Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010064 Vanilla planifolia HOM05D000413 ORTHO05D026976 1.5e-86 322.8 160 100.0
HPP92_010054 Vanilla planifolia HOM05D000413 ORTHO05D000292 1.2e-27 127.1 62 98.4
TAR383G0499 Trochodendron aralioides HOM05D000413 ORTHO05D000292 2.4e-15 86.3 59 64.4
TAR625G1259 Trochodendron aralioides HOM05D000413 ORTHO05D000292 9.0e-15 84.3 58 63.8
Lj7A635T39 Lonicera japonica HOM05D000413 ORTHO05D000292 2.6e-14 82.8 61 63.9
DCAR_017845 Daucus carota HOM05D000413 ORTHO05D000292 1.0e-13 80.9 59 61.0
TWI32G1079 Tripterygium wilfordii HOM05D000413 ORTHO05D000292 1.7e-13 80.1 58 65.5
Nn8g39356 Nelumbo nucifera HOM05D000413 ORTHO05D000292 2.9e-13 79.3 58 63.8
MSTRG.6056 Avicennia marina HOM05D000413 ORTHO05D026976 4.9e-13 78.6 64 56.2
TWI34G1286 Tripterygium wilfordii HOM05D000413 ORTHO05D000292 4.9e-13 78.6 58 63.8
Cpa.g.sc334.1 Carica papaya HOM05D000413 ORTHO05D000292 8.4e-13 77.8 59 62.7
Ciclev10007412m.g Citrus clementina HOM05D000413 ORTHO05D000292 8.4e-13 77.8 60 65.0
TAR365G0554 Trochodendron aralioides HOM05D000413 ORTHO05D000292 8.4e-13 77.8 57 61.4
Manes.14G128600 Manihot esculenta HOM05D000413 ORTHO05D000292 1.1e-12 77.4 58 65.5
DCAR_014857 Daucus carota HOM05D000413 ORTHO05D000292 1.4e-12 77.0 61 59.0
Medtr4g113530 Medicago truncatula HOM05D000413 ORTHO05D000292 1.4e-12 77.0 49 67.3
Potri.018G071400 Populus trichocarpa HOM05D000413 ORTHO05D000292 1.4e-12 77.0 58 63.8
GSVIVG01015479001 Vitis vinifera HOM05D000413 ORTHO05D000292 1.4e-12 77.0 51 68.6
Manes.06G050400 Manihot esculenta HOM05D000413 ORTHO05D000292 1.9e-12 76.6 58 65.5
ClCG06G010760 Citrullus lanatus HOM05D000413 ORTHO05D000292 2.5e-12 76.3 64 62.5
Hma1.2p1_0018F.1_g012860 Hydrangea macrophylla HOM05D000413 ORTHO05D000292 3.2e-12 75.9 59 61.0
CiPaw.03G239300 Carya illinoinensis HOM05D000413 ORTHO05D000292 4.2e-12 75.5 58 62.1
MELO3C026629.2 Cucumis melo HOM05D000413 ORTHO05D000292 4.2e-12 75.5 64 62.5
Gohir.D08G260500 Gossypium hirsutum HOM05D000413 ORTHO05D000292 4.2e-12 75.5 58 62.1
Gorai.004G278500 Gossypium raimondii HOM05D000413 ORTHO05D000292 4.2e-12 75.5 58 62.1
Psat0s3462g0080 Pisum sativum HOM05D000413 ORTHO05D000292 4.2e-12 75.5 49 65.3
Actinidia40442 Actinidia chinensis HOM05D000413 ORTHO05D000292 5.5e-12 75.1 62 56.5
Glyma.05G010600 Glycine max HOM05D000413 ORTHO05D000292 5.5e-12 75.1 50 62.0
Lsat_1_v5_gn_8_58080 Lactuca sativa HOM05D000413 ORTHO05D000292 5.5e-12 75.1 57 63.2
