Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010259 Vanilla planifolia HOM05D002201 ORTHO05D007560 9.4e-99 363.6 196 100.0
HPP92_010273 Vanilla planifolia HOM05D002201 ORTHO05D007560 1.3e-95 353.2 196 97.4
HPP92_010105 Vanilla planifolia HOM05D002201 ORTHO05D007560 1.8e-86 322.8 196 91.8
HPP92_010261 Vanilla planifolia HOM05D002201 ORTHO05D007560 3.6e-74 282.0 155 98.7
HPP92_010264 Vanilla planifolia HOM05D002201 ORTHO05D007560 1.1e-73 280.4 153 99.3
HPP92_010266 Vanilla planifolia HOM05D002201 ORTHO05D007560 4.1e-62 241.9 137 95.6
MBI16_g33830_MAGBIO Magnolia biondii HOM05D002201 ORTHO05D007560 1.5e-35 153.7 178 50.0
TAR629G2041 Trochodendron aralioides HOM05D002201 ORTHO05D007560 1.8e-33 146.7 177 46.3
PGR119G1960 Punica granatum HOM05D002201 ORTHO05D007560 3.4e-32 142.5 178 43.8
PSO063G3066 Papaver somniferum HOM05D002201 ORTHO05D007560 7.6e-32 141.4 178 46.1
QL01p001010 Quercus lobata HOM05D002201 ORTHO05D007560 1.7e-31 140.2 183 44.3
Atru.chr11.1374 Acer truncatum HOM05D002201 ORTHO05D007560 2.9e-31 139.4 178 45.5
CANSAT64G2925 Cannabis sativa HOM05D002201 ORTHO05D007560 6.4e-31 138.3 177 43.5
arahy.Tifrunner.gnm1.ann1.D2MQ0U Arachis hypogaea HOM05D002201 ORTHO05D007560 1.1e-30 137.5 178 44.9
Cpa.g.c29023.2 Carica papaya HOM05D002201 ORTHO05D007560 1.4e-30 137.1 178 42.1
arahy.Tifrunner.gnm1.ann1.60XZVP Arachis hypogaea HOM05D002201 ORTHO05D007560 3.2e-30 136.0 178 44.4
Manes.14G096500 Manihot esculenta HOM05D002201 ORTHO05D007560 4.2e-30 135.6 178 46.1
Aqoxy3G03893 Aquilegia oxysepala HOM05D002201 ORTHO05D007560 7.1e-30 134.8 178 44.9
CiPaw.15G002600 Carya illinoinensis HOM05D002201 ORTHO05D007560 9.3e-30 134.4 178 42.1
Prupe.1G304100 Prunus persica HOM05D002201 ORTHO05D007560 9.3e-30 134.4 178 43.8
Lj3C1021T1 Lonicera japonica HOM05D002201 ORTHO05D007560 2.7e-29 132.9 178 43.3
FAN17G2361 Fragaria x ananassa HOM05D002201 ORTHO05D007560 4.6e-29 132.1 183 41.5
GSVIVG01011967001 Vitis vinifera HOM05D002201 ORTHO05D007560 6.0e-29 131.7 178 43.8
FvH4_4g28210 Fragaria vesca HOM05D002201 ORTHO05D007560 7.9e-29 131.3 180 42.2
FAN12G2404 Fragaria x ananassa HOM05D002201 ORTHO05D007560 1.0e-28 131.0 180 42.2
Lalb_Chr17g0341861 Lupinus albus HOM05D002201 ORTHO05D007560 1.0e-28 131.0 178 43.3
Phvul.003G026000 Phaseolus vulgaris HOM05D002201 ORTHO05D007560 1.0e-28 131.0 178 42.1
Dinv05805 Davidia involucrata HOM05D002201 ORTHO05D007560 1.3e-28 130.6 178 43.3
CAN.G184.77 Capsicum annuum HOM05D002201 ORTHO05D007560 1.8e-28 130.2 178 43.3
Hma1.2p1_0862F.1_g229850 Hydrangea macrophylla HOM05D002201 ORTHO05D007560 1.8e-28 130.2 178 42.1
Thhalv10003928m.g Eutrema salsugineum HOM05D002201 ORTHO05D007560 2.3e-28 129.8 178 42.1
FAN07G1361 Fragaria x ananassa HOM05D002201 ORTHO05D007560 2.3e-28 129.8 183 41.5
Lj2g0021982 Lotus japonicus HOM05D002201 ORTHO05D007560 2.3e-28 129.8 178 44.4
Manes.06G073300 Manihot esculenta HOM05D002201 ORTHO05D007560 2.3e-28 129.8 178 43.3
MD16G1049600 Malus domestica HOM05D002201 ORTHO05D007560 3.0e-28 129.4 178 42.1
