Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008170 Vanilla planifolia HOM05D000771 ORTHO05D001963 3.4e-167 591.7 314 100.0
HPP92_023159 Vanilla planifolia HOM05D000771 ORTHO05D001963 8.2e-20 102.1 302 35.1
Actinidia38736 Actinidia chinensis HOM05D000771 ORTHO05D001963 3.0e-14 83.6 292 28.8
Duzib187G1926 Durio zibethinus HOM05D000771 ORTHO05D001963 8.8e-14 82.0 177 37.3
Lj4g0000070 Lotus japonicus HOM05D000771 ORTHO05D001963 2.0e-13 80.9 151 39.1
Prupe.7G245300 Prunus persica HOM05D000771 ORTHO05D001963 2.6e-13 80.5 253 32.8
Ah.14g079700 Amaranthus hybridus HOM05D000771 ORTHO05D001963 3.3e-13 80.1 278 30.2
Actinidia40484 Actinidia chinensis HOM05D000771 ORTHO05D001963 4.4e-13 79.7 172 34.9
AUR62011150 Chenopodium quinoa HOM05D000771 ORTHO05D001963 4.4e-13 79.7 210 35.7
Gohir.D05G016400 Gossypium hirsutum HOM05D000771 ORTHO05D001963 4.4e-13 79.7 253 32.4
VMungo1215G1714 Vigna mungo HOM05D000771 ORTHO05D001963 4.4e-13 79.7 227 33.0
Haze_25556 Corylus avellana HOM05D000771 ORTHO05D001963 5.7e-13 79.3 213 33.3
RcHm_v2.0_Chr2g0088151 Rosa chinensis HOM05D000771 ORTHO05D001963 7.4e-13 79.0 252 31.0
CDE02G4567 Ceratophyllum demersum HOM05D000771 ORTHO05D001963 2.2e-12 77.4 145 37.2
Actinidia21973 Actinidia chinensis HOM05D000771 ORTHO05D001963 2.8e-12 77.0 152 38.2
CiPaw.03G245800 Carya illinoinensis HOM05D000771 ORTHO05D001963 2.8e-12 77.0 131 38.2
CDE04G3409 Ceratophyllum demersum HOM05D000771 ORTHO05D001963 6.3e-12 75.9 182 32.4
Hma1.2p1_0931F.1_g238130 Hydrangea macrophylla HOM05D000771 ORTHO05D001963 6.3e-12 75.9 119 39.5
Nn6g34621 Nelumbo nucifera HOM05D000771 ORTHO05D001963 6.3e-12 75.9 162 36.4
VMungo0331G0470 Vigna mungo HOM05D000771 ORTHO05D001963 1.4e-11 74.7 134 37.3
Psat4g037360 Pisum sativum HOM05D000771 ORTHO05D001963 1.8e-11 74.3 249 30.5
GSVIVG01015565001 Vitis vinifera HOM05D000771 ORTHO05D001963 1.8e-11 74.3 221 30.8
MBI01_g29251_MAGBIO Magnolia biondii HOM05D000771 ORTHO05D001963 2.4e-11 73.9 220 32.7
Medtr4g114770 Medicago truncatula HOM05D000771 ORTHO05D001963 3.1e-11 73.6 220 31.8
HanXRQChr06g0180421 Helianthus annuus HOM05D000771 ORTHO05D001963 4.1e-11 73.2 103 44.7
Glyma.04G154300 Glycine max HOM05D000771 ORTHO05D001963 7.0e-11 72.4 95 45.3
MD02G1029600 Malus domestica HOM05D000771 ORTHO05D001963 9.1e-11 72.0 94 47.9
ATR0697G213 Amborella trichopoda HOM05D000771 ORTHO05D001963 1.2e-10 71.6 173 34.7
DCAR_014893 Daucus carota HOM05D000771 ORTHO05D001963 1.2e-10 71.6 312 27.9
Duzib235G0668 Durio zibethinus HOM05D000771 ORTHO05D001963 1.2e-10 71.6 238 29.8
