Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011049 Vanilla planifolia HOM05D000276 ORTHO05D006204 1.2e-183 646.4 328 100.0
Aqoxy7G04179 Aquilegia oxysepala HOM05D000276 ORTHO05D006204 5.5e-67 258.8 333 48.3
QL05p001260 Quercus lobata HOM05D000276 ORTHO05D006204 4.6e-66 255.8 344 48.3
RcHm_v2.0_Chr2g0147831 Rosa chinensis HOM05D000276 ORTHO05D006204 4.6e-66 255.8 336 46.4
FAN05G4018 Fragaria x ananassa HOM05D000276 ORTHO05D006204 4.3e-64 249.2 340 45.9
MBI19_g32870_MAGBIO Magnolia biondii HOM05D000276 ORTHO05D006204 4.3e-64 249.2 311 49.5
Nitab4.5_0008337g0030 Nicotiana tabacum HOM05D000276 ORTHO05D006204 1.1e-62 244.6 341 45.7
Sabra01G0129700 Salix brachista HOM05D000276 ORTHO05D006204 1.4e-62 244.2 339 46.6
FvH4_6g35790 Fragaria vesca HOM05D000276 ORTHO05D006204 1.8e-62 243.8 336 45.2
FAN09G0859 Fragaria x ananassa HOM05D000276 ORTHO05D006204 1.8e-62 243.8 336 45.2
FAN14G4808 Fragaria x ananassa HOM05D000276 ORTHO05D006204 1.8e-62 243.8 336 45.2
FAN14G2098 Fragaria x ananassa HOM05D000276 ORTHO05D006204 2.4e-62 243.4 336 45.2
TAR383G0418 Trochodendron aralioides HOM05D000276 ORTHO05D006204 2.4e-62 243.4 313 47.6
TWI59G1360 Tripterygium wilfordii HOM05D000276 ORTHO05D006204 9.1e-62 241.5 328 46.6
TAR624G0068 Trochodendron aralioides HOM05D000276 ORTHO05D006204 9.1e-62 241.5 331 48.3
Nitab4.5_0010687g0030 Nicotiana tabacum HOM05D000276 ORTHO05D006204 1.5e-61 240.7 334 45.8
Peaxi162Scf00038g02240 Petunia axillaris HOM05D000276 ORTHO05D006204 3.4e-61 239.6 326 46.9
Thecc.06G129800 Theobroma cacao HOM05D000276 ORTHO05D006204 4.5e-61 239.2 331 45.0
CANSAT56G1386 Cannabis sativa HOM05D000276 ORTHO05D006204 7.7e-61 238.4 352 46.0
Sopen03g041360 Solanum pennellii HOM05D000276 ORTHO05D006204 1.7e-60 237.3 347 45.2
Haze_16133 Corylus avellana HOM05D000276 ORTHO05D006204 2.2e-60 236.9 338 46.2
Solyc03g123590.4 Solanum lycopersicum HOM05D000276 ORTHO05D006204 2.2e-60 236.9 347 45.0
MBI13_g01693_MAGBIO Magnolia biondii HOM05D000276 ORTHO05D006204 8.5e-60 235.0 326 46.0
Duzib192G0480 Durio zibethinus HOM05D000276 ORTHO05D006204 1.4e-59 234.2 336 43.5
Cfa003463 Carpinus fangiana HOM05D000276 ORTHO05D006204 3.2e-59 233.0 338 45.6
MD17G1154200 Malus domestica HOM05D000276 ORTHO05D006204 3.2e-59 233.0 328 47.9
Prupe.3G031200 Prunus persica HOM05D000276 ORTHO05D006204 4.2e-59 232.6 338 47.3
CAN.G790.61 Capsicum annuum HOM05D000276 ORTHO05D006204 5.5e-59 232.3 325 44.9
Duzib235G0075 Durio zibethinus HOM05D000276 ORTHO05D006204 2.1e-58 230.3 337 45.1
CiPaw.02G131200 Carya illinoinensis HOM05D000276 ORTHO05D006204 7.9e-58 228.4 350 43.4
TWI23G0693 Tripterygium wilfordii HOM05D000276 ORTHO05D006204 1.0e-57 228.0 326 47.5
