Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008648 Vanilla planifolia HOM05D003776 ORTHO05D004459 8.2e-194 680.2 353 100.0
HPP92_008667 Vanilla planifolia HOM05D003776 ORTHO05D004459 9.2e-129 464.2 357 74.2
ClCG11G003010 Citrullus lanatus HOM05D003776 ORTHO05D004459 2.1e-96 356.7 309 57.9
Nn8g39448 Nelumbo nucifera HOM05D003776 ORTHO05D004459 4.3e-94 349.0 367 51.8
TAR625G0211 Trochodendron aralioides HOM05D003776 ORTHO05D004459 9.6e-94 347.8 366 52.2
Aqoxy3G01756 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 4.5e-91 339.0 358 51.4
Os02g0202250 Oryza sativa ssp. japonica HOM05D003776 ORTHO05D004459 7.6e-91 338.2 357 51.3
Aqoxy7G02178 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 2.9e-90 336.3 359 51.5
Actinidia26393 Actinidia chinensis HOM05D003776 ORTHO05D004459 8.5e-90 334.7 358 50.6
PSO170G4267 Papaver somniferum HOM05D003776 ORTHO05D004459 3.2e-89 332.8 356 51.1
Dinv36529 Davidia involucrata HOM05D003776 ORTHO05D004459 4.2e-89 332.4 367 51.0
PSO455G0084 Papaver somniferum HOM05D003776 ORTHO05D004459 1.2e-88 330.9 356 50.8
MELO3C004510.2 Cucumis melo HOM05D003776 ORTHO05D004459 2.7e-88 329.7 366 48.9
CsaV3_2G002830 Cucumis sativus L. HOM05D003776 ORTHO05D004459 2.7e-88 329.7 366 48.9
ATR0322G072 Amborella trichopoda HOM05D003776 ORTHO05D004459 6.1e-88 328.6 380 47.6
vmacro06129 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 1.0e-87 327.8 366 49.5
Rhsim03G0247900 Rhododendron simsii HOM05D003776 ORTHO05D004459 1.3e-87 327.4 414 46.9
Thecc.09G126200 Theobroma cacao HOM05D003776 ORTHO05D004459 1.3e-87 327.4 400 46.2
TWI34G1787 Tripterygium wilfordii HOM05D003776 ORTHO05D004459 3.9e-87 325.9 366 49.2
GSVIVG01015528001 Vitis vinifera HOM05D003776 ORTHO05D004459 5.1e-87 325.5 366 49.7
Sed0006794 Sechium edule HOM05D003776 ORTHO05D004459 8.7e-87 324.7 366 48.1
Gohir.A07G035800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 1.9e-86 323.6 363 49.6
Sc08g0006640 Simmondsia chinensis HOM05D003776 ORTHO05D004459 7.4e-86 321.6 355 48.5
Zm00001eb235620 Zea mays HOM05D003776 ORTHO05D004459 7.4e-86 321.6 362 49.2
Gorai.001G042000 Gossypium raimondii HOM05D003776 ORTHO05D004459 1.6e-85 320.5 363 48.8
PGR102G3028 Punica granatum HOM05D003776 ORTHO05D004459 1.6e-85 320.5 347 49.3
CANSAT11G0130 Cannabis sativa HOM05D003776 ORTHO05D004459 2.2e-85 320.1 366 48.6
Gohir.D07G039800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 2.8e-85 319.7 363 49.0
Duzib168G2222 Durio zibethinus HOM05D003776 ORTHO05D004459 4.8e-85 318.9 395 46.3
MD02G1032900 Malus domestica HOM05D003776 ORTHO05D004459 1.4e-84 317.4 366 48.9
Medtr7g099880 Medicago truncatula HOM05D003776 ORTHO05D004459 6.9e-84 315.1 347 50.4
Potri.006G119600 Populus trichocarpa HOM05D003776 ORTHO05D004459 1.2e-83 314.3 355 49.3
Prupe.7G242500 Prunus persica HOM05D003776 ORTHO05D004459 1.2e-83 314.3 355 47.9
Ciclev10007244m.g Citrus clementina HOM05D003776 ORTHO05D004459 2.0e-83 313.5 366 46.7
Hund09133 Selenicereus undatus HOM05D003776 ORTHO05D004459 2.6e-83 313.2 349 49.9
Manes.05G119700 Manihot esculenta HOM05D003776 ORTHO05D004459 5.9e-83 312.0 366 45.9
Solyc12g006480.2 Solanum lycopersicum HOM05D003776 ORTHO05D004459 5.9e-83 312.0 355 48.5
Sopen12g002420 Solanum pennellii HOM05D003776 ORTHO05D004459 5.9e-83 312.0 355 48.5
