Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009387 Vanilla planifolia HOM05D006362 ORTHO05D008295 0.0e+00 1112.1 568 100.0
TAR626G1624 Trochodendron aralioides HOM05D006362 ORTHO05D008295 1.3e-241 839.7 562 75.3
GSVIVG01001989001 Vitis vinifera HOM05D006362 ORTHO05D008295 3.0e-238 828.6 564 74.3
PSO832G4364 Papaver somniferum HOM05D006362 ORTHO05D008295 1.1e-235 820.1 565 73.8
Nn1g07069 Nelumbo nucifera HOM05D006362 ORTHO05D008295 3.8e-233 811.6 552 74.5
Thecc.07G046200 Theobroma cacao HOM05D006362 ORTHO05D008295 2.5e-232 808.9 569 72.2
Gohir.A01G076501 Gossypium hirsutum HOM05D006362 ORTHO05D008295 3.2e-232 808.5 566 72.6
Eucgr.F03442 Eucalyptus grandis HOM05D006362 ORTHO05D008295 5.5e-232 807.7 567 72.7
Dinv40729 Davidia involucrata HOM05D006362 ORTHO05D008295 2.1e-231 805.8 564 72.2
MELO3C018085.2 Cucumis melo HOM05D006362 ORTHO05D008295 4.6e-231 804.7 567 71.4
Gorai.002G084800 Gossypium raimondii HOM05D006362 ORTHO05D008295 4.6e-231 804.7 566 72.3
Manes.15G074800 Manihot esculenta HOM05D006362 ORTHO05D008295 6.1e-231 804.3 568 72.0
Sed0025840 Sechium edule HOM05D006362 ORTHO05D008295 7.9e-231 803.9 567 71.3
Duzib268G0905 Durio zibethinus HOM05D006362 ORTHO05D008295 1.0e-230 803.5 568 72.2
CsaV3_1G044730 Cucumis sativus L. HOM05D006362 ORTHO05D008295 2.3e-230 802.4 567 71.6
RcHm_v2.0_Chr4g0399351 Rosa chinensis HOM05D006362 ORTHO05D008295 1.5e-229 799.7 573 71.7
Potri.011G135800 Populus trichocarpa HOM05D006362 ORTHO05D008295 1.9e-229 799.3 571 71.8
QL08p012554 Quercus lobata HOM05D006362 ORTHO05D008295 4.3e-229 798.1 564 71.6
FvH4_4g07170 Fragaria vesca HOM05D006362 ORTHO05D008295 5.7e-229 797.7 566 71.6
FAN12G0341 Fragaria x ananassa HOM05D006362 ORTHO05D008295 9.7e-229 797.0 566 71.6
Aqoxy1G03661 Aquilegia oxysepala HOM05D006362 ORTHO05D008295 2.8e-228 795.4 562 71.0
Atru.chr2.3247 Acer truncatum HOM05D006362 ORTHO05D008295 3.7e-228 795.0 567 71.4
CANSAT11G0353 Cannabis sativa HOM05D006362 ORTHO05D008295 4.8e-228 794.7 568 71.8
Sc14g0006480 Simmondsia chinensis HOM05D006362 ORTHO05D008295 4.8e-228 794.7 573 72.3
MD03G1209000 Malus domestica HOM05D006362 ORTHO05D008295 1.8e-227 792.7 564 71.3
ATR0697G203 Amborella trichopoda HOM05D006362 ORTHO05D008295 5.3e-227 791.2 563 71.2
Cfa020397 Carpinus fangiana HOM05D006362 ORTHO05D008295 5.3e-227 791.2 634 65.0
FAN22G0212 Fragaria x ananassa HOM05D006362 ORTHO05D008295 6.9e-227 790.8 584 69.7
TWI38G1299 Tripterygium wilfordii HOM05D006362 ORTHO05D008295 6.9e-227 790.8 567 71.1
Os04g0626900 Oryza sativa ssp. japonica HOM05D006362 ORTHO05D008295 1.2e-226 790.0 573 70.3
Ciclev10007871m.g Citrus clementina HOM05D006362 ORTHO05D008295 4.5e-226 788.1 567 70.7