Manes.11G012900 Manihot esculenta HOM05D000276 ORTHO05D006204 1.4e-57 227.6 342 45.0
Potri.001G163000 Populus trichocarpa HOM05D000276 ORTHO05D006204 1.4e-57 227.6 336 44.9
PSO135G0530 Papaver somniferum HOM05D000276 ORTHO05D006204 1.8e-57 227.3 334 47.3
CSS0009948 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D006204 2.3e-57 226.9 346 44.5
TAR626G1847 Trochodendron aralioides HOM05D000276 ORTHO05D006204 3.9e-57 226.1 320 45.9
Cc04_g00750 Coffea canephora HOM05D000276 ORTHO05D006204 1.1e-56 224.6 362 43.4
Gohir.A10G047611 Gossypium hirsutum HOM05D000276 ORTHO05D006204 1.5e-56 224.2 331 44.4
Nn6g35726 Nelumbo nucifera HOM05D000276 ORTHO05D006204 2.6e-56 223.4 316 47.5
Ciclev10025517m.g Citrus clementina HOM05D000276 ORTHO05D006204 4.4e-56 222.6 345 43.8
Gohir.D10G051900 Gossypium hirsutum HOM05D000276 ORTHO05D006204 9.7e-56 221.5 330 43.9
Gorai.011G055400 Gossypium raimondii HOM05D000276 ORTHO05D006204 9.7e-56 221.5 330 43.9
MELO3C022698.2 Cucumis melo HOM05D000276 ORTHO05D006204 2.2e-55 220.3 330 46.4
Oeu059014.1 Olea europaea HOM05D000276 ORTHO05D006204 2.2e-55 220.3 327 45.3
Rhsim12G0213200 Rhododendron simsii HOM05D000276 ORTHO05D003951 2.8e-55 219.9 340 44.4
Actinidia24430 Actinidia chinensis HOM05D000276 ORTHO05D003951 4.8e-55 219.2 355 42.8
Dinv37820 Davidia involucrata HOM05D000276 ORTHO05D006204 6.3e-55 218.8 341 45.2
PSO724G0674 Papaver somniferum HOM05D000276 ORTHO05D006204 8.2e-55 218.4 314 47.1
AUR62001408 Chenopodium quinoa HOM05D000276 ORTHO05D006204 4.1e-54 216.1 326 43.9
Ca_28218_v3 Cicer arietinum L. HOM05D000276 ORTHO05D006204 5.3e-54 215.7 329 44.1
Ca_29892_v3 Cicer arietinum L. HOM05D000276 ORTHO05D006204 5.3e-54 215.7 329 44.1
ClCG07G014300 Citrullus lanatus HOM05D000276 ORTHO05D006204 5.3e-54 215.7 335 45.1
Eucgr.I02162 Eucalyptus grandis HOM05D000276 ORTHO05D006204 5.3e-54 215.7 327 44.6
CsaV3_3G031000 Cucumis sativus L. HOM05D000276 ORTHO05D006204 2.6e-53 213.4 330 45.5
Manes.04G150700 Manihot esculenta HOM05D000276 ORTHO05D006204 3.4e-53 213.0 341 42.2
Lj5A30G67 Lonicera japonica HOM05D000276 ORTHO05D006204 5.9e-53 212.2 362 42.0
GSVIVG01016672001 Vitis vinifera HOM05D000276 ORTHO05D006204 5.9e-53 212.2 321 43.9
MSTRG.22517 Avicennia marina HOM05D000276 ORTHO05D006204 1.0e-52 211.5 349 41.0
Hund18639 Selenicereus undatus HOM05D000276 ORTHO05D006204 1.3e-52 211.1 337 44.8
SalBow6G5970 Salvia bowleyana HOM05D000276 ORTHO05D006204 1.7e-52 210.7 312 42.0
MSTRG.10914 Avicennia marina HOM05D000276 ORTHO05D006204 2.2e-52 210.3 349 42.1
VMungo0331G0415 Vigna mungo HOM05D000276 ORTHO05D006204 5.0e-52 209.1 336 43.5
