Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012387 Vanilla planifolia HOM05D004731 ORTHO05D005577 3.3e-92 341.7 168 100.0
HPP92_012326 Vanilla planifolia HOM05D004731 ORTHO05D005577 6.9e-90 334.0 165 99.4
Sc06g0009530 Simmondsia chinensis HOM05D004731 ORTHO05D005577 2.1e-75 285.8 164 84.1
SalBow7G1245 Salvia bowleyana HOM05D004731 ORTHO05D005577 6.2e-75 284.3 162 82.7
Dinv02741 Davidia involucrata HOM05D004731 ORTHO05D005577 1.4e-74 283.1 162 82.7
Ciclev10014655m.g Citrus clementina HOM05D004731 ORTHO05D005577 1.8e-74 282.7 162 82.1
TWI36G0780 Tripterygium wilfordii HOM05D004731 ORTHO05D005577 1.8e-74 282.7 162 82.1
Dinv39693 Davidia involucrata HOM05D004731 ORTHO05D005577 2.4e-74 282.3 162 81.5
CSS0029719 Camellia sinensis var. sinensis HOM05D004731 ORTHO05D005577 3.1e-74 282.0 162 82.1
Sed0023583 Sechium edule HOM05D004731 ORTHO05D005577 3.1e-74 282.0 162 82.1
MELO3C019243.2 Cucumis melo HOM05D004731 ORTHO05D005577 4.0e-74 281.6 162 82.1
CsaV3_2G035120 Cucumis sativus L. HOM05D004731 ORTHO05D005577 4.0e-74 281.6 162 82.1
THA.LOC104808494 Tarenaya hassleriana HOM05D004731 ORTHO05D005577 4.0e-74 281.6 162 82.1
FvH4_6g43440 Fragaria vesca HOM05D004731 ORTHO05D005577 9.0e-74 280.4 162 80.9
FAN09G0477 Fragaria x ananassa HOM05D004731 ORTHO05D005577 9.0e-74 280.4 162 80.9
FAN14G1020 Fragaria x ananassa HOM05D004731 ORTHO05D005577 9.0e-74 280.4 162 80.9
FAN14G3935 Fragaria x ananassa HOM05D004731 ORTHO05D005577 9.0e-74 280.4 162 80.9
Hund24408 Selenicereus undatus HOM05D004731 ORTHO05D005577 9.0e-74 280.4 165 81.8
Manes.12G076000 Manihot esculenta HOM05D004731 ORTHO05D005577 1.5e-73 279.6 162 80.9
Thecc.02G312600 Theobroma cacao HOM05D004731 ORTHO05D005577 1.5e-73 279.6 162 80.9
EL10Ac8g18891 Beta vulgaris HOM05D004731 ORTHO05D005577 2.0e-73 279.3 158 82.9
MD09G1106500 Malus domestica HOM05D004731 ORTHO05D005577 2.0e-73 279.3 162 80.2
QL08p033580 Quercus lobata HOM05D004731 ORTHO05D005577 2.0e-73 279.3 162 80.9
BolC5t32904H Brassica oleracea HOM05D004731 ORTHO05D005577 2.6e-73 278.9 162 81.5
BraA05t21584Z Brassica rapa HOM05D004731 ORTHO05D005577 2.6e-73 278.9 162 81.5
Potri.017G036900 Populus trichocarpa HOM05D004731 ORTHO05D005577 2.6e-73 278.9 162 80.9
RcHm_v2.0_Chr2g0159821 Rosa chinensis HOM05D004731 ORTHO05D005577 2.6e-73 278.9 162 80.2
Gohir.D13G087500 Gossypium hirsutum HOM05D004731 ORTHO05D005577 3.4e-73 278.5 162 80.9
Gorai.013G099800 Gossypium raimondii HOM05D004731 ORTHO05D005577 3.4e-73 278.5 162 80.9
Lsat_1_v5_gn_8_128420 Lactuca sativa HOM05D004731 ORTHO05D005577 3.4e-73 278.5 162 80.9
PGR142G3606 Punica granatum HOM05D004731 ORTHO05D005577 3.4e-73 278.5 162 80.9
Aqoxy4G01979 Aquilegia oxysepala HOM05D004731 ORTHO05D005577 4.5e-73 278.1 162 79.6
Oeu011087.1 Olea europaea HOM05D004731 ORTHO05D005577 4.5e-73 278.1 162 80.9
A03p42440 Brassica napus HOM05D004731 ORTHO05D005577 5.8e-73 277.7 162 80.9
C03p51920 Brassica napus HOM05D004731 ORTHO05D005577 5.8e-73 277.7 162 80.9