FvH4_1g03020 Fragaria vesca HOM05D000771 ORTHO05D001963 1.2e-10 71.6 142 37.3
FAN13G2533 Fragaria x ananassa HOM05D000771 ORTHO05D001963 1.2e-10 71.6 97 43.3
FAN28G2420 Fragaria x ananassa HOM05D000771 ORTHO05D001963 1.2e-10 71.6 142 37.3
Potri.018G129700 Populus trichocarpa HOM05D000771 ORTHO05D001963 1.2e-10 71.6 95 45.3
PGR102G2200 Punica granatum HOM05D000771 ORTHO05D001963 1.2e-10 71.6 133 39.8
FAN23G1760 Fragaria x ananassa HOM05D000771 ORTHO05D001963 1.6e-10 71.2 211 30.8
Gorai.009G016600 Gossypium raimondii HOM05D000771 ORTHO05D001963 1.6e-10 71.2 305 27.2
Dinv33551 Davidia involucrata HOM05D000771 ORTHO05D001963 2.0e-10 70.9 132 36.4
FAN26G1268 Fragaria x ananassa HOM05D000771 ORTHO05D001963 2.0e-10 70.9 136 37.5
Glyma.06G224700 Glycine max HOM05D000771 ORTHO05D001963 2.0e-10 70.9 99 45.5
QL02p088992 Quercus lobata HOM05D000771 ORTHO05D001963 2.0e-10 70.9 308 26.6
Gohir.A05G015300 Gossypium hirsutum HOM05D000771 ORTHO05D001963 2.6e-10 70.5 305 28.9
QL01p019266 Quercus lobata HOM05D000771 ORTHO05D001963 2.6e-10 70.5 172 33.7
Cfa003393 Carpinus fangiana HOM05D000771 ORTHO05D001963 3.5e-10 70.1 182 31.9
HPP92_024113 Vanilla planifolia HOM05D000771 ORTHO05D001963 3.5e-10 70.1 139 37.4
CSS0049938 Camellia sinensis var. sinensis HOM05D000771 ORTHO05D001963 4.5e-10 69.7 200 32.5
Manes.14G133700 Manihot esculenta HOM05D000771 ORTHO05D001963 4.5e-10 69.7 187 35.8
HanXRQChr09g0241661 Helianthus annuus HOM05D000771 ORTHO05D001963 5.9e-10 69.3 97 44.3
Glyma.15G007700 Glycine max HOM05D000771 ORTHO05D001963 7.7e-10 68.9 114 41.2
Lalb_Chr12g0198011 Lupinus albus HOM05D000771 ORTHO05D001963 7.7e-10 68.9 141 37.6
CANSAT11G2574 Cannabis sativa HOM05D000771 ORTHO05D001963 1.0e-09 68.6 196 31.1
Ciclev10025929m.g Citrus clementina HOM05D000771 ORTHO05D001963 1.3e-09 68.2 98 42.9
Dinv36506 Davidia involucrata HOM05D000771 ORTHO05D001963 1.3e-09 68.2 97 44.3
Lsat_1_v5_gn_8_59200 Lactuca sativa HOM05D000771 ORTHO05D001963 1.3e-09 68.2 128 37.5
Peaxi162Scf00313g00818 Petunia axillaris HOM05D000771 ORTHO05D001963 1.3e-09 68.2 99 42.4
CiPaw.01G247100 Carya illinoinensis HOM05D000771 ORTHO05D001963 1.7e-09 67.8 116 42.2
TAR626G1272 Trochodendron aralioides HOM05D000771 ORTHO05D001963 1.7e-09 67.8 229 31.0
Dinv41494 Davidia involucrata HOM05D000771 ORTHO05D001963 2.2e-09 67.4 263 27.8
Potri.006G067700 Populus trichocarpa HOM05D000771 ORTHO05D001963 2.2e-09 67.4 92 44.6
CSS0003170 Camellia sinensis var. sinensis HOM05D000020 ORTHO05D000543 2.9e-09 67.0 229 31.9
Ca_06924_v3 Cicer arietinum L. HOM05D000771 ORTHO05D001963 2.9e-09 67.0 308 27.9
