Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 4.1e-226 787.7 401 100.0
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 1.5e-138 496.9 398 63.1
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 1.6e-137 493.4 398 63.6
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 2.9e-134 482.6 390 63.1
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 3.7e-134 482.3 399 61.9
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 3.7e-134 482.3 404 62.6
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 4.9e-134 481.9 398 61.8
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 3.2e-133 479.2 390 63.8
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 9.2e-133 477.6 390 63.1
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 1.7e-131 473.4 390 63.1
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 2.3e-131 473.0 400 62.2
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 2.3e-131 473.0 392 62.2
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 6.6e-131 471.5 395 62.8
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 8.6e-131 471.1 397 61.2
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 1.9e-130 469.9 390 62.6
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 3.3e-130 469.2 414 59.9
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 2.8e-129 466.1 390 61.8
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 2.8e-129 466.1 392 62.5
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 8.0e-129 464.5 403 60.8
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 1.0e-128 464.2 403 61.5
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 1.4e-128 463.8 403 61.5
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 2.3e-128 463.0 398 60.6
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 2.3e-128 463.0 403 61.0
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 2.3e-128 463.0 390 62.1
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 4.0e-128 462.2 391 61.6
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 5.2e-128 461.8 390 62.1
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 8.9e-128 461.1 403 61.5
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 1.2e-127 460.7 390 62.3
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 1.2e-127 460.7 392 62.5
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 2.0e-127 459.9 390 61.0
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 2.6e-127 459.5 391 61.4
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 3.4e-127 459.1 390 60.0
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 4.4e-127 458.8 390 61.5
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 5.8e-127 458.4 403 61.3
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 1.3e-126 457.2 390 62.3
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 1.7e-126 456.8 392 61.5
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 2.2e-126 456.4 390 61.0
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 3.7e-126 455.7 391 60.9
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 3.7e-126 455.7 387 59.2
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 8.3e-126 454.5 392 62.5
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 1.1e-125 454.1 403 61.3
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 1.9e-125 453.4 390 60.0
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 1.6e-124 450.3 403 59.8
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 2.0e-124 449.9 413 58.6
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 2.7e-124 449.5 403 58.3
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 2.7e-124 449.5 392 61.2
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 6.0e-124 448.4 398 59.8
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 1.0e-123 447.6 442 55.2
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 1.3e-123 447.2 358 64.5
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 3.9e-123 445.7 387 58.7
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 1.9e-122 443.4 393 62.3
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 5.6e-122 441.8 391 60.6
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 7.3e-122 441.4 391 60.9
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 9.5e-122 441.0 390 59.2
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 1.6e-121 440.3 403 58.3
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 6.2e-121 438.3 396 60.1
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 1.1e-120 437.6 433 54.5
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 1.1e-120 437.6 414 57.0
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 1.4e-120 437.2 392 58.7
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 8.9e-120 434.5 402 59.2
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 1.2e-119 434.1 393 60.3
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 2.6e-119 433.0 396 59.1
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 2.6e-119 433.0 405 57.5
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 3.4e-119 432.6 402 57.7
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 7.5e-119 431.4 403 58.1
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 1.7e-118 430.3 388 59.3
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 8.3e-118 427.9 395 58.7
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 8.3e-118 427.9 395 58.5
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 8.3e-118 427.9 388 58.8
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 1.1e-117 427.6 390 57.9
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 1.9e-117 426.8 389 59.4
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 1.9e-117 426.8 390 57.2
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 2.4e-117 426.4 388 58.5
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 2.1e-116 423.3 387 59.4
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 7.8e-116 421.4 395 58.7
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 1.3e-115 420.6 403 55.6
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 3.0e-115 419.5 407 57.0
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 3.0e-115 419.5 400 57.0
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 1.1e-114 417.5 392 56.1
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 1.9e-114 416.8 395 56.7
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 2.5e-114 416.4 399 57.1
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 2.5e-114 416.4 414 54.6
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 7.3e-114 414.8 408 55.9
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 1.6e-113 413.7 391 56.8
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 2.1e-113 413.3 404 55.9
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 1.1e-112 411.0 396 57.3
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 1.8e-112 410.2 393 57.5
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 3.1e-112 409.5 412 54.4
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 3.1e-112 409.5 404 54.7
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 8.9e-112 407.9 413 54.2
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 8.9e-112 407.9 400 55.5
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 9.9e-111 404.4 387 57.1
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 1.1e-109 401.0 349 59.9
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 1.4e-109 400.6 406 55.9
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 4.1e-109 399.1 413 53.3
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 5.4e-109 398.7 405 55.8
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 2.1e-108 396.7 439 50.3
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 2.1e-108 396.7 405 53.8
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 2.7e-108 396.4 398 55.5
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 2.3e-107 393.3 400 55.8
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 3.9e-107 392.5 406 55.9
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 3.9e-107 392.5 395 53.4
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 3.3e-106 389.4 375 56.5
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 5.6e-106 388.7 406 55.9
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 6.2e-105 385.2 357 58.5
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 3.4e-103 379.4 403 51.9
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 3.1e-96 356.3 335 57.3
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 6.4e-94 348.6 317 57.7
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 8.1e-89 331.6 391 48.6
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 2.0e-87 327.0 327 55.0
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 9.9e-87 324.7 401 47.4
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 3.2e-85 319.7 327 53.8
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 4.9e-78 295.8 409 42.5
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 3.0e-75 286.6 406 39.4
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 3.7e-73 279.6 394 41.1
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 1.8e-67 260.8 243 58.4
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 1.1e-66 258.1 394 40.4
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 2.1e-52 210.7 275 45.5
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 2.0e-50 204.1 129 76.0
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 1.2e-26 125.2 382 31.4
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 1.8e-24 117.9 105 60.0
Lsat_1_v5_gn_2_121941 Lactuca sativa HOM05D005650 ORTHO05D007020 2.9e-22 110.5 78 62.8
Lsat_1_v5_gn_7_69840 Lactuca sativa HOM05D005650 ORTHO05D007020 8.6e-22 109.0 73 65.8
C06p32890 Brassica napus HOM05D005650 ORTHO05D007020 4.3e-21 106.7 104 57.7
MELO3C019077.2 Cucumis melo HOM05D005650 ORTHO05D007020 1.4e-19 101.7 72 66.7
Lsat_1_v5_gn_1_123601 Lactuca sativa HOM05D005650 ORTHO05D007020 6.8e-19 99.4 65 66.2
CiPaw.05G157900 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.2e-18 98.6 69 66.7
CBR_g31091 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-18 98.2 137 40.9
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 1.8e-16 91.3 89 50.6
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 1.1e-11 75.5 236 28.4


User provided reference genes

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