Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010105 Vanilla planifolia HOM05D002201 ORTHO05D007560 3.6e-118 428.3 229 100.0
HPP92_010273 Vanilla planifolia HOM05D002201 ORTHO05D007560 8.4e-107 390.6 233 91.8
HPP92_010259 Vanilla planifolia HOM05D002201 ORTHO05D007560 1.7e-86 323.2 196 91.8
HPP92_010261 Vanilla planifolia HOM05D002201 ORTHO05D007560 1.4e-64 250.4 188 78.7
HPP92_010264 Vanilla planifolia HOM05D002201 ORTHO05D007560 3.0e-64 249.2 152 91.4
HPP92_010266 Vanilla planifolia HOM05D002201 ORTHO05D007560 2.4e-53 213.0 137 87.6
TAR629G2041 Trochodendron aralioides HOM05D002201 ORTHO05D007560 5.0e-43 178.7 211 49.3
QL01p001010 Quercus lobata HOM05D002201 ORTHO05D007560 1.9e-42 176.8 217 47.9
Atru.chr11.1374 Acer truncatum HOM05D002201 ORTHO05D007560 2.5e-42 176.4 212 49.5
PSO063G3066 Papaver somniferum HOM05D002201 ORTHO05D007560 3.3e-42 176.0 212 48.1
CANSAT64G2925 Cannabis sativa HOM05D002201 ORTHO05D007560 4.7e-41 172.2 211 46.9
Aqoxy3G03893 Aquilegia oxysepala HOM05D002201 ORTHO05D007560 1.8e-40 170.2 212 48.1
Manes.14G096500 Manihot esculenta HOM05D002201 ORTHO05D007560 3.1e-40 169.5 212 48.1
PGR119G1960 Punica granatum HOM05D002201 ORTHO05D007560 4.0e-40 169.1 210 45.7
MBI16_g33830_MAGBIO Magnolia biondii HOM05D002201 ORTHO05D007560 3.4e-39 166.0 191 52.9
arahy.Tifrunner.gnm1.ann1.D2MQ0U Arachis hypogaea HOM05D002201 ORTHO05D007560 1.3e-38 164.1 212 46.2
Dinv05805 Davidia involucrata HOM05D002201 ORTHO05D007560 1.3e-38 164.1 212 46.7
Gohir.D12G174400 Gossypium hirsutum HOM05D002201 ORTHO05D007560 1.3e-38 164.1 210 45.2
CiPaw.15G002600 Carya illinoinensis HOM05D002201 ORTHO05D007560 1.7e-38 163.7 212 44.3
Lj2g0021982 Lotus japonicus HOM05D002201 ORTHO05D007560 2.2e-38 163.3 212 47.2
MD16G1049600 Malus domestica HOM05D002201 ORTHO05D007560 2.9e-38 162.9 213 44.6
Cpa.g.c29023.2 Carica papaya HOM05D002201 ORTHO05D007560 3.7e-38 162.5 203 45.8
Prupe.1G304100 Prunus persica HOM05D002201 ORTHO05D007560 3.7e-38 162.5 213 44.6
GSVIVG01011967001 Vitis vinifera HOM05D002201 ORTHO05D007560 3.7e-38 162.5 212 46.7
arahy.Tifrunner.gnm1.ann1.60XZVP Arachis hypogaea HOM05D002201 ORTHO05D007560 4.9e-38 162.2 212 45.3
Thhalv10003928m.g Eutrema salsugineum HOM05D002201 ORTHO05D007560 4.9e-38 162.2 212 45.3
FAN17G2361 Fragaria x ananassa HOM05D002201 ORTHO05D007560 4.9e-38 162.2 215 44.2
Gorai.008G187100 Gossypium raimondii HOM05D002201 ORTHO05D007560 4.9e-38 162.2 210 44.8
Manes.06G073300 Manihot esculenta HOM05D002201 ORTHO05D007560 8.3e-38 161.4 212 44.8