Cc06_g08300 Coffea canephora HOM05D000771 ORTHO05D001963 2.9e-09 67.0 299 28.4
Lalb_Chr01g0012381 Lupinus albus HOM05D000771 ORTHO05D001963 2.9e-09 67.0 234 28.6
Nitab4.5_0001349g0070 Nicotiana tabacum HOM05D000771 ORTHO05D001963 2.9e-09 67.0 173 33.5
TPR.G26494 Trifolium pratense HOM05D000771 ORTHO05D001963 2.9e-09 67.0 116 39.7
HPP92_024120 Vanilla planifolia HOM05D000771 ORTHO05D001963 2.9e-09 67.0 139 36.7
CSS0046272 Camellia sinensis var. sinensis HOM05D000020 ORTHO05D000543 3.8e-09 66.6 229 31.4
Glyma.04G154500 Glycine max HOM05D000771 ORTHO05D001963 3.8e-09 66.6 160 34.4
Glyma.13G365500 Glycine max HOM05D000771 ORTHO05D001963 3.8e-09 66.6 102 42.2
Gorai.011G083900 Gossypium raimondii HOM05D000771 ORTHO05D001963 3.8e-09 66.6 109 40.4
Solyc12g009590.2 Solanum lycopersicum HOM05D000771 ORTHO05D001963 3.8e-09 66.6 130 37.7
Thecc.09G128800 Theobroma cacao HOM05D000771 ORTHO05D001963 3.8e-09 66.6 321 27.4
GSVIVG01036046001 Vitis vinifera HOM05D000771 ORTHO05D001963 3.8e-09 66.6 233 29.2
Cfa010208 Carpinus fangiana HOM05D000771 ORTHO05D001963 5.0e-09 66.2 147 34.7
CsaV3_2G002970 Cucumis sativus L. HOM05D000771 ORTHO05D001963 5.0e-09 66.2 134 38.1
PSO339G4013 Papaver somniferum HOM05D000771 ORTHO05D001963 5.0e-09 66.2 178 29.8
TAR383G1099 Trochodendron aralioides HOM05D000771 ORTHO05D001350 5.0e-09 66.2 327 26.9
SalBow6G6639 Salvia bowleyana HOM05D000771 ORTHO05D001963 6.5e-09 65.9 350 29.1
Sed0018562 Sechium edule HOM05D000771 ORTHO05D001963 6.5e-09 65.9 136 38.2
AT3G15790 Arabidopsis thaliana HOM05D000771 ORTHO05D001963 8.5e-09 65.5 217 31.3
Gohir.A10G073600 Gossypium hirsutum HOM05D000771 ORTHO05D001963 8.5e-09 65.5 109 40.4
Rhsim03G0249400 Rhododendron simsii HOM05D000771 ORTHO05D001963 8.5e-09 65.5 291 27.5
Duzib150G1691 Durio zibethinus HOM05D000771 ORTHO05D001963 1.1e-08 65.1 317 26.5
Gohir.A06G054800 Gossypium hirsutum HOM05D000771 ORTHO05D001963 1.1e-08 65.1 289 29.4
Gohir.D10G077500 Gossypium hirsutum HOM05D000771 ORTHO05D001963 1.1e-08 65.1 109 39.4
Manes.04G113200 Manihot esculenta HOM05D000771 ORTHO05D001963 1.1e-08 65.1 348 26.1
Prupe.3G086000 Prunus persica HOM05D000771 ORTHO05D001963 1.1e-08 65.1 109 38.5
PGSC0003DMG400002913 Solanum tuberosum HOM05D000771 ORTHO05D001963 1.1e-08 65.1 130 36.9
Aa31LG4G410 Aethionema arabicum HOM05D000771 ORTHO05D001963 1.9e-08 64.3 140 37.1
CsaV3_7G032420 Cucumis sativus L. HOM05D000771 ORTHO05D001963 1.9e-08 64.3 118 39.0
FAN14G0554 Fragaria x ananassa HOM05D000771 ORTHO05D001963 1.9e-08 64.3 286 27.3
Hma1.2p1_1144F.1_g261230 Hydrangea macrophylla HOM05D000771 ORTHO05D001963 1.9e-08 64.3 338 26.9