BraA03t13397Z Brassica rapa HOM05D004731 ORTHO05D005577 5.8e-73 277.7 162 80.9
Cc05_g04940 Coffea canephora HOM05D004731 ORTHO05D005577 5.8e-73 277.7 162 80.2
Thhalv10022122m.g Eutrema salsugineum HOM05D004731 ORTHO05D005577 5.8e-73 277.7 162 80.9
Sopen07g026110 Solanum pennellii HOM05D004731 ORTHO05D005577 5.8e-73 277.7 162 80.9
AT3G21720 Arabidopsis thaliana HOM05D004731 ORTHO05D005577 7.6e-73 277.3 162 80.9
CANSAT64G0826 Cannabis sativa HOM05D004731 ORTHO05D005577 7.6e-73 277.3 162 80.2
Carub.0003s2177 Capsella rubella HOM05D004731 ORTHO05D005577 7.6e-73 277.3 162 80.9
CARHR097670 Cardamine hirsuta HOM05D004731 ORTHO05D005577 7.6e-73 277.3 162 80.9
MD17G1094300 Malus domestica HOM05D004731 ORTHO05D005577 7.6e-73 277.3 162 80.2
Peaxi162Scf00007g01115 Petunia axillaris HOM05D004731 ORTHO05D005577 7.6e-73 277.3 162 80.2
Sp3g19730 Schrenkiella parvula HOM05D004731 ORTHO05D005577 7.6e-73 277.3 162 80.9
Aa31LG8G8350 Aethionema arabicum HOM05D004731 ORTHO05D005577 1.0e-72 276.9 162 80.9
arahy.Tifrunner.gnm1.ann1.TKPZ56 Arachis hypogaea HOM05D004731 ORTHO05D005577 1.0e-72 276.9 165 78.2
CDE11G1033 Ceratophyllum demersum HOM05D004731 ORTHO05D005577 1.0e-72 276.9 167 79.6
Actinidia09705 Actinidia chinensis HOM05D004731 ORTHO05D005577 1.3e-72 276.6 162 80.9
Cfa014429 Carpinus fangiana HOM05D004731 ORTHO05D005577 1.3e-72 276.6 162 79.6
DCAR_012950 Daucus carota HOM05D004731 ORTHO05D005577 1.3e-72 276.6 157 81.5
FAN02G3012 Fragaria x ananassa HOM05D004731 ORTHO05D005577 1.3e-72 276.6 162 79.6
Prupe.3G219100 Prunus persica HOM05D004731 ORTHO05D005577 1.3e-72 276.6 162 79.0
SGA_v2.0_scaffold34G13870 Striga asiatica HOM05D004731 ORTHO05D005577 1.3e-72 276.6 167 79.6
Gohir.A13G093600 Gossypium hirsutum HOM05D004731 ORTHO05D005577 1.7e-72 276.2 162 80.2
arahy.Tifrunner.gnm1.ann1.X0NGMJ Arachis hypogaea HOM05D004731 ORTHO05D005577 2.2e-72 275.8 165 77.6
Haze_12887 Corylus avellana HOM05D004731 ORTHO05D005577 2.2e-72 275.8 162 79.0
Zm00001eb323090 Zea mays HOM05D004731 ORTHO05D005577 2.2e-72 275.8 158 82.3
Gohir.A03G109600 Gossypium hirsutum HOM05D004731 ORTHO05D005577 2.9e-72 275.4 162 79.0
Manes.13G072200 Manihot esculenta HOM05D004731 ORTHO05D005577 2.9e-72 275.4 165 80.0
Rhsim06G0159200 Rhododendron simsii HOM05D004731 ORTHO05D005577 2.9e-72 275.4 162 79.6
Cpa.g.sc8.225 Carica papaya HOM05D004731 ORTHO05D005577 3.8e-72 275.0 162 80.2
CDE05G2280 Ceratophyllum demersum HOM05D004731 ORTHO05D005577 3.8e-72 275.0 167 78.4
Migut.M00410 Erythranthe guttata HOM05D004731 ORTHO05D005577 3.8e-72 275.0 162 80.2
PSO541G0248 Papaver somniferum HOM05D004731 ORTHO05D005577 4.9e-72 274.6 162 80.2
Phvul.011G106801 Phaseolus vulgaris HOM05D004731 ORTHO05D005577 8.4e-72 273.9 162 78.4
AUR62039771 Chenopodium quinoa HOM05D004731 ORTHO05D005577 1.1e-71 273.5 162 80.2
MBI02_g10107_MAGBIO Magnolia biondii HOM05D004731 ORTHO05D005577 1.1e-71 273.5 152 84.2
