Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010264 Vanilla planifolia HOM05D002201 ORTHO05D007560 1.7e-74 282.7 154 100.0
HPP92_010259 Vanilla planifolia HOM05D002201 ORTHO05D007560 3.7e-74 281.6 153 99.3
HPP92_010261 Vanilla planifolia HOM05D002201 ORTHO05D007560 3.7e-74 281.6 153 99.3
HPP92_010273 Vanilla planifolia HOM05D002201 ORTHO05D007560 5.0e-71 271.2 153 96.1
HPP92_010105 Vanilla planifolia HOM05D002201 ORTHO05D007560 1.6e-64 249.6 152 91.4
HPP92_010266 Vanilla planifolia HOM05D002201 ORTHO05D007560 4.2e-62 241.5 137 94.9
MBI16_g33830_MAGBIO Magnolia biondii HOM05D002201 ORTHO05D007560 2.9e-26 122.5 153 46.4
TAR629G2041 Trochodendron aralioides HOM05D002201 ORTHO05D007560 1.1e-25 120.6 153 44.4
PGR119G1960 Punica granatum HOM05D002201 ORTHO05D007560 4.6e-24 115.2 153 41.2
PSO063G3066 Papaver somniferum HOM05D002201 ORTHO05D007560 1.3e-23 113.6 153 43.1
CANSAT64G2925 Cannabis sativa HOM05D002201 ORTHO05D007560 6.6e-23 111.3 153 41.2
Atru.chr11.1374 Acer truncatum HOM05D002201 ORTHO05D007560 1.5e-22 110.2 153 43.1
arahy.Tifrunner.gnm1.ann1.D2MQ0U Arachis hypogaea HOM05D002201 ORTHO05D007560 1.5e-22 110.2 153 42.5
arahy.Tifrunner.gnm1.ann1.60XZVP Arachis hypogaea HOM05D002201 ORTHO05D007560 4.3e-22 108.6 153 41.8
Cpa.g.c29023.2 Carica papaya HOM05D002201 ORTHO05D007560 4.3e-22 108.6 153 39.2
QL01p001010 Quercus lobata HOM05D002201 ORTHO05D007560 4.3e-22 108.6 153 41.2
Aqoxy3G03893 Aquilegia oxysepala HOM05D002201 ORTHO05D007560 1.3e-21 107.1 153 41.8
CiPaw.15G002600 Carya illinoinensis HOM05D002201 ORTHO05D007560 1.3e-21 107.1 153 39.9
Manes.14G096500 Manihot esculenta HOM05D002201 ORTHO05D007560 1.3e-21 107.1 153 43.8
Cfa018644 Carpinus fangiana HOM05D002201 ORTHO05D007560 2.1e-21 106.3 153 39.2
Haze_17425 Corylus avellana HOM05D002201 ORTHO05D007560 2.8e-21 105.9 153 39.2
Prupe.1G304100 Prunus persica HOM05D002201 ORTHO05D007560 2.8e-21 105.9 153 41.2
Lalb_Chr17g0341861 Lupinus albus HOM05D002201 ORTHO05D007560 6.2e-21 104.8 153 41.2
Dinv05805 Davidia involucrata HOM05D002201 ORTHO05D007560 8.1e-21 104.4 153 41.8
Duzib248G1574 Durio zibethinus HOM05D002201 ORTHO05D007560 8.1e-21 104.4 152 40.1
Lj3C1021T1 Lonicera japonica HOM05D002201 ORTHO05D007560 1.4e-20 103.6 153 41.2
GSVIVG01011967001 Vitis vinifera HOM05D002201 ORTHO05D007560 1.4e-20 103.6 153 41.2
Thhalv10003928m.g Eutrema salsugineum HOM05D002201 ORTHO05D007560 1.8e-20 103.2 153 39.9
Phvul.003G026000 Phaseolus vulgaris HOM05D002201 ORTHO05D007560 1.8e-20 103.2 153 38.6
COL.COLO4_07858 Corchorus olitorius HOM05D000566 ORTHO05D000686 2.4e-20 102.8 153 39.2
Manes.06G073300 Manihot esculenta HOM05D002201 ORTHO05D007560 2.4e-20 102.8 153 41.2
FvH4_4g28210 Fragaria vesca HOM05D002201 ORTHO05D007560 3.1e-20 102.4 153 39.9
Ca_05686_v3 Cicer arietinum L. HOM05D002201 ORTHO05D007560 4.0e-20 102.1 153 39.9
Cc11_g10720 Coffea canephora HOM05D002201 ORTHO05D007560 4.0e-20 102.1 153 39.9