SalBow8G3742 Salvia bowleyana HOM05D002201 ORTHO05D007560 3.9e-28 129.0 178 43.3
Thecc.02G362600 Theobroma cacao HOM05D002201 ORTHO05D007560 5.1e-28 128.6 178 41.6
VMungo1215G1906 Vigna mungo HOM05D002201 ORTHO05D007560 6.7e-28 128.3 178 42.1
AT3G25680 Arabidopsis thaliana HOM05D002201 ORTHO05D007560 8.7e-28 127.9 178 40.4
Cc11_g10720 Coffea canephora HOM05D002201 ORTHO05D007560 8.7e-28 127.9 178 41.0
Gohir.D12G174400 Gossypium hirsutum HOM05D002201 ORTHO05D007560 8.7e-28 127.9 178 40.4
Gorai.008G187100 Gossypium raimondii HOM05D002201 ORTHO05D007560 8.7e-28 127.9 178 40.4
HanXRQChr12g0365331 Helianthus annuus HOM05D002201 ORTHO05D007560 1.1e-27 127.5 183 41.0
Glyma.02G101200 Glycine max HOM05D002201 ORTHO05D007560 1.5e-27 127.1 178 42.7
MSTRG.13500 Avicennia marina HOM05D002201 ORTHO05D007560 1.9e-27 126.7 178 42.1
Ciclev10031108m.g Citrus clementina HOM05D002201 ORTHO05D007560 2.5e-27 126.3 178 43.8
BcaB07g30634 Brassica carinata HOM05D002201 ORTHO05D007560 3.3e-27 125.9 178 41.0
Ca_05686_v3 Cicer arietinum L. HOM05D002201 ORTHO05D007560 3.3e-27 125.9 178 41.6
COL.COLO4_07858 Corchorus olitorius HOM05D000566 ORTHO05D000686 3.3e-27 125.9 172 41.9
ECA233G2653 Erigeron canadensis HOM05D002201 ORTHO05D007560 5.6e-27 125.2 178 41.6
A09p24930 Brassica napus HOM05D002201 ORTHO05D007560 9.6e-27 124.4 178 40.4
BraA09t38081Z Brassica rapa HOM05D002201 ORTHO05D007560 9.6e-27 124.4 178 40.4
Sc04g0006800 Simmondsia chinensis HOM05D002201 ORTHO05D007560 9.6e-27 124.4 178 41.0
Glyma.01G089500 Glycine max HOM05D002201 ORTHO05D007560 1.3e-26 124.0 178 41.6
BcaC04g21422 Brassica carinata HOM05D002201 ORTHO05D007560 1.6e-26 123.6 178 40.4
C09p31960 Brassica napus HOM05D002201 ORTHO05D007560 1.6e-26 123.6 178 40.4
BolC9t56050H Brassica oleracea HOM05D002201 ORTHO05D007560 1.6e-26 123.6 178 40.4
Sp2g14940 Schrenkiella parvula HOM05D002201 ORTHO05D007560 1.6e-26 123.6 178 40.4
TPR.G2697 Trifolium pratense HOM05D002201 ORTHO05D007560 1.6e-26 123.6 178 42.7
Zm00001eb281400 Zea mays HOM05D002201 ORTHO05D007560 1.6e-26 123.6 179 38.5
Gohir.A12G172000 Gossypium hirsutum HOM05D002201 ORTHO05D007560 2.8e-26 122.9 178 39.3
RcHm_v2.0_Chr4g0435981 Rosa chinensis HOM05D002201 ORTHO05D007560 2.8e-26 122.9 178 40.4
CDE10G0618 Ceratophyllum demersum HOM05D002201 ORTHO05D007560 3.7e-26 122.5 176 42.6
Potri.010G131000 Populus trichocarpa HOM05D002201 ORTHO05D007560 3.7e-26 122.5 178 39.3
CSS0023752 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D000686 4.8e-26 122.1 172 42.4
Oeu024102.2 Olea europaea HOM05D002201 ORTHO05D007560 4.8e-26 122.1 178 41.6
PGSC0003DMG400000804 Solanum tuberosum HOM05D002201 ORTHO05D007560 4.8e-26 122.1 178 41.6
TWI75G0366 Tripterygium wilfordii HOM05D002201 ORTHO05D007560 4.8e-26 122.1 178 39.9
AL5G14220 Arabidopsis lyrata HOM05D002201 ORTHO05D007560 6.2e-26 121.7 178 39.9
Eucgr.G02358 Eucalyptus grandis HOM05D002201 ORTHO05D007560 6.2e-26 121.7 178 40.4
MD13G1047900 Malus domestica HOM05D002201 ORTHO05D007560 1.1e-25 120.9 178 40.4
ATR0053G012 Amborella trichopoda HOM05D002201 ORTHO05D007560 1.4e-25 120.6 184 41.3