Lsat_1_v5_gn_5_95060 Lactuca sativa HOM05D000771 ORTHO05D001963 1.9e-08 64.3 143 34.3
MELO3C004492.2 Cucumis melo HOM05D000771 ORTHO05D001963 2.5e-08 63.9 309 29.1
GSVIVG01017330001 Vitis vinifera HOM05D000771 ORTHO05D001963 2.5e-08 63.9 198 31.3
CiPaw.04G172700 Carya illinoinensis HOM05D000771 ORTHO05D001963 3.2e-08 63.5 310 27.1
ClCG09G002910 Citrullus lanatus HOM05D000771 ORTHO05D001963 3.2e-08 63.5 97 39.2
COL.COLO4_12958 Corchorus olitorius HOM05D000771 ORTHO05D001963 3.2e-08 63.5 121 37.2
DCAR_020917 Daucus carota HOM05D000771 ORTHO05D001963 3.2e-08 63.5 203 31.0
Dinv38118 Davidia involucrata HOM05D000771 ORTHO05D001963 3.2e-08 63.5 299 29.4
Duzib160G0079 Durio zibethinus HOM05D000771 ORTHO05D001963 3.2e-08 63.5 124 37.9
ECA234G1899 Erigeron canadensis HOM05D000771 ORTHO05D001963 3.2e-08 63.5 100 42.0
HanXRQChr12g0356761 Helianthus annuus HOM05D000771 ORTHO05D001963 3.2e-08 63.5 163 35.0
Manes.06G057100 Manihot esculenta HOM05D000771 ORTHO05D001963 3.2e-08 63.5 321 28.0
Phvul.009G205300 Phaseolus vulgaris HOM05D000771 ORTHO05D001963 3.2e-08 63.5 312 27.2
QL05p029652 Quercus lobata HOM05D000771 ORTHO05D001963 3.2e-08 63.5 277 26.7
TWI34G0240 Tripterygium wilfordii HOM05D000771 ORTHO05D001963 3.2e-08 63.5 166 33.7
Duzib192G0222 Durio zibethinus HOM05D000771 ORTHO05D001963 4.2e-08 63.2 212 29.7
Phvul.010G155700 Phaseolus vulgaris HOM05D000771 ORTHO05D001963 4.2e-08 63.2 114 39.5
arahy.Tifrunner.gnm1.ann1.BMRM52 Arachis hypogaea HOM05D000771 ORTHO05D001963 5.5e-08 62.8 78 47.4
arahy.Tifrunner.gnm1.ann1.F2LXEC Arachis hypogaea HOM05D000771 ORTHO05D001963 5.5e-08 62.8 78 47.4
Dinv30600 Davidia involucrata HOM05D000771 ORTHO05D001963 5.5e-08 62.8 211 29.4
THA.LOC104813565 Tarenaya hassleriana HOM05D000771 ORTHO05D001963 5.5e-08 62.8 117 41.0
TAR625G0253 Trochodendron aralioides HOM05D000771 ORTHO05D001963 5.5e-08 62.8 88 40.9
Ca_01584_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000543 7.2e-08 62.4 116 38.8
Cc04_g04330 Coffea canephora HOM05D000771 ORTHO05D001963 7.2e-08 62.4 220 32.7
Migut.D01073 Erythranthe guttata HOM05D000771 ORTHO05D001963 7.2e-08 62.4 121 38.8
Sopen12g004580 Solanum pennellii HOM05D000771 ORTHO05D001963 7.2e-08 62.4 163 33.7
MD17G1210700 Malus domestica HOM05D000771 ORTHO05D001963 9.4e-08 62.0 256 27.7
Sc18g0000480 Simmondsia chinensis HOM05D000771 ORTHO05D001963 1.2e-07 61.6 89 40.4
TAR636G0018 Trochodendron aralioides HOM05D000771 ORTHO05D001963 1.2e-07 61.6 227 29.1
Actinidia01750 Actinidia chinensis HOM05D000771 ORTHO05D001963 1.6e-07 61.2 331 26.9