FvH4_4g28210 Fragaria vesca HOM05D002201 ORTHO05D007560 1.1e-37 161.0 212 44.8
FAN12G2404 Fragaria x ananassa HOM05D002201 ORTHO05D007560 1.4e-37 160.6 212 44.8
FAN07G1361 Fragaria x ananassa HOM05D002201 ORTHO05D007560 1.9e-37 160.2 215 44.2
Thecc.02G362600 Theobroma cacao HOM05D002201 ORTHO05D007560 1.9e-37 160.2 210 45.2
AT3G25680 Arabidopsis thaliana HOM05D002201 ORTHO05D007560 2.4e-37 159.8 212 43.9
Hma1.2p1_0862F.1_g229850 Hydrangea macrophylla HOM05D002201 ORTHO05D007560 2.4e-37 159.8 212 44.8
TWI75G0366 Tripterygium wilfordii HOM05D002201 ORTHO05D007560 2.4e-37 159.8 213 44.6
BcaB07g30634 Brassica carinata HOM05D002201 ORTHO05D007560 5.4e-37 158.7 212 44.3
Cc11_g10720 Coffea canephora HOM05D002201 ORTHO05D007560 5.4e-37 158.7 213 44.1
Sc04g0006800 Simmondsia chinensis HOM05D002201 ORTHO05D007560 5.4e-37 158.7 212 45.3
COL.COLO4_07858 Corchorus olitorius HOM05D000566 ORTHO05D000686 7.0e-37 158.3 204 45.6
RcHm_v2.0_Chr4g0435981 Rosa chinensis HOM05D002201 ORTHO05D007560 9.2e-37 157.9 210 44.8
SalBow8G3742 Salvia bowleyana HOM05D002201 ORTHO05D007560 9.2e-37 157.9 213 46.0
Gohir.A12G172000 Gossypium hirsutum HOM05D002201 ORTHO05D007560 1.6e-36 157.1 210 43.8
MSTRG.13500 Avicennia marina HOM05D002201 ORTHO05D007560 2.0e-36 156.8 213 45.1
Ciclev10031108m.g Citrus clementina HOM05D002201 ORTHO05D007560 2.0e-36 156.8 210 46.7
CAN.G184.77 Capsicum annuum HOM05D002201 ORTHO05D007560 2.7e-36 156.4 210 44.8
Sp2g14940 Schrenkiella parvula HOM05D002201 ORTHO05D007560 2.7e-36 156.4 212 43.4
ATR0053G012 Amborella trichopoda HOM05D002201 ORTHO05D007560 4.6e-36 155.6 220 44.5
BcaC04g21422 Brassica carinata HOM05D002201 ORTHO05D007560 7.8e-36 154.8 212 42.9
C09p31960 Brassica napus HOM05D002201 ORTHO05D007560 7.8e-36 154.8 212 42.9
BolC9t56050H Brassica oleracea HOM05D002201 ORTHO05D007560 7.8e-36 154.8 212 42.9
AL5G14220 Arabidopsis lyrata HOM05D002201 ORTHO05D007560 1.0e-35 154.5 212 42.9
Ca_05686_v3 Cicer arietinum L. HOM05D002201 ORTHO05D007560 1.0e-35 154.5 212 43.4
Glyma.02G101200 Glycine max HOM05D002201 ORTHO05D007560 1.0e-35 154.5 212 44.3
A09p24930 Brassica napus HOM05D002201 ORTHO05D007560 1.3e-35 154.1 212 42.5
BraA09t38081Z Brassica rapa HOM05D002201 ORTHO05D007560 1.3e-35 154.1 212 42.5
Potri.010G131000 Populus trichocarpa HOM05D002201 ORTHO05D007560 1.3e-35 154.1 212 42.9
TPR.G2697 Trifolium pratense HOM05D002201 ORTHO05D007560 1.3e-35 154.1 212 44.8
Zm00001eb281400 Zea mays HOM05D002201 ORTHO05D007560 1.3e-35 154.1 216 41.7
Glyma.01G089500 Glycine max HOM05D002201 ORTHO05D007560 1.7e-35 153.7 212 43.9
