Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 3.9e-131 471.5 235 100.0
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 2.1e-60 236.5 235 53.2
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 1.4e-59 233.8 235 52.8
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.4e-59 233.8 237 52.7
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.8e-59 233.4 235 53.6
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 3.0e-59 232.6 254 52.0
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 3.9e-59 232.3 235 51.5
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 3.9e-59 232.3 250 52.0
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 4.3e-58 228.8 251 50.2
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 5.7e-58 228.4 238 52.5
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 7.4e-58 228.0 250 51.2
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 9.7e-58 227.6 252 51.2
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 9.7e-58 227.6 252 51.2
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 2.2e-57 226.5 234 52.1
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 2.8e-57 226.1 235 53.2
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 3.7e-57 225.7 190 59.5
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 1.8e-56 223.4 242 52.1
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 1.8e-56 223.4 234 49.6
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 6.9e-56 221.5 265 49.4
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 3.4e-55 219.2 245 49.0
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 4.5e-55 218.8 245 50.2
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 4.5e-55 218.8 235 50.6
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 5.9e-55 218.4 242 51.2
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 8.5e-54 214.5 244 49.6
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 8.5e-54 214.5 242 49.2
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 2.5e-53 213.0 241 49.8
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 5.5e-53 211.8 235 48.9
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 7.2e-53 211.5 251 48.6
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 1.6e-52 210.3 247 49.0
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 2.7e-52 209.5 239 51.9
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 3.6e-52 209.1 198 54.5
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 3.6e-52 209.1 244 51.2
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 4.7e-52 208.8 156 64.7
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 1.0e-51 207.6 152 64.5
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 3.0e-51 206.1 242 49.2
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 3.9e-51 205.7 152 63.2
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 5.1e-51 205.3 220 50.5
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 1.1e-50 204.1 239 48.5
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 1.5e-50 203.8 240 49.2
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 2.0e-50 203.4 220 52.3
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 3.3e-50 202.6 237 48.5
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 7.4e-50 201.4 239 47.3
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 9.7e-50 201.1 245 49.0
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 9.7e-50 201.1 251 47.0
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 1.3e-49 200.7 242 47.5
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 1.3e-49 200.7 152 65.8
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 2.8e-49 199.5 248 46.8
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 3.7e-49 199.1 251 46.2
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 6.3e-49 198.4 206 51.0
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 1.1e-48 197.6 155 63.2
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 1.1e-48 197.6 238 47.1
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 1.1e-48 197.6 242 47.1
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 1.8e-48 196.8 243 46.1
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 2.4e-48 196.4 251 47.8
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 3.1e-48 196.1 244 46.3
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 3.1e-48 196.1 148 63.5
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 3.1e-48 196.1 238 47.1
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 7.0e-48 194.9 252 46.0
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 9.1e-48 194.5 236 47.0
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 1.2e-47 194.1 250 46.0
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 3.5e-47 192.6 241 46.5
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 3.5e-47 192.6 239 47.3
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 4.5e-47 192.2 238 44.5
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 4.5e-47 192.2 237 44.7
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 5.9e-47 191.8 270 43.7
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 5.9e-47 191.8 245 44.5
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 7.7e-47 191.4 246 45.1
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 1.0e-46 191.0 152 59.2
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 3.8e-46 189.1 153 60.8
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 6.5e-46 188.3 239 44.8
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 1.1e-45 187.6 240 46.2
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.1e-45 187.6 200 48.5
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 1.1e-45 187.6 190 51.1
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 1.1e-45 187.6 251 48.6
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 2.5e-45 186.4 242 45.0
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 2.5e-45 186.4 246 45.1
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 2.5e-45 186.4 250 44.0
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 2.5e-45 186.4 247 45.3