TPR.G21471 Trifolium pratense HOM05D003776 ORTHO05D004459 1.3e-82 310.8 347 50.7
Cfa003371 Carpinus fangiana HOM05D003776 ORTHO05D004459 2.2e-82 310.1 355 48.5
Glyma.06G222100 Glycine max HOM05D003776 ORTHO05D004459 2.2e-82 310.1 353 48.7
CiPaw.03G244000 Carya illinoinensis HOM05D003776 ORTHO05D004459 3.8e-82 309.3 366 46.4
Lj7C629G11 Lonicera japonica HOM05D003776 ORTHO05D004459 3.8e-82 309.3 342 50.3
AUR62013362 Chenopodium quinoa HOM05D003776 ORTHO05D004459 5.0e-82 308.9 347 49.3
Lsat_1_v5_gn_5_96021 Lactuca sativa HOM05D003776 ORTHO05D004459 6.5e-82 308.5 377 45.4
Psat1g024680 Pisum sativum HOM05D003776 ORTHO05D004459 6.5e-82 308.5 355 49.0
AUR62011127 Chenopodium quinoa HOM05D003776 ORTHO05D004459 8.5e-82 308.1 347 49.0
Eucgr.C04218 Eucalyptus grandis HOM05D003776 ORTHO05D004459 1.1e-81 307.8 366 46.2
EL10Ac8g18652 Beta vulgaris HOM05D003776 ORTHO05D004459 2.5e-81 306.6 347 49.0
Lalb_Chr08g0234811 Lupinus albus HOM05D003776 ORTHO05D004459 7.2e-81 305.1 347 49.0
QL02p088328 Quercus lobata HOM05D003776 ORTHO05D004459 7.2e-81 305.1 366 46.4
Ca_14403_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 1.2e-80 304.3 355 48.7
Atru.chr7.1164 Acer truncatum HOM05D003776 ORTHO05D004459 1.6e-80 303.9 366 46.7
Phvul.009G198200 Phaseolus vulgaris HOM05D003776 ORTHO05D004459 2.7e-80 303.1 371 47.4
DCAR_017818 Daucus carota HOM05D003776 ORTHO05D004459 4.6e-80 302.4 408 45.3
FAN19G1245 Fragaria x ananassa HOM05D003776 ORTHO05D004459 4.6e-80 302.4 366 45.1
Lj3g0001115 Lotus japonicus HOM05D003776 ORTHO05D004459 4.6e-80 302.4 355 49.0
FvH4_1g03320 Fragaria vesca HOM05D003776 ORTHO05D004459 7.9e-80 301.6 366 45.4
FAN28G2120 Fragaria x ananassa HOM05D003776 ORTHO05D004459 7.9e-80 301.6 366 45.1
RcHm_v2.0_Chr2g0088511 Rosa chinensis HOM05D003776 ORTHO05D004459 7.9e-80 301.6 366 45.9
CDE02G1576 Ceratophyllum demersum HOM05D003776 ORTHO05D004459 1.0e-79 301.2 360 48.1
HanXRQChr10g0315491 Helianthus annuus HOM05D003776 ORTHO05D004459 1.0e-79 301.2 366 44.8
ECA234G1804 Erigeron canadensis HOM05D003776 ORTHO05D004459 1.8e-79 300.4 376 43.6
Thhalv10002339m.g Eutrema salsugineum HOM05D003776 ORTHO05D004459 1.8e-79 300.4 355 47.0
THA.LOC104808989 Tarenaya hassleriana HOM05D003776 ORTHO05D004459 1.8e-79 300.4 355 47.3
Cc06_g08530 Coffea canephora HOM05D003776 ORTHO05D004459 2.3e-79 300.1 394 46.7
Sabra06G0094200 Salix brachista HOM05D003776 ORTHO05D004459 2.3e-79 300.1 399 44.4
VMungo1309G0107 Vigna mungo HOM05D003776 ORTHO05D004459 3.0e-79 299.7 384 46.1
Lalb_Chr11g0072121 Lupinus albus HOM05D003776 ORTHO05D004459 6.7e-79 298.5 353 47.6
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 1.5e-78 297.4 357 47.1
FAN23G1640 Fragaria x ananassa HOM05D003776 ORTHO05D004459 3.3e-78 296.2 366 44.3
FAN26G1438 Fragaria x ananassa HOM05D003776 ORTHO05D004459 3.3e-78 296.2 366 44.3
C07p25670 Brassica napus HOM05D003776 ORTHO05D004459 4.4e-78 295.8 355 46.8
BolC7t43085H Brassica oleracea HOM05D003776 ORTHO05D004459 4.4e-78 295.8 355 46.8
SEGI_34338 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 4.4e-78 295.8 356 46.3
Peaxi162Scf01211g00016 Petunia axillaris HOM05D003776 ORTHO05D004459 5.7e-78 295.4 324 49.4
BraA07t29494Z Brassica rapa HOM05D003776 ORTHO05D004459 3.7e-77 292.7 367 45.5