Phvul.003G026000 Phaseolus vulgaris HOM05D002201 ORTHO05D007560 1.7e-35 153.7 212 42.9
MD13G1047900 Malus domestica HOM05D002201 ORTHO05D007560 2.3e-35 153.3 213 42.7
Haze_17425 Corylus avellana HOM05D002201 ORTHO05D007560 3.9e-35 152.5 238 40.3
Medtr5g053260 Medicago truncatula HOM05D002201 ORTHO05D007560 6.6e-35 151.8 212 44.3
Actinidia13681 Actinidia chinensis HOM05D002201 ORTHO05D007560 1.1e-34 151.0 212 44.8
CDE10G0618 Ceratophyllum demersum HOM05D002201 ORTHO05D007560 1.1e-34 151.0 215 44.2
Lalb_Chr04g0254971 Lupinus albus HOM05D002201 ORTHO05D007560 1.1e-34 151.0 215 42.8
Lalb_Chr17g0341861 Lupinus albus HOM05D002201 ORTHO05D007560 1.1e-34 151.0 212 43.9
VMungo1215G1906 Vigna mungo HOM05D002201 ORTHO05D007560 1.1e-34 151.0 212 43.4
Carub.0005s0350 Capsella rubella HOM05D002201 ORTHO05D007560 1.5e-34 150.6 212 42.5
HanXRQChr12g0365331 Helianthus annuus HOM05D002201 ORTHO05D007560 1.5e-34 150.6 218 41.7
Oeu024102.2 Olea europaea HOM05D002201 ORTHO05D007560 1.5e-34 150.6 213 44.1
Sabra10G0099800 Salix brachista HOM05D002201 ORTHO05D007560 1.5e-34 150.6 212 43.4
Eucgr.G02358 Eucalyptus grandis HOM05D002201 ORTHO05D007560 1.9e-34 150.2 212 43.4
Lj3C1021T1 Lonicera japonica HOM05D002201 ORTHO05D007560 2.5e-34 149.8 203 44.3
SGA_v2.0_scaffold14G06814 Striga asiatica HOM05D002201 ORTHO05D007560 9.5e-34 147.9 213 41.8
Nn4g23699 Nelumbo nucifera HOM05D002201 ORTHO05D007560 1.2e-33 147.5 210 44.3
Psat2g090640 Pisum sativum HOM05D002201 ORTHO05D007560 1.6e-33 147.1 212 42.9
PGSC0003DMG400000804 Solanum tuberosum HOM05D002201 ORTHO05D007560 1.6e-33 147.1 210 42.9
Solyc05g009940.4 Solanum lycopersicum HOM05D002201 ORTHO05D007560 2.1e-33 146.7 210 43.3
CSS0023752 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D000686 2.8e-33 146.4 209 43.5
AUR62002931 Chenopodium quinoa HOM05D002201 ORTHO05D007560 4.7e-33 145.6 212 41.5
AUR62007741 Chenopodium quinoa HOM05D002201 ORTHO05D007560 4.7e-33 145.6 212 41.5
Lsat_1_v5_gn_8_37461 Lactuca sativa HOM05D002201 ORTHO05D007560 4.7e-33 145.6 215 42.3
THA.LOC104825717 Tarenaya hassleriana HOM05D002201 ORTHO05D007560 4.7e-33 145.6 212 42.0
ECA233G2653 Erigeron canadensis HOM05D002201 ORTHO05D007560 8.0e-33 144.8 210 41.9
Sopen05g005750 Solanum pennellii HOM05D002201 ORTHO05D007560 2.3e-32 143.3 210 42.4
Peaxi162Scf00367g00735 Petunia axillaris HOM05D002201 ORTHO05D007560 8.9e-32 141.4 203 45.3
Rhsim12G0080800 Rhododendron simsii HOM05D002201 ORTHO05D007560 8.9e-32 141.4 212 42.9
Cfa018644 Carpinus fangiana HOM05D002201 ORTHO05D007560 2.0e-31 140.2 234 38.9