Lalb_Chr13g0301751 Lupinus albus HOM05D000771 ORTHO05D001963 1.6e-07 61.2 161 34.2
FAN09G0010 Fragaria x ananassa HOM05D000771 ORTHO05D001963 2.1e-07 60.8 296 26.4
Lalb_Chr08g0234701 Lupinus albus HOM05D000771 ORTHO05D001963 2.1e-07 60.8 274 26.6
AL3G28450 Arabidopsis lyrata HOM05D000771 ORTHO05D001963 2.7e-07 60.5 223 28.7
A08p31650 Brassica napus HOM05D000771 ORTHO05D001963 2.7e-07 60.5 127 35.4
CARHR090880 Cardamine hirsuta HOM05D000771 ORTHO05D001963 2.7e-07 60.5 100 40.0
MELO3C010329.2 Cucumis melo HOM05D000771 ORTHO05D001963 2.7e-07 60.5 119 38.7
CsaV3_4G001590 Cucumis sativus L. HOM05D000771 ORTHO05D001963 2.7e-07 60.5 342 24.9
Migut.D02387 Erythranthe guttata HOM05D000771 ORTHO05D001963 2.7e-07 60.5 115 36.5
Medtr0339s0020 Medicago truncatula HOM05D000771 ORTHO05D001963 2.7e-07 60.5 220 29.5
RcHm_v2.0_Chr2g0135641 Rosa chinensis HOM05D000771 ORTHO05D001963 2.7e-07 60.5 304 25.3
SalBow6G3004 Salvia bowleyana HOM05D000771 ORTHO05D001963 2.7e-07 60.5 196 28.1
VMungo1309G1072 Vigna mungo HOM05D000771 ORTHO05D001963 2.7e-07 60.5 297 27.9
BraA08t35086Z Brassica rapa HOM05D000771 ORTHO05D001963 3.6e-07 60.1 158 31.6
Nitab4.5_0011590g0010 Nicotiana tabacum HOM05D000771 ORTHO05D001963 4.7e-07 59.7 85 43.5
MSTRG.4709 Avicennia marina HOM05D000771 ORTHO05D001963 6.1e-07 59.3 288 27.4
BcaC07g38778 Brassica carinata HOM05D000771 ORTHO05D001963 6.1e-07 59.3 115 35.7
C08p17100 Brassica napus HOM05D000771 ORTHO05D001963 6.1e-07 59.3 115 35.7
BolC8t49336H Brassica oleracea HOM05D000771 ORTHO05D001963 6.1e-07 59.3 115 35.7
Peaxi162Scf00332g00710 Petunia axillaris HOM05D000771 ORTHO05D001963 6.1e-07 59.3 86 40.7
SGA_v2.0_scaffold22G09811 Striga asiatica HOM05D000771 ORTHO05D001963 6.1e-07 59.3 166 31.9
Nn2g12067 Nelumbo nucifera HOM05D000771 ORTHO05D001963 8.0e-07 58.9 130 32.3
Aqoxy1G00618 Aquilegia oxysepala HOM05D000771 ORTHO05D001963 1.0e-06 58.5 129 33.3
BcaB03g13067 Brassica carinata HOM05D000771 ORTHO05D001963 1.0e-06 58.5 123 35.8
CDE07G0474 Ceratophyllum demersum HOM05D000771 ORTHO05D001963 1.0e-06 58.5 286 22.7
Gorai.010G062800 Gossypium raimondii HOM05D000771 ORTHO05D001963 1.0e-06 58.5 305 26.2
Hund09261 Selenicereus undatus HOM05D000771 ORTHO05D001963 1.0e-06 58.5 359 27.0
Atru.chr7.1127 Acer truncatum HOM05D000771 ORTHO05D001963 1.4e-06 58.2 122 35.2
BcaC05g25494 Brassica carinata HOM05D000771 ORTHO05D001963 1.4e-06 58.2 163 31.9
Gohir.D09G085200 Gossypium hirsutum HOM05D000771 ORTHO05D001963 1.4e-06 58.2 93 38.7
Gorai.006G101100 Gossypium raimondii HOM05D000771 ORTHO05D001963 1.4e-06 58.2 93 38.7