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 3.2e-45 186.0 150 61.3
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 3.2e-45 186.0 239 44.4
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 3.2e-45 186.0 230 45.2
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 4.2e-45 185.7 245 43.3
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 5.5e-45 185.3 151 57.0
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 5.5e-45 185.3 213 46.9
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 7.2e-45 184.9 202 48.5
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 7.2e-45 184.9 245 43.3
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 7.2e-45 184.9 225 49.3
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 7.2e-45 184.9 199 47.7
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 1.2e-44 184.1 200 48.0
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 1.2e-44 184.1 243 44.9
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 2.1e-44 183.3 237 42.2
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 2.7e-44 183.0 248 44.8
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 2.7e-44 183.0 243 44.4
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 6.1e-44 181.8 241 44.0
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 6.1e-44 181.8 241 44.0
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 6.1e-44 181.8 250 44.8
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 6.1e-44 181.8 249 44.6
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 1.0e-43 181.0 177 51.4
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 1.4e-43 180.6 241 44.4
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 1.8e-43 180.3 156 57.1
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 1.8e-43 180.3 240 45.0
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 1.8e-43 180.3 149 59.7
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 1.8e-43 180.3 151 58.9
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.3e-43 179.9 255 43.9
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.3e-43 179.9 246 44.3
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 3.0e-43 179.5 249 43.4
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 4.0e-43 179.1 240 45.0
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 5.2e-43 178.7 177 51.4
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 5.2e-43 178.7 235 43.0
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 6.7e-43 178.3 148 58.1
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 1.1e-42 177.6 132 64.4
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 3.3e-42 176.0 253 42.3
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 3.3e-42 176.0 151 55.0
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 4.4e-42 175.6 246 44.3
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 7.5e-42 174.9 252 42.5
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 7.5e-42 174.9 243 44.4
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 9.7e-42 174.5 246 41.5
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 9.7e-42 174.5 246 43.1
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 1.3e-41 174.1 149 56.4
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 1.3e-41 174.1 240 47.1
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 3.7e-41 172.6 238 44.5
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 3.7e-41 172.6 245 40.8
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 6.3e-41 171.8 243 42.8
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 1.8e-40 170.2 240 44.2
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 2.4e-40 169.9 236 42.4
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 2.4e-40 169.9 150 58.0
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 7.0e-40 168.3 203 46.3
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 6.5e-38 161.8 239 43.9
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 8.5e-38 161.4 145 54.5
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 8.5e-38 161.4 185 45.4
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 2.7e-36 156.4 191 45.5
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 6.8e-35 151.8 151 52.3
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 8.8e-35 151.4 131 57.3
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 1.5e-34 150.6 173 45.1
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 1.5e-34 150.6 131 55.7
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 4.8e-33 145.6 240 41.2
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.4e-32 143.3 142 51.4
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 1.1e-29 134.4 245 39.2
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 7.2e-29 131.7 110 61.8
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 4.0e-27 125.9 131 48.9
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 2.0e-23 113.6 167 40.7
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 1.2e-20 104.4 75 66.7
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 4.1e-16 89.4 55 72.7
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 3.5e-15 86.3 134 38.8
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 5.9e-15 85.5 77 53.2
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 2.3e-14 83.6 191 33.5
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 3.0e-14 83.2 56 66.1
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 1.9e-13 80.5 58 62.1
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 3.3e-13 79.7 89 44.9
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 5.2e-11 72.4 72 48.6
CDE09G0250 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 3.4e-10 69.7 47 66.0
CBR_g83324 Chara braunii HOM05D004719 ORTHO05D005519 4.1e-08 62.8 73 39.7
MCO03G325 Micromonas commoda HOM05D004719 ORTHO05D005519 7.0e-08 62.0 128 35.2
Sopen06g012490 Solanum pennellii HOM05D004719 ORTHO05D005519 3.0e-06 56.6 51 54.9
CBR_g84869 Chara braunii HOM05D004719 ORTHO05D005519 5.0e-06 55.8 151 32.5


User provided reference genes

Program Settings