Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012037 Vanilla planifolia HOM05D003492 ORTHO05D005115 3.7e-91 338.2 169 100.0
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 9.5e-39 164.1 159 53.5
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 2.8e-38 162.5 154 55.8
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 3.4e-36 155.6 154 54.5
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 3.4e-36 155.6 154 52.6
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 4.4e-36 155.2 159 50.9
Zm00001eb286110 Zea mays HOM05D003492 ORTHO05D005115 4.4e-36 155.2 154 51.9
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 5.7e-36 154.8 154 52.6
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 1.7e-35 153.3 154 52.6
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 2.8e-35 152.5 154 50.6
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 3.7e-35 152.1 154 51.9
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 8.3e-35 151.0 154 52.6
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 1.1e-34 150.6 155 50.3
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.1e-34 150.6 154 51.9
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.4e-34 150.2 154 51.3
CiPaw.01G300100 Carya illinoinensis HOM05D003492 ORTHO05D005115 1.8e-34 149.8 154 51.3
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 1.8e-34 149.8 154 52.6
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 1.8e-34 149.8 154 50.6
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 2.4e-34 149.4 154 51.9
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 3.1e-34 149.1 154 49.4
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 3.1e-34 149.1 154 53.9
MBI15_g19421_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D005115 4.1e-34 148.7 159 49.7
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 5.4e-34 148.3 154 53.9
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 9.2e-34 147.5 154 50.6
Actinidia13945 Actinidia chinensis HOM05D003492 ORTHO05D005115 1.2e-33 147.1 154 51.9
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 1.2e-33 147.1 154 51.9
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 1.6e-33 146.7 154 50.0
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.6e-33 146.7 154 50.0
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 1.6e-33 146.7 154 50.6
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 2.0e-33 146.4 154 49.4
FAN03G1608 Fragaria x ananassa HOM05D003492 ORTHO05D005115 2.7e-33 146.0 154 50.6
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 3.5e-33 145.6 159 49.1
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 4.5e-33 145.2 154 50.6
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 7.8e-33 144.4 154 50.0
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 7.8e-33 144.4 154 48.1
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 1.0e-32 144.1 155 50.3
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 1.3e-32 143.7 154 48.7
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 2.3e-32 142.9 154 51.9
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 2.9e-32 142.5 154 49.4
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 3.9e-32 142.1 154 49.4
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 3.9e-32 142.1 154 50.0
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 6.6e-32 141.4 154 50.6
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 6.6e-32 141.4 154 49.4
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 6.6e-32 141.4 155 50.3
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 1.1e-31 140.6 159 45.3
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 1.5e-31 140.2 154 50.0
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 1.5e-31 140.2 154 48.1
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 1.9e-31 139.8 154 46.8
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 2.5e-31 139.4 152 50.0
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 2.5e-31 139.4 154 50.0
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 2.5e-31 139.4 154 50.0
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 5.6e-31 138.3 155 47.7
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 7.3e-31 137.9 155 49.0
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 1.2e-30 137.1 155 47.7
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 2.1e-30 136.3 160 46.9
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 2.1e-30 136.3 154 46.8
Cc02_g06280 Coffea canephora HOM05D003492 ORTHO05D005115 2.1e-30 136.3 156 49.4
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 2.1e-30 136.3 154 49.4
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 3.6e-30 135.6 160 46.9
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 4.7e-30 135.2 154 46.8
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 8.0e-30 134.4 155 47.1
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 1.4e-29 133.7 154 49.4
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 1.4e-29 133.7 154 49.4
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 1.4e-29 133.7 154 48.1
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 3.1e-29 132.5 154 48.1
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 3.1e-29 132.5 154 48.7
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 6.8e-29 131.3 154 48.1
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 6.8e-29 131.3 154 48.1
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 8.9e-29 131.0 154 47.4
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 1.2e-28 130.6 154 47.4
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 1.2e-28 130.6 154 47.4
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 2.0e-28 129.8 155 49.0
Peaxi162Scf00284g00912 Petunia axillaris HOM05D003492 ORTHO05D005115 2.6e-28 129.4 156 48.1
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 3.4e-28 129.0 154 47.4
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 3.4e-28 129.0 154 48.7
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 4.4e-28 128.6 154 48.1
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 5.8e-28 128.3 161 46.6
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 7.5e-28 127.9 154 46.1
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 7.5e-28 127.9 155 47.7
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 1.3e-27 127.1 154 46.8
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 2.9e-27 125.9 159 44.7
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 1.1e-26 124.0 155 47.7
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 1.1e-26 124.0 155 47.7
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 1.9e-26 123.2 154 45.5
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 2.4e-26 122.9 154 46.8
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 5.4e-26 121.7 154 44.2
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 7.0e-26 121.3 180 39.4
CDE12G0028 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 1.6e-25 120.2 160 43.8
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 7.8e-25 117.9 150 44.7
CAN.G78.68 Capsicum annuum HOM05D003492 ORTHO05D005115 3.9e-24 115.5 153 45.1
Hund28567 Selenicereus undatus HOM05D003492 ORTHO05D005115 3.9e-24 115.5 128 46.9
Hund29345 Selenicereus undatus HOM05D003492 ORTHO05D005115 3.9e-24 115.5 128 46.9
Oeu049666.1 Olea europaea HOM05D003492 ORTHO05D005115 8.6e-24 114.4 229 35.4
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 1.1e-23 114.0 109 53.2
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 3.3e-23 112.5 258 31.8
Lj8A65T41 Lonicera japonica HOM05D003492 ORTHO05D005115 6.8e-21 104.8 87 60.9
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 3.7e-19 99.0 154 38.3
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 3.5e-17 92.4 173 35.8
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 1.1e-15 87.4 96 46.9
SHI03335 Sapria himalayana HOM05D003492 ORTHO05D005115 3.3e-15 85.9 86 53.5
AagrBONN_evm.TU.Sc2ySwM_344.5492 Anthoceros agrestis HOM05D003492 ORTHO05D005115 4.0e-13 79.0 171 31.6
Mapoly0044s0071 Marchantia polymorpha HOM05D003492 ORTHO05D005115 6.8e-13 78.2 160 31.9
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 1.3e-11 73.9 154 34.4
SEGI_00595 Sequoiadendron giganteum HOM05D003492 ORTHO05D005115 2.2e-11 73.2 145 34.5
SMO331G0080 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 4.1e-10 68.9 144 31.9
Nitab4.5_0011089g0020 Nicotiana tabacum HOM05D003492 ORTHO05D005115 2.5e-07 59.7 47 55.3
MBI18_g01105_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D010488 9.5e-07 57.8 60 50.0
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 2.1e-06 56.6 66 45.5


User provided reference genes

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