1.7e-37 160.2 136 62.5
Nitab4.5_0003216g0020 Nicotiana tabacum HOM05D006539 ORTHO05D008694 2.0e-30 136.7 187 43.9
PRCOL_00002708 Prasinoderma coloniale HOM05D006539 ORTHO05D008694 4.9e-29 132.1 181 38.1
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 1.3e-26 124.0 184 33.7
arahy.Tifrunner.gnm1.ann1.B86ER2 Arachis hypogaea HOM05D006539 ORTHO05D009236 3.6e-24 115.9 146 45.9
MCO16G092 Micromonas commoda HOM05D006539 ORTHO05D008694 2.0e-22 110.2 166 36.7
CSS0026858 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 2.6e-22 109.8 127 51.2
CSS0050509 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 3.7e-21 105.9 137 47.4
Ciclev10013255m.g Citrus clementina HOM05D006539 ORTHO05D008694 2.4e-20 103.2 66 78.8
Ciclev10013894m.g Citrus clementina HOM05D006539 ORTHO05D008694 4.6e-19 99.0 99 49.5
FAN09G1445 Fragaria x ananassa HOM05D006539 ORTHO05D008694 1.8e-15 87.0 183 32.8
CSS0042966 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 5.2e-15 85.5 50 72.0
CSS0047989 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 5.2e-15 85.5 50 72.0
Dinv33805 Davidia involucrata HOM05D006539 ORTHO05D008694 5.8e-14 82.0 50 72.0
Ca_06844_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 9.8e-14 81.3 46 73.9
QL02p073352 Quercus lobata HOM05D006539 ORTHO05D008694 1.7e-13 80.5 66 66.7
Pp3c3_25470 Physcomitrium patens HOM05D006539 ORTHO05D008694 8.3e-13 78.2 101 38.6
Cre09.g392950 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D044332 3.6e-08 62.8 165 26.1
MD07G1180000 Malus domestica HOM05D006539 ORTHO05D248072 3.1e-07 59.7 34 67.6


User provided reference genes

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