Nn1g07047 Nelumbo nucifera HOM05D004731 ORTHO05D005577 1.1e-71 273.5 158 81.6
PGSC0003DMG400025487 Solanum tuberosum HOM05D004731 ORTHO05D005577 1.1e-71 273.5 162 79.6
Medtr4g046757 Medicago truncatula HOM05D004731 ORTHO05D005577 1.4e-71 273.1 162 79.6
QL08p033547 Quercus lobata HOM05D004731 ORTHO05D005577 1.4e-71 273.1 152 82.9
Sabra07G0099600 Salix brachista HOM05D004731 ORTHO05D005577 1.4e-71 273.1 162 77.8
Atru.chr6.3161 Acer truncatum HOM05D004731 ORTHO05D005577 1.9e-71 272.7 162 78.4
Gohir.D02G134400 Gossypium hirsutum HOM05D004731 ORTHO05D005577 1.9e-71 272.7 162 78.4
ClCG02G008490 Citrullus lanatus HOM05D004731 ORTHO05D005577 2.5e-71 272.3 152 83.6
HanXRQChr04g0110581 Helianthus annuus HOM05D004731 ORTHO05D005577 2.5e-71 272.3 162 77.8
PSO675G8406 Papaver somniferum HOM05D004731 ORTHO05D005577 2.5e-71 272.3 162 79.0
Os07g0529000 Oryza sativa ssp. japonica HOM05D004731 ORTHO05D005577 3.2e-71 271.9 158 80.4
ATR0697G164 Amborella trichopoda HOM05D004731 ORTHO05D005577 4.2e-71 271.6 154 83.1
CiPaw.03G162000 Carya illinoinensis HOM05D004731 ORTHO05D005577 4.2e-71 271.6 162 77.8
Glyma.06G303200 Glycine max HOM05D004731 ORTHO05D005577 4.2e-71 271.6 162 77.8
AUR62028388 Chenopodium quinoa HOM05D004731 ORTHO05D005577 5.5e-71 271.2 165 78.2
FAN05G5305 Fragaria x ananassa HOM05D004731 ORTHO05D005577 7.1e-71 270.8 152 82.9
Lj1P757T15 Lonicera japonica HOM05D004731 ORTHO05D005577 7.1e-71 270.8 152 82.9
BcaB06g26278 Brassica carinata HOM05D004731 ORTHO05D005577 9.3e-71 270.4 152 83.6
BcaC01g03487 Brassica carinata HOM05D004731 ORTHO05D005577 9.3e-71 270.4 152 83.6
A05p27010 Brassica napus HOM05D004731 ORTHO05D005577 9.3e-71 270.4 152 83.6
BcaC05g28137 Brassica carinata HOM05D004731 ORTHO05D005577 1.2e-70 270.0 152 83.6
Eucgr.K00802 Eucalyptus grandis HOM05D004731 ORTHO05D005577 2.1e-70 269.2 152 82.9
Lj3g0018668 Lotus japonicus HOM05D004731 ORTHO05D005577 2.1e-70 269.2 162 77.2
AL3G35840 Arabidopsis lyrata HOM05D004731 ORTHO05D005577 2.7e-70 268.9 152 82.9
BcaB04g20567 Brassica carinata HOM05D004731 ORTHO05D005577 2.7e-70 268.9 162 79.0
Nitab4.5_0003509g0010 Nicotiana tabacum HOM05D004731 ORTHO05D005577 2.7e-70 268.9 152 82.9
vmacro12222 Vaccinium macrocarpon HOM05D004731 ORTHO05D005577 2.7e-70 268.9 155 81.3
VMungo1127G2299 Vigna mungo HOM05D004731 ORTHO05D005577 2.7e-70 268.9 162 76.5
Glyma.12G100500 Glycine max HOM05D004731 ORTHO05D005577 3.5e-70 268.5 162 77.2
Gorai.005G150300 Gossypium raimondii HOM05D004731 ORTHO05D005577 6.0e-70 267.7 162 77.2
TAR624G1207 Trochodendron aralioides HOM05D004731 ORTHO05D005577 6.0e-70 267.7 152 82.2
Lalb_Chr19g0135731 Lupinus albus HOM05D004731 ORTHO05D005577 1.0e-69 266.9 162 77.8
ATR0697G058 Amborella trichopoda HOM05D004731 ORTHO05D005577 1.8e-69 266.2 154 80.5
Nitab4.5_0010201g0030 Nicotiana tabacum HOM05D004731 ORTHO05D005577 1.8e-69 266.2 152 81.6
Potri.007G122900 Populus trichocarpa HOM05D004731 ORTHO05D005577 2.3e-69 265.8 152 80.9
