Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 2.9e-262 907.9 428 100.0
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 3.3e-165 585.5 379 69.4
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 1.4e-163 580.1 406 65.8
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 4.1e-163 578.6 388 68.6
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 9.1e-163 577.4 361 71.7
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 1.5e-162 576.6 373 70.0
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 7.7e-162 574.3 363 71.3
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 1.7e-161 573.2 386 66.6
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 3.8e-161 572.0 440 63.0
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 1.6e-159 566.6 372 69.4
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 2.1e-159 566.2 398 66.3
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 2.7e-159 565.8 366 68.9
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 6.1e-159 564.7 415 63.9
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 1.0e-158 563.9 389 66.8
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 1.4e-158 563.5 373 68.6
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 2.3e-158 562.8 381 65.9
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 3.9e-158 562.0 368 66.8
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 3.9e-158 562.0 355 70.4
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 6.7e-158 561.2 366 69.1
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.1e-157 560.5 366 69.1
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 1.5e-157 560.1 394 65.5
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 2.6e-157 559.3 362 68.5
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 3.3e-157 558.9 386 65.8
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 3.3e-157 558.9 366 68.9
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 3.3e-157 558.9 384 66.9
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 4.4e-157 558.5 369 68.3
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 9.7e-157 557.4 389 66.3
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 9.7e-157 557.4 362 68.8
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 1.3e-156 557.0 391 65.2
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 1.3e-156 557.0 368 68.2
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.7e-156 556.6 366 68.3
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 2.2e-156 556.2 401 62.8
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 3.7e-156 555.4 367 68.7
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 8.2e-156 554.3 387 65.9
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 1.4e-155 553.5 363 67.5
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 2.4e-155 552.7 425 60.9
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 3.1e-155 552.4 379 65.2
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 4.1e-155 552.0 361 68.4
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 4.1e-155 552.0 360 67.5
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 5.3e-155 551.6 363 68.0
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 9.1e-155 550.8 368 67.4
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 1.2e-154 550.4 363 68.3
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 1.2e-154 550.4 398 63.6
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 1.6e-154 550.1 364 68.7
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 3.5e-154 548.9 368 65.8
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 7.7e-154 547.7 385 66.0
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 7.7e-154 547.7 375 66.4
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 7.7e-154 547.7 361 68.4
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 1.3e-153 547.0 358 68.2
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 2.2e-153 546.2 362 68.8
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 3.8e-153 545.4 344 70.9
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 3.8e-153 545.4 368 66.8
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 1.5e-152 543.5 392 64.8
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 1.9e-152 543.1 378 64.8
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 3.2e-152 542.3 361 67.0
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 5.5e-152 541.6 401 62.1
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 5.5e-152 541.6 401 60.1
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 7.2e-152 541.2 372 64.5
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 1.0e-150 537.3 378 63.8
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 5.2e-150 535.0 362 66.9
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 1.5e-149 533.5 385 63.4
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 3.3e-149 532.3 476 55.5
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 7.5e-149 531.2 386 63.7
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 3.1e-147 525.8 424 58.7
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 5.3e-147 525.0 388 61.3
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 5.9e-146 521.5 369 64.5
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 8.5e-145 517.7 424 59.0
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 5.5e-144 515.0 368 64.1
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 2.1e-143 513.1 362 64.6
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 5.2e-142 508.4 391 61.9
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 2.0e-141 506.5 372 64.2
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 7.5e-141 504.6 399 60.9
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 1.7e-140 503.4 364 62.6
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 2.2e-140 503.1 360 64.4
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 4.8e-140 501.9 371 62.8
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 6.3e-140 501.5 369 64.0
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 8.3e-140 501.1 360 62.2
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 1.4e-139 500.4 327 70.3
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 1.8e-139 500.0 369 64.0
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 2.4e-139 499.6 399 59.9
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 7.0e-139 498.0 359 63.5
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 1.2e-138 497.3 375 62.1
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 1.2e-138 497.3 375 62.1
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 2.7e-138 496.1 342 67.8
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 2.7e-138 496.1 427 55.0
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 5.0e-137 491.9 370 63.8
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 1.1e-136 490.7 344 63.4
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 1.9e-136 490.0 369 62.6
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 6.1e-135 485.0 331 65.9
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 3.0e-134 482.6 321 67.6
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 1.3e-129 467.2 362 59.1
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 1.7e-129 466.8 366 60.7
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 4.7e-127 458.8 360 58.9
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 8.9e-126 454.5 305 67.5
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 4.4e-125 452.2 318 65.7
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 6.0e-122 441.8 390 54.4
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 3.0e-121 439.5 285 67.7
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 3.7e-116 422.5 372 50.0
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 8.3e-116 421.4 285 67.0
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 1.6e-114 417.2 389 50.6
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 2.7e-114 416.4 372 49.5
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 5.8e-101 372.1 372 46.8
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 5.3e-94 349.0 260 64.6
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 3.5e-90 336.3 272 61.0
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 6.0e-90 335.5 221 71.0
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 1.1e-86 324.7 358 45.5
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 6.7e-73 278.9 367 42.2
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 7.4e-72 275.4 352 44.3
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 9.0e-62 241.9 238 54.2
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 2.5e-59 233.8 186 57.5
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 1.8e-54 217.6 468 30.3
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 3.0e-49 200.3 190 52.1
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 1.2e-45 188.3 235 40.0
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 5.0e-44 183.0 129 62.0
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 2.6e-32 144.1 102 56.9
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 1.4e-22 111.7 203 32.5
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 1.6e-21 108.2 75 60.0
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 3.8e-20 103.6 90 55.6
SEGI_13868 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 3.0e-17 94.0 65 72.3
Gohir.A01G088200 Gossypium hirsutum HOM05D006474 ORTHO05D007994 9.8e-16 89.0 55 72.7
Thecc.09G192500 Theobroma cacao HOM05D006474 ORTHO05D007994 1.7e-15 88.2 63 65.1
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 9.2e-14 82.4 63 57.1
SEGI_25707 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 1.1e-11 75.5 64 51.6
Gohir.A05G306101 Gossypium hirsutum HOM05D005508 ORTHO05D007994 1.2e-08 65.5 38 73.7
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 3.4e-08 63.9 51 62.7
Gohir.A06G077600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 3.2e-06 57.4 74 50.0


User provided reference genes

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