Lalb_Chr17g0343241 Lupinus albus HOM05D000276 ORTHO05D006204 6.5e-52 208.8 346 40.5
MD09G1173100 Malus domestica HOM05D000276 ORTHO05D006204 6.5e-52 208.8 328 45.1
Medtr8g023130 Medicago truncatula HOM05D000276 ORTHO05D006204 8.5e-52 208.4 348 41.7
Phvul.010G123300 Phaseolus vulgaris HOM05D000276 ORTHO05D006204 8.5e-52 208.4 334 43.4
AUR62025617 Chenopodium quinoa HOM05D000276 ORTHO05D006204 1.1e-51 208.0 324 42.3
Rhsim08G0244500 Rhododendron simsii HOM05D000276 ORTHO05D006204 1.1e-51 208.0 340 42.9
vmacro18765 Vaccinium macrocarpon HOM05D000276 ORTHO05D006204 1.1e-51 208.0 331 42.3
Cpa.g.sc25.189 Carica papaya HOM05D000276 ORTHO05D006204 3.2e-51 206.5 329 41.3
Sed0017728 Sechium edule HOM05D000276 ORTHO05D006204 9.4e-51 204.9 319 45.1
PGR119G2259 Punica granatum HOM05D000276 ORTHO05D006204 1.2e-50 204.5 346 40.8
EL10Ac7g16493 Beta vulgaris HOM05D000276 ORTHO05D006204 2.7e-50 203.4 362 42.0
CDE06G0894 Ceratophyllum demersum HOM05D000276 ORTHO05D006204 2.7e-50 203.4 318 42.1
Glyma.16G013800 Glycine max HOM05D000276 ORTHO05D006204 4.7e-50 202.6 329 43.8
Psat4g165480 Pisum sativum HOM05D000276 ORTHO05D006204 7.9e-50 201.8 332 43.1
CDE03G0116 Ceratophyllum demersum HOM05D000276 ORTHO05D006204 1.4e-49 201.1 316 42.4
TPR.G8719 Trifolium pratense HOM05D000276 ORTHO05D006204 1.8e-49 200.7 336 41.4
CiPaw.01G211700 Carya illinoinensis HOM05D000276 ORTHO05D006204 5.2e-49 199.1 205 54.6
Lj3g0018226 Lotus japonicus HOM05D000276 ORTHO05D006204 5.2e-49 199.1 327 42.2
Lj9C538T3 Lonicera japonica HOM05D000276 ORTHO05D006204 1.5e-48 197.6 323 45.5
vmacro22015 Vaccinium macrocarpon HOM05D000276 ORTHO05D006204 2.6e-48 196.8 357 40.9
vmacro15085 Vaccinium macrocarpon HOM05D000276 ORTHO05D006204 5.7e-48 195.7 325 42.2
arahy.Tifrunner.gnm1.ann1.ISG7DQ Arachis hypogaea HOM05D000276 ORTHO05D006204 1.3e-47 194.5 356 39.6
arahy.Tifrunner.gnm1.ann1.XY28YB Arachis hypogaea HOM05D000276 ORTHO05D006204 1.3e-47 194.5 356 39.3
Glyma.07G045800 Glycine max HOM05D000276 ORTHO05D006204 1.3e-47 194.5 326 42.0
Aqoxy4G00012 Aquilegia oxysepala HOM05D000276 ORTHO05D006204 6.3e-47 192.2 195 55.4
Lsat_1_v5_gn_1_39200 Lactuca sativa HOM05D000276 ORTHO05D006204 1.8e-46 190.7 312 46.2
Sed0020238 Sechium edule HOM05D000276 ORTHO05D006204 5.3e-46 189.1 319 43.3
SHI25222 Sapria himalayana HOM05D000276 ORTHO05D006204 9.1e-46 188.3 325 40.9
Atru.chr1.4141 Acer truncatum HOM05D000276 ORTHO05D006204 1.2e-45 188.0 346 39.6
COL.COLO4_30861 Corchorus olitorius HOM05D000276 ORTHO05D006204 5.9e-45 185.7 326 40.2
Lalb_Chr10g0101111 Lupinus albus HOM05D000276 ORTHO05D006204 1.7e-44 184.1 321 40.5
VMungo1309G2546 Vigna mungo HOM05D000276 ORTHO05D006204 2.2e-44 183.7 326 40.5