Lalb_Chr04g0254971 Lupinus albus HOM05D002201 ORTHO05D007560 1.4e-25 120.6 178 41.0
Peaxi162Scf00367g00735 Petunia axillaris HOM05D002201 ORTHO05D007560 1.4e-25 120.6 178 44.4
Solyc05g009940.4 Solanum lycopersicum HOM05D002201 ORTHO05D007560 1.4e-25 120.6 178 41.6
Haze_17425 Corylus avellana HOM05D002201 ORTHO05D007560 1.8e-25 120.2 204 36.8
Medtr5g053260 Medicago truncatula HOM05D002201 ORTHO05D007560 1.8e-25 120.2 178 41.6
Cfa018644 Carpinus fangiana HOM05D002201 ORTHO05D007560 5.3e-25 118.6 209 35.9
Psat2g090640 Pisum sativum HOM05D002201 ORTHO05D007560 6.9e-25 118.2 178 41.0
Sopen05g005750 Solanum pennellii HOM05D002201 ORTHO05D007560 6.9e-25 118.2 178 41.0
Lsat_1_v5_gn_8_37461 Lactuca sativa HOM05D002201 ORTHO05D007560 1.2e-24 117.5 177 41.2
Sabra10G0099800 Salix brachista HOM05D002201 ORTHO05D007560 1.2e-24 117.5 178 38.8
Actinidia13681 Actinidia chinensis HOM05D002201 ORTHO05D007560 2.0e-24 116.7 178 40.4
AUR62002931 Chenopodium quinoa HOM05D002201 ORTHO05D007560 3.4e-24 115.9 178 38.8
SGA_v2.0_scaffold14G06814 Striga asiatica HOM05D002201 ORTHO05D007560 3.4e-24 115.9 178 39.3
Rhsim12G0080800 Rhododendron simsii HOM05D002201 ORTHO05D007560 5.8e-24 115.2 178 39.9
AUR62007741 Chenopodium quinoa HOM05D002201 ORTHO05D007560 7.6e-24 114.8 178 38.8
THA.LOC104825717 Tarenaya hassleriana HOM05D002201 ORTHO05D007560 7.6e-24 114.8 178 39.3
Carub.0005s0350 Capsella rubella HOM05D002201 ORTHO05D007560 1.0e-23 114.4 178 38.8
Nn4g23699 Nelumbo nucifera HOM05D002201 ORTHO05D007560 1.3e-23 114.0 178 40.4
Migut.E00290 Erythranthe guttata HOM05D002201 ORTHO05D007560 3.2e-22 109.4 184 38.6
vmacro01361 Vaccinium macrocarpon HOM05D002201 ORTHO05D007560 1.2e-21 107.5 178 38.2
ClCG05G023090 Citrullus lanatus HOM05D002201 ORTHO05D007560 1.0e-20 104.4 178 35.4
Duzib248G1574 Durio zibethinus HOM05D002201 ORTHO05D007560 3.9e-20 102.4 152 40.1
EL10Ac6g14517 Beta vulgaris HOM05D002201 ORTHO05D007560 5.1e-20 102.1 178 34.3
Sed0021770 Sechium edule HOM05D000566 ORTHO05D000686 1.6e-18 97.1 183 34.4
Actinidia38400 Actinidia chinensis HOM05D002201 ORTHO05D007560 2.2e-18 96.7 153 39.2
MELO3C012208.2 Cucumis melo HOM05D002201 ORTHO05D007560 5.5e-14 82.0 178 30.9
CsaV3_5G033900 Cucumis sativus L. HOM05D002201 ORTHO05D007560 1.2e-13 80.9 178 29.8
Hund25106 Selenicereus undatus HOM05D002201 ORTHO05D007560 1.2e-13 80.9 123 40.7
Aa31LG2G6630 Aethionema arabicum HOM05D002201 ORTHO05D007560 6.7e-12 75.1 178 31.5
SEGI_16530 Sequoiadendron giganteum HOM05D002201 ORTHO05D007560 1.5e-11 73.9 175 25.1
SEGI_37768 Sequoiadendron giganteum HOM05D002201 ORTHO05D007560 1.5e-11 73.9 175 25.1
Aa31LG1G6710 Aethionema arabicum HOM05D002201 ORTHO05D007560 5.7e-11 72.0 123 35.8
Nitab4.5_0005803g0050 Nicotiana tabacum HOM05D002201 ORTHO05D007560 1.7e-10 70.5 89 47.2
Nitab4.5_0004705g0030 Nicotiana tabacum HOM05D002201 ORTHO05D007560 2.2e-10 70.1 87 48.3
TWI79G0162 Tripterygium wilfordii HOM05D002201 ORTHO05D007560 3.4e-08 62.8 90 40.0


User provided reference genes

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