QL02p087193 Quercus lobata HOM05D000413 ORTHO05D000292 5.5e-12 75.1 51 64.7
Sed0001092 Sechium edule HOM05D000413 ORTHO05D000292 5.5e-12 75.1 64 62.5
CsaV3_1G029650 Cucumis sativus L. HOM05D000413 ORTHO05D000292 7.1e-12 74.7 58 63.8
Eucgr.C01105 Eucalyptus grandis HOM05D000413 ORTHO05D000292 7.1e-12 74.7 60 56.7
Lj4g0011866 Lotus japonicus HOM05D000413 ORTHO05D000292 7.1e-12 74.7 49 63.3
Phvul.003G160800 Phaseolus vulgaris HOM05D000413 ORTHO05D000292 7.1e-12 74.7 49 65.3
Gohir.A06G058400 Gossypium hirsutum HOM05D000413 ORTHO05D000292 9.3e-12 74.3 58 63.8
Gohir.A08G239900 Gossypium hirsutum HOM05D000413 ORTHO05D000292 9.3e-12 74.3 58 60.3
HanXRQChr10g0316741 Helianthus annuus HOM05D000413 ORTHO05D000292 9.3e-12 74.3 67 56.7
Peaxi162Scf00170g00321 Petunia axillaris HOM05D000413 ORTHO05D000292 9.3e-12 74.3 61 59.0
HPP92_020172 Vanilla planifolia HOM05D000413 ORTHO05D000292 9.3e-12 74.3 58 65.5
Glyma.17G118300 Glycine max HOM05D000413 ORTHO05D000292 1.2e-11 73.9 49 63.3
Gorai.010G066400 Gossypium raimondii HOM05D000413 ORTHO05D000292 1.2e-11 73.9 58 63.8
HPP92_020164 Vanilla planifolia HOM05D000335 ORTHO05D000459 1.2e-11 73.9 57 63.2
Haze_25635 Corylus avellana HOM05D000413 ORTHO05D000292 1.6e-11 73.6 58 62.1
Sed0008366 Sechium edule HOM05D000413 ORTHO05D000292 1.6e-11 73.6 62 61.3
Thecc.09G120100 Theobroma cacao HOM05D000413 ORTHO05D000292 1.6e-11 73.6 58 60.3
Eucgr.C01286 Eucalyptus grandis HOM05D000413 ORTHO05D000292 2.1e-11 73.2 60 56.7
Atru.chr7.1241 Acer truncatum HOM05D000413 ORTHO05D000292 2.7e-11 72.8 52 65.4
HanXRQChr07g0197351 Helianthus annuus HOM05D000413 ORTHO05D000292 2.7e-11 72.8 60 58.3
PGR102G0201 Punica granatum HOM05D000413 ORTHO05D000292 2.7e-11 72.8 58 58.6
Solyc12g006850.2 Solanum lycopersicum HOM05D000413 ORTHO05D000292 2.7e-11 72.8 65 56.9
Zm00001eb158420 Zea mays HOM05D000413 ORTHO05D000292 2.7e-11 72.8 41 78.0
PSO170G1054 Papaver somniferum HOM05D000413 ORTHO05D000292 3.5e-11 72.4 58 60.3
PSO455G0125 Papaver somniferum HOM05D000413 ORTHO05D000292 3.5e-11 72.4 58 60.3
TPR.G9084 Trifolium pratense HOM05D000413 ORTHO05D000292 3.5e-11 72.4 49 63.3
MD15G1178200 Malus domestica HOM05D000413 ORTHO05D000292 4.6e-11 72.0 64 56.2
VMungo1215G0278 Vigna mungo HOM05D000413 ORTHO05D000292 4.6e-11 72.0 48 62.5
CSS0027700 Camellia sinensis var. sinensis HOM05D000413 ORTHO05D000292 6.1e-11 71.6 58 60.3