DCAR_019287 Daucus carota HOM05D004731 ORTHO05D005577 3.0e-69 265.4 156 79.5
Nitab4.5_0001176g0080 Nicotiana tabacum HOM05D004731 ORTHO05D005577 3.0e-69 265.4 152 81.6
Ca_27733_v3 Cicer arietinum L. HOM05D004731 ORTHO05D005577 8.7e-69 263.8 152 80.9
DCAR_021183 Daucus carota HOM05D004731 ORTHO05D005577 3.3e-68 261.9 156 77.6
unitig_899.g15246 Utricularia gibba HOM05D004731 ORTHO05D005577 5.7e-68 261.2 152 80.9
Psat7g179960 Pisum sativum HOM05D004731 ORTHO05D005577 9.6e-68 260.4 162 74.7
Nn1g03615 Nelumbo nucifera HOM05D004731 ORTHO05D005577 1.3e-67 260.0 168 76.8
ATR0697G137 Amborella trichopoda HOM05D004731 ORTHO05D005577 2.8e-67 258.8 152 78.9
TWI75G0012 Tripterygium wilfordii HOM05D004731 ORTHO05D005577 3.7e-67 258.5 150 81.3
Ah.09g228590 Amaranthus hybridus HOM05D004731 ORTHO05D005577 1.1e-66 256.9 163 74.8
BolC3t17478H Brassica oleracea HOM05D004731 ORTHO05D005577 1.8e-66 256.1 146 82.2
Lalb_Chr03g0028821 Lupinus albus HOM05D004731 ORTHO05D005577 5.9e-65 251.1 155 75.5
SEGI_12486 Sequoiadendron giganteum HOM05D004731 ORTHO05D005577 3.8e-64 248.4 153 75.8
SEGI_22707 Sequoiadendron giganteum HOM05D004731 ORTHO05D005577 1.9e-63 246.1 152 75.7
Mapoly0023s0108 Marchantia polymorpha HOM05D004731 ORTHO05D005577 5.3e-58 228.0 155 68.4
Pp3c7_2440 Physcomitrium patens HOM05D004731 ORTHO05D005577 1.5e-57 226.5 154 68.8
Pp3c7_2470 Physcomitrium patens HOM05D004731 ORTHO05D005577 1.5e-57 226.5 154 68.8
SMO196G0149 Selaginella moellendorffii HOM05D004731 ORTHO05D005577 7.7e-57 224.2 154 68.8
Mapoly0115s0061 Marchantia polymorpha HOM05D004731 ORTHO05D005577 6.1e-54 214.5 155 64.5
CBR_g8290 Chara braunii HOM05D004731 ORTHO05D005577 5.1e-53 211.5 152 67.8
BolC1t04201H Brassica oleracea HOM05D004731 ORTHO05D005577 8.8e-53 210.7 124 80.6
ECA233G0706 Erigeron canadensis HOM05D004731 ORTHO05D005577 1.7e-51 206.5 112 85.7
AagrBONN_evm.TU.Sc2ySwM_344.2376 Anthoceros agrestis HOM05D004731 ORTHO05D005577 1.8e-50 203.0 151 65.6
Phvul.011G105500 Phaseolus vulgaris HOM05D004731 ORTHO05D005577 2.5e-47 192.6 103 85.4
Cfa025720 Carpinus fangiana HOM05D004731 ORTHO05D005577 4.4e-44 181.8 148 56.1
BcaB04g20564 Brassica carinata HOM05D004731 ORTHO05D005577 8.0e-38 161.0 126 64.3
Cfa027059 Carpinus fangiana HOM05D004731 ORTHO05D005577 1.1e-36 157.1 153 49.0
BcaB04g20563 Brassica carinata HOM05D004731 ORTHO05D005577 2.7e-33 146.0 165 51.5
C05p41690 Brassica napus HOM05D004731 ORTHO05D005577 2.2e-32 142.9 72 90.3
COL.COLO4_27683 Corchorus olitorius HOM05D004731 ORTHO05D005577 8.5e-32 141.0 71 90.1
GSVIVG01030608001 Vitis vinifera HOM05D004731 ORTHO05D005577 9.1e-26 120.9 80 70.0
BcaB04g20568 Brassica carinata HOM05D004731 ORTHO05D005577 1.6e-14 83.6 38 94.7
Nn1g03620 Nelumbo nucifera HOM05D004731 ORTHO05D005577 1.3e-08 63.9 28 96.4
Cre06.g282800 Chlamydomonas reinhardtii HOM05D004731 ORTHO05D005577 4.7e-06 55.5 108 34.3


User provided reference genes

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