Lsat_1_v5_gn_4_92260 Lactuca sativa HOM05D000276 ORTHO05D006204 1.5e-43 181.0 327 39.8
Migut.I01129 Erythranthe guttata HOM05D000276 ORTHO05D006204 1.6e-42 177.6 318 39.9
Os11g0616300 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D006204 1.6e-42 177.6 318 41.5
unitig_749.g14034 Utricularia gibba HOM05D000276 ORTHO05D006204 2.1e-42 177.2 314 41.7
PGSC0003DMG400009148 Solanum tuberosum HOM05D000276 ORTHO05D006204 3.6e-42 176.4 158 58.9
Dinv20385 Davidia involucrata HOM05D000276 ORTHO05D003951 1.0e-41 174.9 351 38.2
ECA234G3069 Erigeron canadensis HOM05D000276 ORTHO05D006204 1.8e-41 174.1 306 40.8
Atru.chr1.4144 Acer truncatum HOM05D000276 ORTHO05D006204 2.3e-41 173.7 211 49.3
Carub.0001s4314 Capsella rubella HOM05D000276 ORTHO05D006204 8.8e-41 171.8 305 41.3
Phvul.009G261800 Phaseolus vulgaris HOM05D000276 ORTHO05D006204 8.8e-41 171.8 306 40.8
AL1G62570 Arabidopsis lyrata HOM05D000276 ORTHO05D006204 3.3e-40 169.9 310 39.7
AT1G53860 Arabidopsis thaliana HOM05D000276 ORTHO05D006204 5.7e-40 169.1 311 40.8
Cpa.g.sc25.188 Carica papaya HOM05D000276 ORTHO05D006204 1.1e-38 164.9 303 37.3
ATR0099G058 Amborella trichopoda HOM05D000276 ORTHO05D006204 7.0e-38 162.2 322 38.2
CARHR044190 Cardamine hirsuta HOM05D000276 ORTHO05D006204 2.7e-37 160.2 310 39.7
SEGI_36040 Sequoiadendron giganteum HOM05D000276 ORTHO05D006204 2.2e-36 157.1 404 35.1
CDE07G0856 Ceratophyllum demersum HOM05D000276 ORTHO05D006204 3.8e-36 156.4 287 39.4
Aa31LG10G1460 Aethionema arabicum HOM05D000276 ORTHO05D006204 4.2e-35 152.9 316 38.0
Sc15g0000800 Simmondsia chinensis HOM05D000276 ORTHO05D006204 4.2e-35 152.9 295 41.0
Thhalv10012249m.g Eutrema salsugineum HOM05D000276 ORTHO05D006204 6.1e-34 149.1 309 38.2
ECA247G2873 Erigeron canadensis HOM05D000276 ORTHO05D006204 1.0e-33 148.3 332 37.0
Lalb_Chr04g0253921 Lupinus albus HOM05D000276 ORTHO05D006204 1.4e-33 147.9 335 37.6
THA.LOC104810585 Tarenaya hassleriana HOM05D000276 ORTHO05D006204 1.4e-33 147.9 296 38.2
BcaB07g33286 Brassica carinata HOM05D000276 ORTHO05D006204 2.3e-33 147.1 308 37.7
Sp1g40350 Schrenkiella parvula HOM05D000276 ORTHO05D006204 5.2e-33 146.0 310 38.1
HanXRQChr10g0312011 Helianthus annuus HOM05D000276 ORTHO05D006204 1.2e-32 144.8 297 40.4
A05p17850 Brassica napus HOM05D000276 ORTHO05D006204 1.5e-32 144.4 307 38.4
BraA05t20675Z Brassica rapa HOM05D000276 ORTHO05D006204 1.5e-32 144.4 307 38.4
A06p00740 Brassica napus HOM05D000276 ORTHO05D003951 4.4e-32 142.9 305 37.0
BraA06t23308Z Brassica rapa HOM05D000276 ORTHO05D003951 4.4e-32 142.9 305 37.4
C06p15390 Brassica napus HOM05D000276 ORTHO05D003951 7.5e-32 142.1 306 37.9