Duzib168G1620 Durio zibethinus HOM05D000413 ORTHO05D000292 6.1e-11 71.6 51 62.7
CiPaw.04G169000 Carya illinoinensis HOM05D000413 ORTHO05D000292 7.9e-11 71.2 58 58.6
Cc06_g09010 Coffea canephora HOM05D000413 ORTHO05D000292 7.9e-11 71.2 54 61.1
Gohir.D06G056700 Gossypium hirsutum HOM05D000413 ORTHO05D000292 7.9e-11 71.2 58 62.1
Oeu042644.1 Olea europaea HOM05D000413 ORTHO05D000292 7.9e-11 71.2 58 56.9
Rhsim01G0087600 Rhododendron simsii HOM05D000413 ORTHO05D000292 7.9e-11 71.2 66 53.0
Zm00001eb359320 Zea mays HOM05D000413 ORTHO05D000292 7.9e-11 71.2 41 78.0
MSTRG.10567 Avicennia marina HOM05D000413 ORTHO05D000292 1.0e-10 70.9 45 66.7
Rhsim01G0087100 Rhododendron simsii HOM05D000413 ORTHO05D000292 1.0e-10 70.9 66 53.0
Migut.J00604 Erythranthe guttata HOM05D000413 ORTHO05D000292 1.3e-10 70.5 54 55.6
Lsat_1_v5_gn_5_97621 Lactuca sativa HOM05D000413 ORTHO05D000292 1.3e-10 70.5 67 53.7
SalBow1G2224 Salvia bowleyana HOM05D000413 ORTHO05D000292 1.3e-10 70.5 46 63.0
PGSC0003DMG400001066 Solanum tuberosum HOM05D000413 ORTHO05D000292 1.3e-10 70.5 65 55.4
CSS0025140 Camellia sinensis var. sinensis HOM05D000413 ORTHO05D000292 1.8e-10 70.1 52 61.5
CSS0032430 Camellia sinensis var. sinensis HOM05D000413 ORTHO05D000292 1.8e-10 70.1 52 61.5
CSS0048724 Camellia sinensis var. sinensis HOM05D000413 ORTHO05D000292 1.8e-10 70.1 52 61.5
CAN.G713.10 Capsicum annuum HOM05D000413 ORTHO05D000292 1.8e-10 70.1 65 55.4
Gohir.A13G198600 Gossypium hirsutum HOM05D000413 ORTHO05D000292 1.8e-10 70.1 51 58.8
Gohir.D13G204000 Gossypium hirsutum HOM05D000413 ORTHO05D000292 1.8e-10 70.1 51 58.8
Gorai.013G232800 Gossypium raimondii HOM05D000413 ORTHO05D000292 1.8e-10 70.1 51 58.8
Prupe.7G237400 Prunus persica HOM05D000413 ORTHO05D000292 1.8e-10 70.1 64 57.8
COL.COLO4_15586 Corchorus olitorius HOM05D000413 ORTHO05D000292 2.3e-10 69.7 58 56.9
ECA234G3186 Erigeron canadensis HOM05D000413 ORTHO05D000292 2.3e-10 69.7 54 57.4
RcHm_v2.0_Chr2g0089421 Rosa chinensis HOM05D000413 ORTHO05D000292 2.3e-10 69.7 55 60.0
Duzib187G1403 Durio zibethinus HOM05D000413 ORTHO05D000292 3.0e-10 69.3 55 56.4
Nitab4.5_0003235g0040 Nicotiana tabacum HOM05D000413 ORTHO05D000292 3.9e-10 68.9 52 57.7
MD02G1037900 Malus domestica HOM05D000413 ORTHO05D000292 5.1e-10 68.6 57 59.6
Os01g0648000 Oryza sativa ssp. japonica HOM05D000413 ORTHO05D000292 5.1e-10 68.6 41 73.2
Gohir.D07G002800 Gossypium hirsutum HOM05D000413 ORTHO05D000292 6.7e-10 68.2 56 53.6