Gohir.D01G064000 Gossypium hirsutum HOM05D006362 ORTHO05D008295 4.5e-226 788.1 566 71.2
Hma1.2p1_1344F.1_g277040 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 1.0e-225 786.9 557 72.0
Prupe.4G206200 Prunus persica HOM05D006362 ORTHO05D008295 5.0e-225 784.6 550 72.5
Lalb_Chr03g0030071 Lupinus albus HOM05D006362 ORTHO05D008295 4.2e-224 781.6 563 69.4
THA.LOC104818092 Tarenaya hassleriana HOM05D006362 ORTHO05D008295 4.7e-223 778.1 565 71.3
Lj3g0015245 Lotus japonicus HOM05D006362 ORTHO05D008295 1.0e-222 776.9 567 69.8
Psat7g162880 Pisum sativum HOM05D006362 ORTHO05D008295 1.8e-222 776.2 561 69.3
TPR.G25875 Trifolium pratense HOM05D006362 ORTHO05D008295 2.3e-222 775.8 561 69.2
Glyma.06G271800 Glycine max HOM05D006362 ORTHO05D008295 2.2e-220 769.2 564 69.7
Solyc10g006410.3 Solanum lycopersicum HOM05D006362 ORTHO05D008295 4.8e-220 768.1 572 67.8
arahy.Tifrunner.gnm1.ann1.Z96I2W Arachis hypogaea HOM05D006362 ORTHO05D008295 8.2e-220 767.3 566 68.0
Oeu021406.2 Olea europaea HOM05D006362 ORTHO05D008295 2.4e-219 765.8 566 68.0
Medtr4g081050 Medicago truncatula HOM05D006362 ORTHO05D008295 6.9e-219 764.2 561 68.3
Sopen10g002360 Solanum pennellii HOM05D006362 ORTHO05D008295 2.0e-218 762.7 572 67.3
Nitab4.5_0002342g0020 Nicotiana tabacum HOM05D006362 ORTHO05D008295 3.4e-218 761.9 563 69.6
PGR031G2573 Punica granatum HOM05D006362 ORTHO05D008295 4.5e-218 761.5 549 71.2
DCAR_022536 Daucus carota HOM05D006362 ORTHO05D008295 2.2e-217 759.2 586 66.7
Thhalv10020417m.g Eutrema salsugineum HOM05D006362 ORTHO05D008295 1.9e-216 756.1 568 68.8
Haze_09637 Corylus avellana HOM05D006362 ORTHO05D008295 1.2e-215 753.4 626 63.9
CARHR090140 Cardamine hirsuta HOM05D006362 ORTHO05D008295 4.7e-215 751.5 564 68.8
Carub.0003s1481 Capsella rubella HOM05D006362 ORTHO05D008295 6.1e-215 751.1 569 68.7
AT3G15160 Arabidopsis thaliana HOM05D006362 ORTHO05D008295 1.0e-214 750.4 569 68.5
HanXRQChr13g0407741 Helianthus annuus HOM05D006362 ORTHO05D008295 1.0e-214 750.4 561 68.3
AL3G27550 Arabidopsis lyrata HOM05D006362 ORTHO05D008295 1.4e-214 750.0 569 69.1
BraA03t13067Z Brassica rapa HOM05D006362 ORTHO05D008295 1.4e-214 750.0 565 68.5
Ca_18860_v3 Cicer arietinum L. HOM05D006362 ORTHO05D008295 1.8e-214 749.6 553 68.5
Cc05_g13400 Coffea canephora HOM05D006362 ORTHO05D008295 8.8e-214 747.3 562 68.0
Aa31LG8G2360 Aethionema arabicum HOM05D006362 ORTHO05D008295 1.1e-213 746.9 569 67.8
BolC3t17030H Brassica oleracea HOM05D006362 ORTHO05D008295 1.1e-213 746.9 565 68.5
ECA240G1610 Erigeron canadensis HOM05D006362 ORTHO05D008295 1.5e-213 746.5 563 67.9
Sp3g13370 Schrenkiella parvula HOM05D006362 ORTHO05D008295 1.5e-213 746.5 566 68.6
C03p47540 Brassica napus HOM05D006362 ORTHO05D008295 2.0e-213 746.1 565 68.5