BcaB02g10881 Brassica carinata HOM05D000276 ORTHO05D006204 3.7e-31 139.8 307 38.1
BcaC08g44139 Brassica carinata HOM05D000276 ORTHO05D003951 3.7e-31 139.8 307 38.4
BcaC08g43563 Brassica carinata HOM05D000276 ORTHO05D003951 1.8e-30 137.5 298 36.2
C06p09620 Brassica napus HOM05D000276 ORTHO05D003951 1.8e-30 137.5 298 36.2
BolC6t36034H Brassica oleracea HOM05D000276 ORTHO05D003951 1.8e-30 137.5 298 36.2
Lalb_Chr18g0044881 Lupinus albus HOM05D000276 ORTHO05D006204 3.1e-30 136.7 305 37.4
CAN.G521.8 Capsicum annuum HOM05D000276 ORTHO05D006204 3.8e-28 129.8 284 33.5
Hma1.2p1_0229F.1_g097050 Hydrangea macrophylla HOM05D000276 ORTHO05D006204 5.0e-28 129.4 211 42.7
HPP92_026319 Vanilla planifolia HOM05D000276 ORTHO05D006204 5.5e-27 125.9 203 42.4
HPP92_026318 Vanilla planifolia HOM05D000276 ORTHO05D006204 1.7e-23 114.4 97 64.9
Lsat_1_v5_gn_5_137881 Lactuca sativa HOM05D000276 ORTHO05D006204 2.8e-23 113.6 301 35.5
BolC6t36712H Brassica oleracea HOM05D000276 ORTHO05D006204 1.7e-20 104.4 272 33.8
SGA_v2.0_scaffold5371G54636 Striga asiatica HOM05D000276 ORTHO05D006204 2.9e-20 103.6 125 52.8
ECA247G0075 Erigeron canadensis HOM05D000903 ORTHO05D000731 2.0e-13 80.9 177 37.9
CDE06G1897 Ceratophyllum demersum HOM05D000276 ORTHO05D006204 7.8e-13 79.0 245 32.2
Carub.0005s0124 Capsella rubella HOM05D002431 ORTHO05D002543 2.8e-10 70.5 275 26.2
BcaC06g34069 Brassica carinata HOM05D002431 ORTHO05D002543 3.6e-10 70.1 278 26.6
BolC7t43817H Brassica oleracea HOM05D002431 ORTHO05D002543 3.6e-10 70.1 278 26.6
C07p33070 Brassica napus HOM05D002431 ORTHO05D002543 6.2e-10 69.3 278 26.6
AT2G02170 Arabidopsis thaliana HOM05D002431 ORTHO05D002543 1.4e-09 68.2 275 25.8
Thhalv10004200m.g Eutrema salsugineum HOM05D002431 ORTHO05D002543 3.1e-09 67.0 294 25.5
Pp3c9_7900 Physcomitrium patens HOM05D000276 ORTHO05D006204 3.1e-09 67.0 145 37.2
AagrBONN_evm.TU.Sc2ySwM_117.2369 Anthoceros agrestis HOM05D000276 ORTHO05D006204 5.2e-09 66.2 275 27.6
AL5G11450 Arabidopsis lyrata HOM05D002431 ORTHO05D002543 5.2e-09 66.2 283 25.4
BraA06t27253Z Brassica rapa HOM05D002431 ORTHO05D002543 1.2e-08 65.1 312 25.0
SEGI_21805 Sequoiadendron giganteum HOM05D002431 ORTHO05D002543 1.2e-08 65.1 329 26.1
A06p43750 Brassica napus HOM05D002431 ORTHO05D002543 1.5e-08 64.7 308 26.9
CDE05G1253 Ceratophyllum demersum HOM05D002431 ORTHO05D002543 4.4e-08 63.2 311 26.4
Oeu042062.1 Olea europaea HOM05D005632 ORTHO05D006870 5.8e-08 62.8 284 27.5
Sp2g13580 Schrenkiella parvula HOM05D002431 ORTHO05D002543 5.8e-08 62.8 298 24.5
EL10Ac6g15353 Beta vulgaris HOM05D002431 ORTHO05D002543 7.5e-08 62.4 294 24.8
BcaC06g31246 Brassica carinata HOM05D002431 ORTHO05D002543 7.5e-08 62.4 270 26.3