Gorai.001G002700 Gossypium raimondii HOM05D000413 ORTHO05D000292 6.7e-10 68.2 56 53.6
FAN19G0116 Fragaria x ananassa HOM05D000413 ORTHO05D000292 8.7e-10 67.8 55 58.2
FAN23G0812 Fragaria x ananassa HOM05D000413 ORTHO05D000292 8.7e-10 67.8 55 58.2
FAN26G2422 Fragaria x ananassa HOM05D000413 ORTHO05D000292 8.7e-10 67.8 55 58.2
FAN28G1676 Fragaria x ananassa HOM05D000413 ORTHO05D000292 8.7e-10 67.8 55 58.2
Lj4C463G1 Lonicera japonica HOM05D000413 ORTHO05D000292 8.7e-10 67.8 69 52.2
Nn2g11928 Nelumbo nucifera HOM05D000413 ORTHO05D000292 8.7e-10 67.8 48 62.5
Sopen12g002820 Solanum pennellii HOM05D000413 ORTHO05D000292 8.7e-10 67.8 51 56.9
CDE07G1788 Ceratophyllum demersum HOM05D000413 ORTHO05D026976 1.1e-09 67.4 57 50.9
SHI03356 Sapria himalayana HOM05D000413 ORTHO05D000292 1.5e-09 67.0 59 55.9
AL4G19630 Arabidopsis lyrata HOM05D000413 ORTHO05D000292 1.9e-09 66.6 52 55.8
SalBow6G3449 Salvia bowleyana HOM05D000413 ORTHO05D000292 2.5e-09 66.2 44 63.6
ATR0815G020 Amborella trichopoda HOM05D000413 ORTHO05D000292 3.3e-09 65.9 52 59.6
CARHR118540 Cardamine hirsuta HOM05D000413 ORTHO05D000292 3.3e-09 65.9 52 57.7
Migut.L01488 Erythranthe guttata HOM05D000413 ORTHO05D000292 3.3e-09 65.9 62 48.4
MBI01_g34141_MAGBIO Magnolia biondii HOM05D000413 ORTHO05D000292 3.3e-09 65.9 41 70.7
PGR142G0791 Punica granatum HOM05D000413 ORTHO05D000292 3.3e-09 65.9 64 53.1
AT2G26650 Arabidopsis thaliana HOM05D000413 ORTHO05D000292 4.3e-09 65.5 52 53.8
THA.LOC104809011 Tarenaya hassleriana HOM05D000413 ORTHO05D000292 4.3e-09 65.5 53 52.8
arahy.Tifrunner.gnm1.ann1.7WV7S8 Arachis hypogaea HOM05D000413 ORTHO05D000292 5.7e-09 65.1 40 72.5
ECA233G2705 Erigeron canadensis HOM05D000413 ORTHO05D000292 5.7e-09 65.1 41 68.3
Gohir.A07G002500 Gossypium hirsutum HOM05D000413 ORTHO05D000292 7.4e-09 64.7 45 60.0
Peaxi162Scf00780g00039 Petunia axillaris HOM05D000413 ORTHO05D000292 7.4e-09 64.7 47 59.6
Thhalv10001904m.g Eutrema salsugineum HOM05D000413 ORTHO05D000292 2.2e-08 63.2 45 57.8
QL04p014776 Quercus lobata HOM05D000413 ORTHO05D000292 2.2e-08 63.2 44 59.1
Aa31LG5G9210 Aethionema arabicum HOM05D000413 ORTHO05D000292 2.8e-08 62.8 44 56.8
arahy.Tifrunner.gnm1.ann1.T65EYX Arachis hypogaea HOM05D000413 ORTHO05D000292 2.8e-08 62.8 40 70.0
Carub.0004s0693 Capsella rubella HOM05D000413 ORTHO05D000292 4.8e-08 62.0 54 53.7
BcaB06g28037 Brassica carinata HOM05D000413 ORTHO05D000292 6.3e-08 61.6 45 53.3