CAN.G1781.12 Capsicum annuum HOM05D006362 ORTHO05D008295 7.4e-213 744.2 562 67.1
A03p39180 Brassica napus HOM05D006362 ORTHO05D008295 9.7e-213 743.8 565 68.1
Ah.06g182950 Amaranthus hybridus HOM05D006362 ORTHO05D008295 1.3e-212 743.4 571 66.4
Phvul.011G136800 Phaseolus vulgaris HOM05D006362 ORTHO05D008295 1.3e-212 743.4 549 68.3
Gorai.009G425700 Gossypium raimondii HOM05D006362 ORTHO05D008295 2.8e-212 742.3 567 67.2
arahy.Tifrunner.gnm1.ann1.GJJ2CM Arachis hypogaea HOM05D006362 ORTHO05D008295 5.3e-211 738.0 562 66.5
CDE05G0917 Ceratophyllum demersum HOM05D006362 ORTHO05D008295 2.0e-210 736.1 551 68.8
AUR62020525 Chenopodium quinoa HOM05D006362 ORTHO05D008295 7.7e-210 734.2 550 68.9
Rhsim06G0213400 Rhododendron simsii HOM05D006362 ORTHO05D008295 3.3e-205 718.8 606 63.9
BcaC01g03890 Brassica carinata HOM05D006362 ORTHO05D008295 9.7e-205 717.2 587 64.4
ClCG05G014560 Citrullus lanatus HOM05D006362 ORTHO05D008295 3.7e-204 715.3 585 64.8
SGA_v2.0_scaffold80G25930 Striga asiatica HOM05D006362 ORTHO05D008295 7.0e-203 711.1 563 64.3
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 9.1e-203 710.7 566 65.7
EL10Ac4g07932 Beta vulgaris HOM05D006362 ORTHO05D008295 1.0e-201 707.2 556 66.2
Gohir.A04G020300 Gossypium hirsutum HOM05D006362 ORTHO05D008295 2.2e-201 706.1 564 65.2
Peaxi162Scf00387g00613 Petunia axillaris HOM05D006362 ORTHO05D008295 1.8e-198 696.4 561 64.2
FAN17G1244 Fragaria x ananassa HOM05D006362 ORTHO05D008295 6.8e-198 694.5 583 64.3
AUR62015672 Chenopodium quinoa HOM05D006362 ORTHO05D008295 1.5e-197 693.3 577 64.3
Lj1C868T5 Lonicera japonica HOM05D006362 ORTHO05D008295 9.8e-197 690.6 535 67.9
Sabra11G0122000 Salix brachista HOM05D006362 ORTHO05D008295 5.9e-194 681.4 599 62.3
Migut.M01793 Erythranthe guttata HOM05D006362 ORTHO05D008295 1.3e-193 680.2 564 62.6
Nitab4.5_0002229g0190 Nicotiana tabacum HOM05D006362 ORTHO05D008295 1.5e-192 676.8 584 62.5
Lsat_1_v5_gn_5_81640 Lactuca sativa HOM05D006362 ORTHO05D008295 2.2e-188 662.9 548 64.4
Hund23291 Selenicereus undatus HOM05D006362 ORTHO05D008295 1.3e-180 637.1 511 65.0
CiPaw.11G185900 Carya illinoinensis HOM05D006362 ORTHO05D008295 5.6e-176 621.7 428 74.3
Mapoly0021s0009 Marchantia polymorpha HOM05D006362 ORTHO05D008295 1.5e-168 597.0 561 56.5
Pp3c24_12510 Physcomitrium patens HOM05D006362 ORTHO05D008295 2.3e-166 589.7 559 54.9
Gohir.D05G366200 Gossypium hirsutum HOM05D006362 ORTHO05D008295 3.2e-163 579.3 426 69.0
vmacro11753 Vaccinium macrocarpon HOM05D006362 ORTHO05D008295 6.8e-158 561.6 689 47.2
SMO115G0345 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 3.6e-151 539.3 560 53.8
HPP92_009392 Vanilla planifolia HOM05D006362 ORTHO05D008295 6.6e-145 518.5 275 98.2
AagrBONN_evm.TU.Sc2ySwM_117.2426 Anthoceros agrestis HOM05D006362 ORTHO05D008295 1.4e-142 510.8 561 47.8
