Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 0.0e+00 1285.0 684 100.0
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 1.8e-189 666.8 710 53.8
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 3.5e-185 652.5 708 52.4
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 9.7e-183 644.4 713 52.9
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.5e-180 637.1 749 48.9
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 3.4e-180 636.0 744 50.3
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 7.7e-180 634.8 642 54.5
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.8e-179 632.5 758 49.9
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 8.5e-179 631.3 753 49.7
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 2.7e-177 626.3 694 52.2
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 7.9e-177 624.8 753 48.6
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 1.8e-176 623.6 716 50.0
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 1.8e-176 623.6 728 50.1
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 2.3e-176 623.2 713 51.2
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 5.7e-175 618.6 705 51.5
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.3e-174 617.5 703 50.4
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 1.3e-174 617.5 766 48.6
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 2.2e-174 616.7 720 48.9
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 1.8e-173 613.6 749 49.3
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 2.4e-173 613.2 740 47.3
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 6.9e-173 611.7 751 48.7
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 1.2e-172 610.9 703 49.6
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 1.5e-172 610.5 739 47.4
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 2.0e-172 610.1 781 46.9
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 2.0e-172 610.1 687 51.8
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 2.6e-172 609.8 691 52.0
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 4.5e-172 609.0 749 47.5
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.7e-171 607.1 679 51.0
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 1.7e-171 607.1 740 47.6
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 2.9e-171 606.3 746 48.0
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 2.9e-171 606.3 781 46.9
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.9e-171 606.3 777 47.0
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 3.8e-171 605.9 748 48.3
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 6.5e-171 605.1 712 50.8
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 6.5e-171 605.1 663 51.7
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 8.5e-171 604.7 744 47.7
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.1e-170 604.4 781 46.4
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 1.9e-170 603.6 755 46.6
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 1.9e-170 603.6 743 47.2
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 1.9e-170 603.6 744 47.4
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 4.2e-170 602.4 703 50.5
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 9.4e-170 601.3 689 49.6
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 9.4e-170 601.3 781 46.6
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 1.2e-169 600.9 743 47.9
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 1.0e-168 597.8 741 47.4
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.1e-167 594.3 659 52.8
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 2.6e-167 593.2 689 48.3
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 5.7e-167 592.0 705 47.9
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 9.7e-167 591.3 760 47.0
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 9.7e-167 591.3 745 47.7
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 2.2e-166 590.1 745 48.1
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 2.2e-166 590.1 759 46.9
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 2.2e-166 590.1 761 47.0
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 3.7e-166 589.3 740 46.4
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 4.8e-166 589.0 700 49.7
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 6.3e-166 588.6 710 47.3
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 6.3e-166 588.6 694 48.6
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 1.8e-165 587.0 752 46.4
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 3.1e-165 586.3 744 46.5
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 7.0e-165 585.1 766 45.3
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 1.2e-164 584.3 736 46.9
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 2.0e-164 583.6 717 48.7
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 1.3e-163 580.9 754 46.2
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.9e-163 579.7 827 44.0
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 2.9e-163 579.7 697 50.1
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 8.5e-163 578.2 738 46.9
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 2.5e-162 576.6 750 45.1
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 3.2e-162 576.2 666 48.8
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 7.2e-162 575.1 675 48.4
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 1.0e-160 571.2 671 47.8
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 2.3e-160 570.1 646 49.2
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 8.8e-160 568.2 644 49.5
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 8.8e-160 568.2 644 49.5
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 2.0e-159 567.0 669 47.8
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 2.6e-159 566.6 644 49.1
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 9.7e-159 564.7 727 45.4
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 2.8e-158 563.1 686 46.9
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 4.8e-158 562.4 645 48.4
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 8.2e-158 561.6 663 48.0
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 1.1e-157 561.2 790 43.9
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 1.4e-157 560.8 731 46.6
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 4.5e-156 555.8 748 47.1
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 5.9e-156 555.4 683 46.3
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 6.5e-155 552.0 712 45.6
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 9.4e-154 548.1 670 46.3
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 8.8e-152 541.6 702 44.3
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 2.6e-151 540.0 757 43.6
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 3.1e-149 533.1 645 50.7
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 7.0e-149 531.9 695 46.3
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 1.0e-144 518.1 663 46.3
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 5.9e-140 502.3 680 47.1
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 3.5e-132 476.5 666 41.9
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 2.0e-124 450.7 573 45.2
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 2.5e-122 443.7 408 55.6
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 1.0e-115 421.8 353 58.6
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 3.6e-113 413.3 718 39.3
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 1.9e-109 401.0 541 46.0
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 1.5e-103 381.3 339 57.8
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 1.2e-100 371.7 635 41.3
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 2.4e-96 357.5 572 42.0
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 1.1e-88 332.0 349 52.4
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 5.3e-80 303.1 504 37.7
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 1.3e-73 282.0 698 31.9
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 5.5e-69 266.5 326 50.6
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 5.3e-64 250.0 510 36.3
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.2e-63 248.8 538 32.0
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 2.0e-63 248.1 894 27.7
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 2.2e-62 244.6 171 71.9
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 2.7e-52 211.1 584 28.1
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 2.3e-43 181.4 143 60.1
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 3.4e-34 151.0 188 45.2
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 1.0e-27 129.4 246 41.1
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 1.2e-26 125.9 152 48.7
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 4.4e-26 124.0 71 76.1
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 7.0e-24 116.7 68 76.5
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 1.2e-20 105.9 66 68.2
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.6e-12 79.0 138 42.0
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 3.4e-10 71.2 39 76.9
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 3.4e-10 71.2 39 76.9
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 2.7e-07 61.6 47 55.3


User provided reference genes

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