FAN12G2404 Fragaria x ananassa HOM05D002201 ORTHO05D007560 4.0e-20 102.1 153 39.9
FAN17G2361 Fragaria x ananassa HOM05D002201 ORTHO05D007560 4.0e-20 102.1 153 39.2
Hma1.2p1_0862F.1_g229850 Hydrangea macrophylla HOM05D002201 ORTHO05D007560 4.0e-20 102.1 153 39.9
Lj2g0021982 Lotus japonicus HOM05D002201 ORTHO05D007560 6.9e-20 101.3 153 41.8
AT3G25680 Arabidopsis thaliana HOM05D002201 ORTHO05D007560 9.0e-20 100.9 153 37.9
VMungo1215G1906 Vigna mungo HOM05D002201 ORTHO05D007560 9.0e-20 100.9 153 39.2
FAN07G1361 Fragaria x ananassa HOM05D002201 ORTHO05D007560 1.2e-19 100.5 153 39.2
HanXRQChr12g0365331 Helianthus annuus HOM05D002201 ORTHO05D007560 1.5e-19 100.1 153 39.2
Thecc.02G362600 Theobroma cacao HOM05D002201 ORTHO05D007560 1.5e-19 100.1 153 38.6
CAN.G184.77 Capsicum annuum HOM05D002201 ORTHO05D007560 2.0e-19 99.8 153 39.2
Glyma.02G101200 Glycine max HOM05D002201 ORTHO05D007560 2.0e-19 99.8 153 39.9
MD16G1049600 Malus domestica HOM05D002201 ORTHO05D007560 2.0e-19 99.8 153 38.6
TPR.G2697 Trifolium pratense HOM05D002201 ORTHO05D007560 2.0e-19 99.8 153 41.2
BcaB07g30634 Brassica carinata HOM05D002201 ORTHO05D007560 2.6e-19 99.4 153 38.6
CSS0023752 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D000686 2.6e-19 99.4 153 40.5
Gohir.D12G174400 Gossypium hirsutum HOM05D002201 ORTHO05D007560 2.6e-19 99.4 153 37.3
Gorai.008G187100 Gossypium raimondii HOM05D002201 ORTHO05D007560 2.6e-19 99.4 153 37.3
ECA233G2653 Erigeron canadensis HOM05D002201 ORTHO05D007560 3.4e-19 99.0 153 39.2
SalBow8G3742 Salvia bowleyana HOM05D002201 ORTHO05D007560 4.4e-19 98.6 153 39.2
Sc04g0006800 Simmondsia chinensis HOM05D002201 ORTHO05D007560 4.4e-19 98.6 153 39.9
A09p24930 Brassica napus HOM05D002201 ORTHO05D007560 7.6e-19 97.8 153 37.9
BraA09t38081Z Brassica rapa HOM05D002201 ORTHO05D007560 7.6e-19 97.8 153 37.9
Ciclev10031108m.g Citrus clementina HOM05D002201 ORTHO05D007560 7.6e-19 97.8 153 41.8
Actinidia38400 Actinidia chinensis HOM05D002201 ORTHO05D007560 9.9e-19 97.4 153 39.2
BcaC04g21422 Brassica carinata HOM05D002201 ORTHO05D007560 1.3e-18 97.1 153 37.9
C09p31960 Brassica napus HOM05D002201 ORTHO05D007560 1.3e-18 97.1 153 37.9
BolC9t56050H Brassica oleracea HOM05D002201 ORTHO05D007560 1.3e-18 97.1 153 37.9
Sp2g14940 Schrenkiella parvula HOM05D002201 ORTHO05D007560 1.3e-18 97.1 153 37.3
TWI75G0366 Tripterygium wilfordii HOM05D002201 ORTHO05D007560 1.3e-18 97.1 153 37.9
Glyma.01G089500 Glycine max HOM05D002201 ORTHO05D007560 1.7e-18 96.7 153 38.6
Medtr5g053260 Medicago truncatula HOM05D002201 ORTHO05D007560 2.2e-18 96.3 153 39.9
ATR0053G012 Amborella trichopoda HOM05D002201 ORTHO05D007560 2.9e-18 95.9 151 41.1
MSTRG.13500 Avicennia marina HOM05D002201 ORTHO05D007560 4.9e-18 95.1 153 37.3
Potri.010G131000 Populus trichocarpa HOM05D002201 ORTHO05D007560 4.9e-18 95.1 153 36.6
RcHm_v2.0_Chr4g0435981 Rosa chinensis HOM05D002201 ORTHO05D007560 6.4e-18 94.7 153 37.9
