Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 4.1e-63 245.4 154 100.0
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 8.1e-27 124.8 110 66.4
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 6.8e-26 121.7 110 61.8
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 1.2e-25 120.9 110 61.8
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 3.4e-25 119.4 109 62.4
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 4.4e-25 119.0 76 78.9
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 5.8e-25 118.6 107 60.7
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 1.3e-24 117.5 64 87.5
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 2.2e-24 116.7 97 62.9
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 2.2e-24 116.7 108 61.1
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 2.9e-24 116.3 68 82.4
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 3.7e-24 115.9 99 64.6
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 3.2e-23 112.8 95 64.2
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 4.1e-23 112.5 106 57.5
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 4.1e-23 112.5 71 77.5
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 4.1e-23 112.5 103 63.1
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 5.4e-23 112.1 107 57.0
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 5.4e-23 112.1 107 57.0
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 5.4e-23 112.1 107 57.0
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 5.4e-23 112.1 101 60.4
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 5.4e-23 112.1 86 68.6
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 9.2e-23 111.3 62 87.1
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 9.2e-23 111.3 99 61.6
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 9.2e-23 111.3 109 56.0
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 1.2e-22 110.9 104 58.7
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 1.2e-22 110.9 119 56.3
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 1.2e-22 110.9 104 58.7
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 1.2e-22 110.9 67 79.1
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 1.6e-22 110.5 64 82.8
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 2.1e-22 110.2 62 82.3
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.1e-22 110.2 62 85.5
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 2.1e-22 110.2 62 83.9
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 2.1e-22 110.2 62 83.9
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 2.1e-22 110.2 62 83.9
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 2.7e-22 109.8 77 74.0
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 2.7e-22 109.8 100 64.0
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 3.5e-22 109.4 62 83.9
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 3.5e-22 109.4 62 83.9
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 6.0e-22 108.6 113 56.6
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 6.0e-22 108.6 110 59.1
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 7.8e-22 108.2 103 62.1
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 7.8e-22 108.2 133 48.9
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 7.8e-22 108.2 107 54.2
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 7.8e-22 108.2 63 82.5
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 7.8e-22 108.2 109 55.0
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 1.0e-21 107.8 106 56.6
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 1.0e-21 107.8 98 60.2
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 1.0e-21 107.8 112 54.5
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 1.0e-21 107.8 98 62.2
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 1.3e-21 107.5 64 78.1
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 1.7e-21 107.1 103 56.3
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 1.7e-21 107.1 68 77.9
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 3.0e-21 106.3 64 79.7
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 3.0e-21 106.3 110 58.2
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 3.9e-21 105.9 62 80.6
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 3.9e-21 105.9 56 89.3
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 3.9e-21 105.9 106 57.5
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 5.1e-21 105.5 113 56.6
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 6.6e-21 105.1 104 55.8
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 6.6e-21 105.1 64 81.2
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.1e-20 104.4 93 62.4
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 1.1e-20 104.4 59 84.7
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 1.5e-20 104.0 58 86.2
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 2.5e-20 103.2 94 58.5
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 3.3e-20 102.8 62 79.0
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 3.3e-20 102.8 56 87.5
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 4.3e-20 102.4 105 56.2
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 5.6e-20 102.1 61 80.3
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 1.2e-19 100.9 62 79.0
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 1.2e-19 100.9 72 73.6
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 1.2e-19 100.9 64 78.1
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 1.6e-19 100.5 74 66.2
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 2.1e-19 100.1 55 85.5
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 3.6e-19 99.4 62 79.0
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 6.2e-19 98.6 77 70.1
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 6.2e-19 98.6 105 54.3
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 1.4e-18 97.4 55 83.6
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 1.8e-18 97.1 105 53.3
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 2.3e-18 96.7 53 86.8
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 2.3e-18 96.7 59 81.4
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 3.1e-18 96.3 60 80.0
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 4.0e-18 95.9 116 52.6
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 5.2e-18 95.5 62 74.2
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 5.2e-18 95.5 106 55.7
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 5.2e-18 95.5 96 56.2
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 4.4e-17 92.4 62 75.8
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 5.8e-17 92.0 84 61.9
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 7.6e-17 91.7 85 56.5
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 8.4e-16 88.2 112 50.0
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.4e-15 87.4 89 58.4
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 7.1e-15 85.1 60 68.3
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 7.1e-15 85.1 78 55.1
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 7.8e-14 81.6 109 47.7
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 5.1e-13 79.0 75 58.7
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 4.0e-10 69.3 104 42.3


User provided reference genes

Program Settings