CSS0032303 Camellia sinensis var. sinensis HOM05D000771 ORTHO05D001963 1.8e-06 57.8 227 32.2
Sopen07g004040 Solanum pennellii HOM05D000771 ORTHO05D001963 1.8e-06 57.8 103 39.8
SGA_v2.0_scaffold100G29612 Striga asiatica HOM05D000771 ORTHO05D001963 1.8e-06 57.8 214 27.6
TWI75G0465 Tripterygium wilfordii HOM05D000771 ORTHO05D001963 1.8e-06 57.8 107 39.3
CARHR015870 Cardamine hirsuta HOM05D000771 ORTHO05D001963 2.3e-06 57.4 138 32.6
MD00G1123000 Malus domestica HOM05D000771 ORTHO05D001963 2.3e-06 57.4 138 33.3
PSO170G3994 Papaver somniferum HOM05D000771 ORTHO05D001963 2.3e-06 57.4 137 35.0
Sp1g13660 Schrenkiella parvula HOM05D000771 ORTHO05D001963 2.3e-06 57.4 170 31.2
Carub.0003s1553 Capsella rubella HOM05D000771 ORTHO05D001963 3.0e-06 57.0 219 27.9
ClCG06G011310 Citrullus lanatus HOM05D000771 ORTHO05D001963 3.0e-06 57.0 218 29.8
Oeu051471.1 Olea europaea HOM05D000771 ORTHO05D001963 3.0e-06 57.0 86 39.5
TPR.G38670 Trifolium pratense HOM05D000771 ORTHO05D001963 3.0e-06 57.0 295 27.5
FAN14G2647 Fragaria x ananassa HOM05D000771 ORTHO05D001963 4.0e-06 56.6 45 55.6
Lsat_1_v5_gn_7_43581 Lactuca sativa HOM05D000771 ORTHO05D001963 4.0e-06 56.6 248 29.0
Psat7g256600 Pisum sativum HOM05D000771 ORTHO05D001963 4.0e-06 56.6 107 38.3
SGA_v2.0_scaffold117G32356 Striga asiatica HOM05D000771 ORTHO05D001963 4.0e-06 56.6 334 26.3
Thecc.06G022500 Theobroma cacao HOM05D000771 ORTHO05D001963 4.0e-06 56.6 317 26.5
Medtr6g060685 Medicago truncatula HOM05D000771 ORTHO05D001963 5.2e-06 56.2 96 42.7
Medtr6g060845 Medicago truncatula HOM05D000771 ORTHO05D001963 5.2e-06 56.2 96 42.7
Medtr6g060860 Medicago truncatula HOM05D000771 ORTHO05D001963 5.2e-06 56.2 96 42.7
Oeu027808.1 Olea europaea HOM05D000020 ORTHO05D000543 5.2e-06 56.2 217 30.9
CAN.G1922.1 Capsicum annuum HOM05D000771 ORTHO05D001963 6.7e-06 55.8 289 24.2
FAN05G2834 Fragaria x ananassa HOM05D000771 ORTHO05D001963 6.7e-06 55.8 297 26.3
Sed0013491 Sechium edule HOM05D000020 ORTHO05D000543 6.7e-06 55.8 324 26.5
Solyc07g008170.2 Solanum lycopersicum HOM05D000771 ORTHO05D001963 6.7e-06 55.8 116 35.3
MELO3C017880.2 Cucumis melo HOM05D000020 ORTHO05D000543 8.8e-06 55.5 297 25.6
MELO3C023419.2 Cucumis melo HOM05D000771 ORTHO05D001963 8.8e-06 55.5 110 38.2
Hma1.2p1_0101F.1_g049630 Hydrangea macrophylla HOM05D000771 ORTHO05D001963 8.8e-06 55.5 326 24.8
Oeu042100.2 Olea europaea HOM05D000771 ORTHO05D001963 8.8e-06 55.5 91 40.7
Solyc06g068140.3 Solanum lycopersicum HOM05D000771 ORTHO05D001963 8.8e-06 55.5 346 25.7


User provided reference genes

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