Hma1.2p1_0018F.1_g012430 Hydrangea macrophylla HOM05D003776 ORTHO05D004459 1.8e-76 290.4 438 40.9
MSTRG.19598 Avicennia marina HOM05D003776 ORTHO05D004459 1.0e-74 284.6 355 44.5
Migut.J01158 Erythranthe guttata HOM05D003776 ORTHO05D004459 3.8e-74 282.7 356 45.2
Nitab4.5_0002658g0150 Nicotiana tabacum HOM05D003776 ORTHO05D004459 2.1e-72 276.9 355 46.2
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 3.7e-69 266.2 367 43.3
Haze_25580 Corylus avellana HOM05D003776 ORTHO05D004459 1.4e-68 264.2 355 43.9
arahy.Tifrunner.gnm1.ann1.GK8SHH Arachis hypogaea HOM05D003776 ORTHO05D004459 3.1e-68 263.1 310 48.7
Pp3c4_20350 Physcomitrium patens HOM05D003776 ORTHO05D004459 2.2e-66 256.9 356 42.1
Ah.09g226220 Amaranthus hybridus HOM05D003776 ORTHO05D004459 6.5e-66 255.4 229 57.2
A07p17720 Brassica napus HOM05D003776 ORTHO05D004459 8.5e-66 255.0 229 58.1
Sp4g09050 Schrenkiella parvula HOM05D003776 ORTHO05D004459 1.5e-65 254.2 229 57.6
Oeu055885.1 Olea europaea HOM05D003776 ORTHO05D004459 1.2e-64 251.1 304 46.7
Carub.0008s1091 Capsella rubella HOM05D003776 ORTHO05D004459 1.6e-64 250.8 229 56.8
AagrBONN_evm.TU.Sc2ySwM_228.87 Anthoceros agrestis HOM05D003776 ORTHO05D004459 2.1e-64 250.4 366 41.3
Mapoly0052s0095 Marchantia polymorpha HOM05D003776 ORTHO05D004459 1.0e-63 248.1 357 40.9
AL8G25470 Arabidopsis lyrata HOM05D003776 ORTHO05D004459 5.2e-63 245.7 229 55.9
AT5G51200 Arabidopsis thaliana HOM05D003776 ORTHO05D004459 5.2e-63 245.7 229 55.9
CARHR118630 Cardamine hirsuta HOM05D003776 ORTHO05D004459 6.7e-63 245.4 231 55.4
Nitab4.5_0008846g0010 Nicotiana tabacum HOM05D003776 ORTHO05D004459 5.7e-62 242.3 342 44.7
Duzib187G1323 Durio zibethinus HOM05D003776 ORTHO05D004459 1.3e-58 231.1 364 40.1
Cpa.g.sc75.31 Carica papaya HOM05D003776 ORTHO05D004459 1.6e-56 224.2 248 50.8
CAN.G816.2 Capsicum annuum HOM05D003776 ORTHO05D004459 1.0e-55 221.5 193 58.0
SMO347G0235 Selaginella moellendorffii HOM05D003776 ORTHO05D004459 1.8e-55 220.7 357 38.4
CBR_g37692 Chara braunii HOM05D003776 ORTHO05D004459 5.9e-51 205.7 360 37.5
Zm00001eb121860 Zea mays HOM05D003776 ORTHO05D005656 7.2e-49 198.7 179 58.1
Lsat_1_v5_gn_7_7080 Lactuca sativa HOM05D003776 ORTHO05D004459 5.9e-43 179.1 290 40.7
RcHm_v2.0_Chr4g0403131 Rosa chinensis HOM05D003776 ORTHO05D004459 1.4e-39 167.9 213 44.1
RcHm_v2.0_Chr4g0403161 Rosa chinensis HOM05D003776 ORTHO05D004459 1.4e-39 167.9 213 44.1
Lsat_1_v5_gn_3_39400 Lactuca sativa HOM05D003776 ORTHO05D004459 1.4e-31 141.4 206 41.3
RcHm_v2.0_Chr2g0152361 Rosa chinensis HOM05D003776 ORTHO05D004459 5.0e-26 122.9 227 36.6
Psat7g006280 Pisum sativum HOM05D003776 ORTHO05D004459 1.4e-23 114.8 117 53.8
RcHm_v2.0_Chr3g0479611 Rosa chinensis HOM05D003776 ORTHO05D004459 4.0e-23 113.2 98 58.2
FvH4_6g38782 Fragaria vesca HOM05D003776 ORTHO05D004459 2.9e-21 107.1 243 31.7
RcHm_v2.0_Chr2g0152391 Rosa chinensis HOM05D003776 ORTHO05D004459 5.6e-17 92.8 120 41.7
COL.COLO4_35084 Corchorus olitorius HOM05D003776 ORTHO05D004459 2.9e-13 80.5 70 52.9
Lsat_1_v5_gn_5_62781 Lactuca sativa HOM05D003776 ORTHO05D004459 1.2e-11 75.1 264 27.3
MD16G1253500 Malus domestica HOM05D003776 ORTHO05D004459 5.1e-10 69.7 106 39.6


User provided reference genes

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