Lalb_Chr13g0302111 Lupinus albus HOM05D000413 ORTHO05D000292 6.3e-08 61.6 45 62.2
Nitab4.5_0000066g0100 Nicotiana tabacum HOM05D000413 ORTHO05D000292 1.1e-07 60.8 63 50.8
Aqoxy7G02026 Aquilegia oxysepala HOM05D000413 ORTHO05D000292 1.4e-07 60.5 60 46.7
A04p19530 Brassica napus HOM05D000413 ORTHO05D000292 1.4e-07 60.5 45 51.1
BraA04t17547Z Brassica rapa HOM05D000413 ORTHO05D000292 1.4e-07 60.5 45 51.1
BcaC02g08368 Brassica carinata HOM05D000413 ORTHO05D000292 1.8e-07 60.1 45 51.1
C04p55130 Brassica napus HOM05D000413 ORTHO05D000292 1.8e-07 60.1 45 51.1
BolC4t27052H Brassica oleracea HOM05D000413 ORTHO05D000292 1.8e-07 60.1 45 51.1
Sp4g09520 Schrenkiella parvula HOM05D000413 ORTHO05D000292 2.4e-07 59.7 45 53.3
Hund03016 Selenicereus undatus HOM05D000413 ORTHO05D000292 3.1e-07 59.3 58 50.0
SEGI_06361 Sequoiadendron giganteum HOM05D000413 ORTHO05D026976 4.1e-07 58.9 42 59.5
GSVIVG01035801001 Vitis vinifera HOM05D000413 ORTHO05D000292 5.3e-07 58.5 45 60.0
CANSAT56G0468 Cannabis sativa HOM05D000413 ORTHO05D000292 6.9e-07 58.2 51 56.9
HanXRQChr06g0179901 Helianthus annuus HOM05D000413 ORTHO05D000292 6.9e-07 58.2 65 46.2
Actinidia26414 Actinidia chinensis HOM05D000413 ORTHO05D000292 9.0e-07 57.8 67 44.8
MBI04_g29847_MAGBIO Magnolia biondii HOM05D000413 ORTHO05D000292 1.5e-06 57.0 65 43.1
Nitab4.5_0000010g0030 Nicotiana tabacum HOM05D000413 ORTHO05D000292 1.5e-06 57.0 54 51.9
PSO170G5308 Papaver somniferum HOM05D000413 ORTHO05D000292 1.5e-06 57.0 49 55.1
BcaB01g03031 Brassica carinata HOM05D000413 ORTHO05D000292 2.6e-06 56.2 45 51.1
Cfa013186 Carpinus fangiana HOM05D000413 ORTHO05D000292 2.6e-06 56.2 40 67.5
Eucgr.C04163 Eucalyptus grandis HOM05D000413 ORTHO05D000292 2.6e-06 56.2 63 49.2
vmacro05198 Vaccinium macrocarpon HOM05D000413 ORTHO05D000292 2.6e-06 56.2 46 58.7
Haze_21578 Corylus avellana HOM05D000413 ORTHO05D000292 3.4e-06 55.8 40 67.5
Thecc.09G148500 Theobroma cacao HOM05D000413 ORTHO05D000292 3.4e-06 55.8 74 48.6
Actinidia15691 Actinidia chinensis HOM05D000413 ORTHO05D000292 4.5e-06 55.5 47 55.3
FAN15G0471 Fragaria x ananassa HOM05D000413 ORTHO05D000292 4.5e-06 55.5 54 50.0
Hma1.2p1_0000F.1_g000850 Hydrangea macrophylla HOM05D000413 ORTHO05D000292 4.5e-06 55.5 65 44.6
Oeu030200.1 Olea europaea HOM05D000413 ORTHO05D000292 7.7e-06 54.7 47 53.2


User provided reference genes

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