CDE10G0618 Ceratophyllum demersum HOM05D002201 ORTHO05D007560 8.4e-18 94.4 151 39.7
Eucgr.G02358 Eucalyptus grandis HOM05D002201 ORTHO05D007560 8.4e-18 94.4 153 37.3
Gohir.A12G172000 Gossypium hirsutum HOM05D002201 ORTHO05D007560 8.4e-18 94.4 153 35.9
Oeu024102.2 Olea europaea HOM05D002201 ORTHO05D007560 8.4e-18 94.4 153 38.6
Nn4g23699 Nelumbo nucifera HOM05D002201 ORTHO05D007560 1.1e-17 94.0 135 43.0
Psat2g090640 Pisum sativum HOM05D002201 ORTHO05D007560 1.1e-17 94.0 153 39.2
Zm00001eb281400 Zea mays HOM05D002201 ORTHO05D007560 1.1e-17 94.0 153 36.6
AL5G14220 Arabidopsis lyrata HOM05D002201 ORTHO05D007560 1.4e-17 93.6 153 36.6
Lalb_Chr04g0254971 Lupinus albus HOM05D002201 ORTHO05D007560 1.9e-17 93.2 153 37.9
MD13G1047900 Malus domestica HOM05D002201 ORTHO05D007560 3.2e-17 92.4 153 37.3
PGSC0003DMG400000804 Solanum tuberosum HOM05D002201 ORTHO05D007560 5.4e-17 91.7 153 37.3
Solyc05g009940.4 Solanum lycopersicum HOM05D002201 ORTHO05D007560 7.1e-17 91.3 153 37.9
Lsat_1_v5_gn_8_37461 Lactuca sativa HOM05D002201 ORTHO05D007560 9.3e-17 90.9 152 38.8
Peaxi162Scf00367g00735 Petunia axillaris HOM05D002201 ORTHO05D007560 1.2e-16 90.5 153 40.5
AUR62002931 Chenopodium quinoa HOM05D002201 ORTHO05D007560 2.1e-16 89.7 153 37.3
THA.LOC104825717 Tarenaya hassleriana HOM05D002201 ORTHO05D007560 2.1e-16 89.7 153 37.3
AUR62007741 Chenopodium quinoa HOM05D002201 ORTHO05D007560 2.7e-16 89.4 153 37.3
Sabra10G0099800 Salix brachista HOM05D002201 ORTHO05D007560 3.5e-16 89.0 153 35.3
Sopen05g005750 Solanum pennellii HOM05D002201 ORTHO05D007560 3.5e-16 89.0 153 37.3
Actinidia13681 Actinidia chinensis HOM05D002201 ORTHO05D007560 4.6e-16 88.6 153 37.9
Rhsim12G0080800 Rhododendron simsii HOM05D002201 ORTHO05D007560 7.9e-16 87.8 153 37.9
Carub.0005s0350 Capsella rubella HOM05D002201 ORTHO05D007560 1.0e-15 87.4 153 35.3
SGA_v2.0_scaffold14G06814 Striga asiatica HOM05D002201 ORTHO05D007560 1.7e-15 86.7 153 35.3
Migut.E00290 Erythranthe guttata HOM05D002201 ORTHO05D007560 3.3e-14 82.4 159 35.2
vmacro01361 Vaccinium macrocarpon HOM05D002201 ORTHO05D007560 4.3e-14 82.0 153 36.6
ClCG05G023090 Citrullus lanatus HOM05D002201 ORTHO05D007560 9.6e-14 80.9 128 35.9
Hund25106 Selenicereus undatus HOM05D002201 ORTHO05D007560 9.6e-14 80.9 123 40.7
Sed0021770 Sechium edule HOM05D000566 ORTHO05D000686 1.6e-13 80.1 123 36.6
EL10Ac6g14517 Beta vulgaris HOM05D002201 ORTHO05D007560 1.8e-12 76.6 153 32.0
MELO3C012208.2 Cucumis melo HOM05D002201 ORTHO05D007560 9.0e-12 74.3 110 38.2
Aa31LG1G6710 Aethionema arabicum HOM05D002201 ORTHO05D007560 1.5e-11 73.6 123 36.6
Aa31LG2G6630 Aethionema arabicum HOM05D002201 ORTHO05D007560 5.8e-11 71.6 121 37.2
CsaV3_5G033900 Cucumis sativus L. HOM05D002201 ORTHO05D007560 7.6e-11 71.2 109 35.8
TWI79G0162 Tripterygium wilfordii HOM05D002201 ORTHO05D007560 2.7e-08 62.8 90 40.0


User provided reference genes

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