Pp3c23_6050 Physcomitrium patens HOM05D006362 ORTHO05D008295 6.9e-142 508.4 558 52.0
BolC3t17019H Brassica oleracea HOM05D006362 ORTHO05D008295 3.9e-113 412.9 323 67.2
Zm00001eb070060 Zea mays HOM05D006362 ORTHO05D008295 3.8e-100 369.8 283 67.1
PGSC0003DMG403014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 1.6e-98 364.4 277 67.5
CSS0013960 Camellia sinensis var. sinensis HOM05D006362 ORTHO05D008295 5.3e-86 322.8 220 71.8
PGSC0003DMG402014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 1.4e-70 271.6 190 67.4
SEGI_18975 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 3.3e-51 207.2 163 65.6
CBR_g57499 Chara braunii HOM05D006362 ORTHO05D008295 6.2e-50 203.0 240 45.0
Rhsim12G0205700 Rhododendron simsii HOM05D006362 ORTHO05D008295 4.9e-47 193.4 295 42.4
SHI31860 Sapria himalayana HOM05D006362 ORTHO05D008295 1.8e-41 174.9 141 61.0
HPP92_009393 Vanilla planifolia HOM05D006362 ORTHO05D008295 6.8e-41 172.9 121 73.6
Gorai.002G084600 Gossypium raimondii HOM05D006362 ORTHO05D008295 2.2e-39 167.9 120 71.7
Gohir.D01G063866 Gossypium hirsutum HOM05D006362 ORTHO05D008295 1.2e-37 162.2 120 70.0
Cpa.g.sc131.92 Carica papaya HOM05D006362 ORTHO05D008295 5.1e-36 156.8 114 66.7
SEGI_13710 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 1.1e-35 155.6 132 59.1
VMungo0251G2436 Vigna mungo HOM05D006362 ORTHO05D008295 2.2e-31 141.4 108 63.9
Hma1.2p1_1609F.1_g293480 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 3.4e-24 117.5 104 62.5
SMO347G0562 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.4e-22 112.1 180 41.1
SMO228G0126 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.9e-19 101.7 192 36.5
CBR_g57501 Chara braunii HOM05D006362 ORTHO05D008295 7.4e-19 99.8 123 43.9
HanXRQChr16g0507081 Helianthus annuus HOM05D006362 ORTHO05D008295 2.2e-15 88.2 78 57.7
SMO111G0176 Selaginella moellendorffii HOM05D013632 ORTHO05D008295 5.5e-14 83.6 96 44.8
SMO167G0061 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 7.1e-14 83.2 142 40.8
SMO122G0015 Selaginella moellendorffii HOM05D006362 ORTHO05D374567 2.8e-10 71.2 129 33.3
Cc02_g13940 Coffea canephora HOM05D006362 ORTHO05D008295 1.8e-09 68.6 55 67.3
BcaB04g20946 Brassica carinata HOM05D006362 ORTHO05D008295 2.4e-09 68.2 45 68.9
SMO009G0006 Selaginella moellendorffii HOM05D013632 ORTHO05D379378 1.0e-07 62.8 93 40.9
SMO118G0508 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 2.9e-07 61.2 210 26.2
SMO014G0021 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 7.1e-06 56.6 174 29.3
SMO144G0005 Selaginella moellendorffii HOM05D013632 ORTHO05D378182 9.3e-06 56.2 78 38.5


User provided reference genes

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