Migut.E00290 Erythranthe guttata HOM05D002201 ORTHO05D007560 2.6e-31 139.8 213 41.3
Duzib248G1574 Durio zibethinus HOM05D002201 ORTHO05D007560 4.9e-30 135.6 184 44.6
vmacro01361 Vaccinium macrocarpon HOM05D002201 ORTHO05D007560 4.9e-30 135.6 212 42.0
EL10Ac6g14517 Beta vulgaris HOM05D002201 ORTHO05D007560 1.9e-29 133.7 212 39.2
ClCG05G023090 Citrullus lanatus HOM05D002201 ORTHO05D007560 5.4e-29 132.1 212 37.7
Actinidia38400 Actinidia chinensis HOM05D002201 ORTHO05D007560 4.6e-28 129.0 186 44.1
Sed0021770 Sechium edule HOM05D000566 ORTHO05D000686 2.5e-26 123.2 218 36.7
MELO3C012208.2 Cucumis melo HOM05D002201 ORTHO05D007560 4.9e-22 109.0 210 33.3
CsaV3_5G033900 Cucumis sativus L. HOM05D002201 ORTHO05D007560 2.4e-21 106.7 210 32.4
Aa31LG2G6630 Aethionema arabicum HOM05D002201 ORTHO05D007560 4.1e-21 105.9 212 34.9
Hund25106 Selenicereus undatus HOM05D002201 ORTHO05D007560 9.2e-21 104.8 157 42.7
TWI79G0162 Tripterygium wilfordii HOM05D002201 ORTHO05D007560 1.1e-18 97.8 125 46.4
SEGI_16530 Sequoiadendron giganteum HOM05D002201 ORTHO05D007560 1.9e-18 97.1 210 28.1
SEGI_37768 Sequoiadendron giganteum HOM05D002201 ORTHO05D007560 1.9e-18 97.1 210 28.1
Aa31LG1G6710 Aethionema arabicum HOM05D002201 ORTHO05D007560 1.3e-11 74.3 123 36.6
Nitab4.5_0005803g0050 Nicotiana tabacum HOM05D002201 ORTHO05D007560 7.3e-10 68.6 89 46.1
Nitab4.5_0004705g0030 Nicotiana tabacum HOM05D002201 ORTHO05D007560 9.6e-10 68.2 87 47.1
Pp3c9_18540 Physcomitrium patens HOM05D002201 ORTHO05D005125 1.6e-09 67.4 210 27.1
Solyc06g036040.1 Solanum lycopersicum HOM05D002201 ORTHO05D005125 1.6e-09 67.4 216 30.6
MBI16_g23771_MAGBIO Magnolia biondii HOM05D002201 ORTHO05D007560 2.1e-09 67.0 65 61.5
DCAR_009374 Daucus carota HOM05D002201 ORTHO05D005125 3.1e-08 63.2 229 24.5
Actinidia34127 Actinidia chinensis HOM05D002201 ORTHO05D005125 4.0e-08 62.8 229 25.8
ATR0680G150 Amborella trichopoda HOM05D002201 ORTHO05D005125 4.0e-08 62.8 221 29.0
Hund11737 Selenicereus undatus HOM05D002201 ORTHO05D005125 4.0e-08 62.8 211 28.4
SEGI_06512 Sequoiadendron giganteum HOM05D002201 ORTHO05D005125 1.2e-07 61.2 214 28.0
Lalb_Chr03g0034681 Lupinus albus HOM05D002201 ORTHO05D005125 5.8e-07 58.9 226 26.1
CAN.G1175.4 Capsicum annuum HOM05D002201 ORTHO05D005125 9.9e-07 58.2 226 25.2
Peaxi162Scf00444g00531 Petunia axillaris HOM05D002201 ORTHO05D005125 1.7e-06 57.4 226 25.7
Rhsim03G0187400 Rhododendron simsii HOM05D002201 ORTHO05D005125 2.2e-06 57.0 229 24.5


User provided reference genes

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