Pp3c15_4070 Physcomitrium patens HOM05D022548 ORTHO05D006204 7.5e-08 62.4 259 29.3
BcaB07g30352 Brassica carinata HOM05D002431 ORTHO05D002543 2.9e-07 60.5 266 27.1
BcaC03g17121 Brassica carinata HOM05D002431 ORTHO05D002543 2.9e-07 60.5 259 26.6
BolC2t11112H Brassica oleracea HOM05D002431 ORTHO05D002543 2.9e-07 60.5 259 26.6
CDE04G0609 Ceratophyllum demersum HOM05D002431 ORTHO05D002543 3.7e-07 60.1 314 27.4
arahy.Tifrunner.gnm1.ann1.H5LZNT Arachis hypogaea HOM05D002431 ORTHO05D002543 6.4e-07 59.3 286 25.5
Aqoxy5G03509 Aquilegia oxysepala HOM05D005632 ORTHO05D006870 1.4e-06 58.2 169 30.8
A08p24520 Brassica napus HOM05D002431 ORTHO05D002543 1.9e-06 57.8 277 25.6
Hma1.2p1_0586F.1_g183850 Hydrangea macrophylla HOM05D002431 ORTHO05D002543 1.9e-06 57.8 286 26.2
TAR374G0791 Trochodendron aralioides HOM05D005632 ORTHO05D006870 1.9e-06 57.8 264 25.4
AT1G30320 Arabidopsis thaliana HOM05D002431 ORTHO05D002543 2.4e-06 57.4 281 25.6
BcaC01g00183 Brassica carinata HOM05D002431 ORTHO05D002543 2.4e-06 57.4 277 25.3
C03p76670 Brassica napus HOM05D002431 ORTHO05D002543 2.4e-06 57.4 277 25.3
CSS0004223 Camellia sinensis var. sinensis HOM05D002431 ORTHO05D002543 2.4e-06 57.4 285 26.3
CARHR144840 Cardamine hirsuta HOM05D002431 ORTHO05D002543 2.4e-06 57.4 301 25.2
Cc11_g03240 Coffea canephora HOM05D002431 ORTHO05D002543 2.4e-06 57.4 327 26.0
ATR0618G051 Amborella trichopoda HOM05D002431 ORTHO05D002543 3.2e-06 57.0 334 24.9
arahy.Tifrunner.gnm1.ann1.PUF5Z4 Arachis hypogaea HOM05D002431 ORTHO05D002543 3.2e-06 57.0 288 25.3
C02p50300 Brassica napus HOM05D002431 ORTHO05D002543 3.2e-06 57.0 258 26.4
BraA08t34408Z Brassica rapa HOM05D002431 ORTHO05D002543 4.1e-06 56.6 277 25.3
Os02g0116800 Oryza sativa ssp. japonica HOM05D002431 ORTHO05D002543 4.1e-06 56.6 287 26.5
Zm00001eb209450 Zea mays HOM05D002431 ORTHO05D002543 4.1e-06 56.6 329 27.1
Psat7g086280 Pisum sativum HOM05D002431 ORTHO05D002543 5.4e-06 56.2 301 24.6
Potri.010G098000 Populus trichocarpa HOM05D002431 ORTHO05D002543 5.4e-06 56.2 323 25.1
SEGI_29969 Sequoiadendron giganteum HOM05D002431 ORTHO05D002543 5.4e-06 56.2 194 28.9
ATR1098G011 Amborella trichopoda HOM05D002431 ORTHO05D002543 7.0e-06 55.8 281 26.7
BolC3t19923H Brassica oleracea HOM05D002431 ORTHO05D002543 7.0e-06 55.8 277 25.3
Migut.E00242 Erythranthe guttata HOM05D005632 ORTHO05D006870 9.2e-06 55.5 274 27.4
Mapoly0107s0015 Marchantia polymorpha HOM05D000276 ORTHO05D006204 9.2e-06 55.5 185 29.7
Medtr8g080180 Medicago truncatula HOM05D005632 ORTHO05D006870 9.2e-06 55.5 267 25.5


User provided reference genes

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